BAC Information

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BAC

Clone NameB6Ng01-201K21
Chromosome11 (Build37)
Map Location 88,475,906 - 88,476,334
singlet/doubletsinglet
Overlap genenone
Upstream geneRnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464, Dynll2, Sfrs1, Vezf1, Cuedc1, Mrps23, 1700106J16Rik, LOC668793, Msi2
Downstream geneLOC100038945, Akap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525, LOC100039114, Nog, LOC100039047, 4932411E22Rik, Ankfn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201K21.bB6Ng01-201K21.g
ACCGA022384GA022385
length478423
definitionB6Ng01-201K21.b B6Ng01-201K21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattccattttcgtcctttgtttagaatcaacacatatgaattttatt
attgtcctagtcattgtcttattgctgtgaacagacactaggaccaagtc
aaatatgaaagaaaacatttaattgggagctcgattacagttttagaggt
ttagtccattatcatcatgactgggaacatcatagtacacataggtggca
ctggagcagtagctgagagctacatcttgatccataggcagagagaatga
ggggggggggtgctgggagagacagacagacagacagagacacagagaca
cagacacagacactctgggcttttgaaacctcaaagcccacccccagtga
cagacttcctccaacaatgtcccacctcctaattcttctaatcctttcaa
atagtaccacctcctggtgactaagcattcaagtatatcaacctatgggg
accattctaattttaaaccatggcaatt
tgtcttggtttcgtttcgtcttttttatttttttattttttgcaatcagc
taatcaatatgcactatatattcagaaaaactgtcctcattcttgagcaa
acaattgcaaactatgatctgaaacatgccctcacctggaactgaatgtg
gcctatgaaagaaaggacccacaatgataagagtacgcaggcagggtgaa
gaatcgctggtgttcctctagaaacaggtagcaatactggtttcggtctc
gtttatatttttaacatcagaaagtacctgttgcttctttgtatgatgaa
ataaatagagaacaggtgtggtgtgcttttctgtttatccgaacctacta
agaacagagctgcagggggatgggaacacgctgataagcttgctggtagt
gaatacgaaggggggggggggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_88475906_88476334
seq2: B6Ng01-201K21.g_68_496

seq1  GAATTCTGTCTTGGTTTCGTTTCGTCTTTTTTATTTTTTTATTTTTTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTTGGTTTCGTTTCGTCTTTTTTATTTTTTTATTTTTTGCA  50

seq1  ATCAGCTAATCAATATGCACTATATATTCAGAAAAACTGTCCTCATTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTAATCAATATGCACTATATATTCAGAAAAACTGTCCTCATTCTT  100

seq1  GAGCAAACAATTGCAAACTATGATCTGAAACATGCCCTCACCTGGAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAACAATTGCAAACTATGATCTGAAACATGCCCTCACCTGGAACTG  150

seq1  AATGTGGCCTATGAAAGAAAGGACCCACAATGATAAGAGTACGCAGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCCTATGAAAGAAAGGACCCACAATGATAAGAGTACGCAGGCAG  200

seq1  GGTGAAGAATCGCTGGTGTTCCTCTAGAAACAGGTAGCAATACTGGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGAATCGCTGGTGTTCCTCTAGAAACAGGTAGCAATACTGGTTTC  250

seq1  GGTCTCGTTTATATTTTTAACATCAGAAAGTACCTGTTGCTTCTTTGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCGTTTATATTTTTAACATCAGAAAGTACCTGTTGCTTCTTTGTAT  300

seq1  GATGAAATAAATAGAGAACAGGTGTGGTGTGCTTTTCTGTTTATCCGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAATAAATAGAGAACAGGTGTGGTGTGCTTTTCTGTTTATCCGAAC  350

seq1  CTACTAAGAACAGAGCTGCAGGGGGATGGGAACACGCTGATAAGCTTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAAGAACAGAGCTGCAGGGGGATGGGAACACGCTGATAAGCTTGCT  400

seq1  GGTAGTGAATACGAAGGGGGGGGGGGGCC  429
      |||||||||||||||||||||||||||||
seq2  GGTAGTGAATACGAAGGGGGGGGGGGGCC  429