BAC Information

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BAC

Clone NameB6Ng01-201O02
Chromosome11 (Build37)
Map Location 30,701,858 - 30,702,925
singlet/doubletsinglet
Overlap genePsme4
Upstream geneC230094A16Rik, 4931440F15Rik, Spnb2, EG666427, LOC666432, 4930505A04Rik, Acyp2, LOC654445, LOC666452, LOC666470, LOC631243
Downstream geneGpr75, LOC100042469, 4933407N01Rik, Asb3, Chac2, Stc2, 2310022M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201O02.bB6Ng01-201O02.g
ACCGA022531GA022532
length1,0721,142
definitionB6Ng01-201O02.b B6Ng01-201O02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaactgaaagaagatccaagcgctgtgctatttgttcccgtgat
aaaaagtgtttattgggtattgtaagcacacagaaataattgaactgtcc
ctgcagatttgaatagctctattagaagcacattaggtatcttgactaat
aagtacagccatgggattcaggaagcttcaaatgtagagaaaagtttatg
ctcaatatactatgtttcttaattgtttggtatttttgtgtgtgaaaatc
accccgagttacttgctgaccctcaccccaagtgtgaaagtgaaagatga
tgactaaagtagttagtaatgaggctgcagtttctttctaggttgatgtt
aatatattaggtgcttgtctgagtttgttccttggaattttcttatagtt
tagttcttaagctttcagagaaattgtacagacctctggatttgaagaat
tttaaaaggtttaatgataaaatttctgaaaccttaacacccctgtcctt
cacttgaattttgaacatttttgtgtttctatttgtgtttatcataccat
atttcattatatcacagttcatattttgatgcaaaagcactataataaaa
attattctttagagttttcagccattgggcttactttgtatgtgtttaat
atggtattgttatctactttgtaaagattgaaaggggtttatcttttttt
ctggtatagtgttttatttcgttttacttatcatacacagatacaaagaa
caaaatgagggtagaggaaaaaaagcagatgaggaagtctaggtagataa
ttcttgtaattctgtatgtagcagagaagatttaggaattaaatatagac
agataatatgaacctgtgtgttatctttgaggtacaggttatagaattaa
ctgtgttctttaaatacaaccaatgtaatttatcaactggccttttttct
cctctaggtctattagaaaaatgtttctcaacaattggttgaaaagctgc
cgaacgtaagtagcactcaatttatgaagcctcttgtttaccgttagcct
tcccccatctttgagtgttctt
gaattctttgtttaactctgtaccccatttttaatagggttacttggttt
cctggggtctaacttcttgagttctttgtatatattggatattagcactt
tatcagatttaggattggtaaaatcttttcccaatctgttgtttttgtct
tattgacagtgtcctttgccttacagaagctttgcaattttataaggtcc
cctatgtcaattcttgatcttacagcacaagccattggtgttctcttcag
gaatttttcccctgtgcccatatctttgaggctcttccctactgtctcct
ctataagtttcagtgtctctggttttatgtggagttccttgacccactta
gacttgagctttgtacaaggagataggaatggatcaatttacattcttct
acatgctgactatcagttgagccagcaccatttgttgaagatgctgtctt
tttttccctggattgttttagctcctttgtcaaagatcaagtgaccatag
gtgttgaggtcacttctgtgtattcagttctattccactgatctacctgt
ctgtctttgtaccagtaccatgcaggttttatcacaactgctctgtagta
cagctggaggtcaaggatggtgatttcaccagaagttcttttattgttga
gaatagtttttcctatcctgggttttttgttattccagatgaagagttga
gttgaaattttgatggggattgcaatgaataggtagatagctttcagcaa
gatagccatttttactatattaatcctgccaatccatgagcatgggagat
ctttccatctttctgagatcttcttcatttttcttcagagactttgaagc
tcttatcacatagatctttcacttgcttgataagagtcacaccaaagtat
tttatattatttgtgactactgtgaaatatgttgtttccctaatttcttt
tcagccctgttatcctttgtgtagagaaagggcactgattttgtttcagt
taattatatatccagctaccttgctgagttgttaacagaattaagagttc
tcctggtgaattttgggcactgcatatactacccaatcatctgccaagag
gaaaactgcatcttctttcccaatgattccgttgtacctcgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_30701858_30702925
seq2: B6Ng01-201O02.b_44_1115

seq1  GAATTCAAACTGAAAGAAGATCCAAGCGCTGTGCTATTTGTTCCCGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTGAAAGAAGATCCAAGCGCTGTGCTATTTGTTCCCGTGAT  50

seq1  AAAAAGTGTTTATTGGGTATTGTAAGCACACAGAAATAATTGAACTGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGTTTATTGGGTATTGTAAGCACACAGAAATAATTGAACTGTCC  100

seq1  CTGCAGATTTGAATAGCTCTATTAGAAGCACATTAGGTATCTTGACTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGATTTGAATAGCTCTATTAGAAGCACATTAGGTATCTTGACTAAT  150

seq1  AAGTACAGCCATGGGATTCAGGAAGCTTCAAATGTAGAGAAAAGTTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAGCCATGGGATTCAGGAAGCTTCAAATGTAGAGAAAAGTTTATG  200

seq1  CTCAATATACTATGTTTCTTAATTGTTTGGTATTTTTGTGTGTGAAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATATACTATGTTTCTTAATTGTTTGGTATTTTTGTGTGTGAAAATC  250

seq1  ACCCCGAGTTACTTGCTGACCCTCACCCCAAGTGTGAAAGTGAAAGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCGAGTTACTTGCTGACCCTCACCCCAAGTGTGAAAGTGAAAGATGA  300

seq1  TGACTAAAGTAGTTAGTAATGAGGCTGCAGTTTCTTTCTAGGTTGATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAAAGTAGTTAGTAATGAGGCTGCAGTTTCTTTCTAGGTTGATGTT  350

seq1  AATATATTAGGTGCTTGTCTGAGTTTGTTCCTTGGAATTTTCTTATAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTAGGTGCTTGTCTGAGTTTGTTCCTTGGAATTTTCTTATAGTT  400

seq1  TAGTTCTTAAGCTTTCAGAGAAATTGTACAGACCTCTGGATTTGAAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTAAGCTTTCAGAGAAATTGTACAGACCTCTGGATTTGAAGAAT  450

seq1  TTTAAAAGGTTTAATGATAAAATTTCTGAAACCTTAACACCCCTGTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGGTTTAATGATAAAATTTCTGAAACCTTAACACCCCTGTCCTT  500

seq1  CACTTGAATTTTGAACATTTTTGTGTTTCTATTTGTGTTTATCATACCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAATTTTGAACATTTTTGTGTTTCTATTTGTGTTTATCATACCAT  550

seq1  ATTTCATTATATCACAGTTCATATTTTGATGCAAAAGCACTATAATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTATATCACAGTTCATATTTTGATGCAAAAGCACTATAATAAAA  600

seq1  ATTATTCTTTAGAGTTTTCAGCCATTGGGCTTACTTTGTATGTGTTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTTTAGAGTTTTCAGCCATTGGGCTTACTTTGTATGTGTTTAAT  650

seq1  ATGGTATTGTTATCTACTTTGTAAAGATTGAAAGGGGTTTATCTTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATTGTTATCTACTTTGTAAAGATTGAAAGGGGTTTATCTTTTTTT  700

seq1  CTGGTATAGTGTTTTATTTCGTTTTACTTATCATACACAGATACAAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATAGTGTTTTATTTCGTTTTACTTATCATACACAGATACAAAGAA  750

seq1  CAAAATGAGGGTAGAGGAAAAAAAGCAGATGAGGAAGTCTAGGTAGATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGAGGGTAGAGGAAAAAAAGCAGATGAGGAAGTCTAGGTAGATAA  800

seq1  TTCTTGTAATTCTGTATGTAGCAGAGAAGATTTAGGAATTAAATATAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTAATTCTGTATGTAGCAGAGAAGATTTAGGAATTAAATATAGAC  850

seq1  AGATAATATGAACCTGTGTGTTTATCTTTGAGGTACAGGTTATAGAATTA  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGATAATATGAACCTGTGTG-TTATCTTTGAGGTACAGGTTATAGAATTA  899

seq1  ACTGTGTTCTTTAAATAC-ACCAATGTAATTTATCAACTGG-CTTTTTTC  948
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  ACTGTGTTCTTTAAATACAACCAATGTAATTTATCAACTGGCCTTTTTTC  949

seq1  TCCTCTAGTTCTA-TAG-AAAATG-TTCTCAAAACACTGG-TGAAAAGCT  994
      |||||||| |||| ||| |||||| ||||||| | | ||| |||||||||
seq2  TCCTCTAGGTCTATTAGAAAAATGTTTCTCAACA-ATTGGTTGAAAAGCT  998

seq1  GCCGACCGTAAGTAGCACTCAATTTATAAAGCCTCTTGTTTTACCTGTAG  1044
      ||||| ||||||||||||||||||||| |||||||||| ||||||  |||
seq2  GCCGAACGTAAGTAGCACTCAATTTATGAAGCCTCTTG-TTTACCGTTAG  1047

seq1  CCTTCCCCCATCTTT-AGTGTTCTT  1068
      ||||||||||||||| |||||||||
seq2  CCTTCCCCCATCTTTGAGTGTTCTT  1072