BAC Information

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BAC

Clone NameB6Ng01-202G21
Chromosome11 (Build37)
Map Location 6,486,587 - 6,604,264
singlet/doubletdoublet
Overlap geneCcm2, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314
Upstream geneAnkrd36, LOC665181, Mrps24, 2010005J08Rik, 2210015D19Rik, Dbnl, Pgam2, Polm, Aebp1, Pold2, Myl7, Gck, Ykt6, Camk2b, LOC100042156, Nudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, LOC665327
Downstream geneLOC626419, LOC665339, LOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202G21.bB6Ng01-202G21.g
ACCGA022923GA022924
length2941,115
definitionB6Ng01-202G21.b B6Ng01-202G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,603,971 - 6,604,264)(6,486,587 - 6,487,697)
sequence
ctgtgctgagtagggatgggaagaggacaaagtcccgagtgaatgtgtat
agttgacgaaggcacagctatgtcgaggatctatgggaatggcgaggcct
tccctaggtcaggctcagggacttcctcctccaggaagtgactgcagcct
gagacttctcccctacagagatcagctagcccacctcctcactatgctgc
atataatagatgcgctgagtttttgcactgcttgctggtgtgtctccatc
agagtgcatggtgcacaggatcccagcctttgcggggggggggg
gaattcactctgaggtccagggtagccttgaacttacaacagttctgcct
cagctttctgagtaatggaattacacaagtgagctttttaaaagtggaaa
aggcttgtttggctcttggctaatgaggttccagaccaagagaccgttgc
ttctaggctcggtgcaggtaggaattgtatggcagagcatagctgcttgc
ttcacagccagaaagcccaaaaataggaacagggttgggccccatggttt
cttttgatagcatgcccctgtgaccaaagcacttcctaatttttttctca
cttcctggtagcaccacctggaggccaagtctttgtcacttacttagcat
ccaagtcagagtgttttgttttttttctcagggttgagtgagtctgtctg
tttgatgctaggcattgaattaggttaagcagtacgaaattgtcactatt
ttaatctgtaaaaatgtcagtttaacatgactcaaactagtacaaagtat
ctgacatgaactacctcagttagcaactataatatacctaagaggcgtcc
atgagtctccgctcacaagtgggtgaaggtaggtggtcttgaactggttc
cttcctgcttcagacccctgtccagcatcaccaaggtgagcctctggctc
ttgactctcagagaagagagggaggagcctggctcctgatcaggttcctg
tgggtattttaagctgatatgggagaagcgttccctatagttctcatgct
gcagggatgtttctctgcttgaatcagtacaataaattgttaaggaagag
aaaatagaaatttccctccatataaggaacattccaaaaccatgagacac
agtgcagagagtctgctcctctcagcagcagagaatgcatctctgtccca
gggcggcctcgctgtggcaggagtgtgtgtgtatccacccctgatccggg
cttctgggcacaagggctggtttgggttttgggcttgtagtttcctcacc
cagagccagcagatgcattggtaacggctcgctggcacctccttgcatga
ggcaggcaacctgtgcatctctccgttcaggagggttctaggtgtttgag
ccagtcaagtgtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_6603971_6604264
seq2: B6Ng01-202G21.b_48_341 (reverse)

seq1  CCCCCCCCCCCGCAAAGGCTGGGATCCTGTGCACCATGCACTCTGATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCGCAAAGGCTGGGATCCTGTGCACCATGCACTCTGATGGA  50

seq1  GACACACCAGCAAGCAGTGCAAAAACTCAGCGCATCTATTATATGCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACCAGCAAGCAGTGCAAAAACTCAGCGCATCTATTATATGCAGCA  100

seq1  TAGTGAGGAGGTGGGCTAGCTGATCTCTGTAGGGGAGAAGTCTCAGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGGAGGTGGGCTAGCTGATCTCTGTAGGGGAGAAGTCTCAGGCTG  150

seq1  CAGTCACTTCCTGGAGGAGGAAGTCCCTGAGCCTGACCTAGGGAAGGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACTTCCTGGAGGAGGAAGTCCCTGAGCCTGACCTAGGGAAGGCCT  200

seq1  CGCCATTCCCATAGATCCTCGACATAGCTGTGCCTTCGTCAACTATACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATTCCCATAGATCCTCGACATAGCTGTGCCTTCGTCAACTATACAC  250

seq1  ATTCACTCGGGACTTTGTCCTCTTCCCATCCCTACTCAGCACAG  294
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTCGGGACTTTGTCCTCTTCCCATCCCTACTCAGCACAG  294

seq1: chr11_6486587_6487697
seq2: B6Ng01-202G21.g_67_1181

seq1  GAATTCACTCTGAGGTCCAGGGTAGCCTTGAACTTACAACAGTTCTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGAGGTCCAGGGTAGCCTTGAACTTACAACAGTTCTGCCT  50

seq1  CAGCTTTCTGAGTAATGGAATTACACAAGTGAGCTTTTTAAAAGTGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTCTGAGTAATGGAATTACACAAGTGAGCTTTTTAAAAGTGGAAA  100

seq1  AGGCTTGTTTGGCTCTTGGCTAATGAGGTTCCAGACCAAGAGACCGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGTTTGGCTCTTGGCTAATGAGGTTCCAGACCAAGAGACCGTTGC  150

seq1  TTCTAGGCTCGGTGCAGGTAGGAATTGTATGGCAGAGCATAGCTGCTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGCTCGGTGCAGGTAGGAATTGTATGGCAGAGCATAGCTGCTTGC  200

seq1  TTCACAGCCAGAAAGCCCAAAAATAGGAACAGGGTTGGGCCCCATGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCCAGAAAGCCCAAAAATAGGAACAGGGTTGGGCCCCATGGTTT  250

seq1  CTTTTGATAGCATGCCCCTGTGACCAAAGCACTTCCTAATTTTTTTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATAGCATGCCCCTGTGACCAAAGCACTTCCTAATTTTTTTCTCA  300

seq1  CTTCCTGGTAGCACCACCTGGAGGCCAAGTCTTTGTCACTTACTTAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGTAGCACCACCTGGAGGCCAAGTCTTTGTCACTTACTTAGCAT  350

seq1  CCAAGTCAGAGTGTTTTGTTTTTTTTCTCAGGGTTGAGTGAGTCTGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCAGAGTGTTTTGTTTTTTTTCTCAGGGTTGAGTGAGTCTGTCTG  400

seq1  TTTGATGCTAGGCATTGAATTAGGTTAAGCAGTACGAAATTGTCACTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGCTAGGCATTGAATTAGGTTAAGCAGTACGAAATTGTCACTATT  450

seq1  TTAATCTGTAAAAATGTCAGTTTAACATGACTCAAACTAGTACAAAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTGTAAAAATGTCAGTTTAACATGACTCAAACTAGTACAAAGTAT  500

seq1  CTGACATGAACTACCTCAGTTAGCAACTATAATATACCTAAGAGGCGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATGAACTACCTCAGTTAGCAACTATAATATACCTAAGAGGCGTCC  550

seq1  ATGAGTCTCCGCTCACAAGTGGGTGAAGGTAGGTGGTCTTGAACTGGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCTCCGCTCACAAGTGGGTGAAGGTAGGTGGTCTTGAACTGGTTC  600

seq1  CTTCCTGCTTCAGACCCCTGTCCAGCATCACCAAGGTGAGCCTCTGGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGCTTCAGACCCCTGTCCAGCATCACCAAGGTGAGCCTCTGGCTC  650

seq1  TTGACTCTCAGAGAAGAGAGGGAGGAGCCTGGCTCCTGATCAGGTTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCTCAGAGAAGAGAGGGAGGAGCCTGGCTCCTGATCAGGTTCCTG  700

seq1  TGGGTATTTTAAGCTGATAT-GGAGAAGCGTTCCCTATAGTTCTCATGCT  749
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGGGTATTTTAAGCTGATATGGGAGAAGCGTTCCCTATAGTTCTCATGCT  750

seq1  GCAGGGATGTTTCTCTGCTTGAATCAGTACAATAAATTGTTAAGGAAGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGATGTTTCTCTGCTTGAATCAGTACAATAAATTGTTAAGGAAGAG  800

seq1  AAAATAGAAATTTCCCTCCATATAAGGAACATTCCAAAACCATGAGACAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAAATTTCCCTCCATATAAGGAACATTCCAAAACCATGAGACAC  850

seq1  AGTGCAGAGAGTCTGCTCCTCTCAGCAGCAGAGAATGCATCTCTGTCCCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGAGAGTCTGCTCCTCTCAGCAGCAGAGAATGCATCTCTGTCCCA  900

seq1  GGGCGGCCTCGCTGTGGCAGGAGTGTGTGTGTATCCA-CCCTGATCCGGG  948
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGGCGGCCTCGCTGTGGCAGGAGTGTGTGTGTATCCACCCCTGATCCGGG  950

seq1  CTTCTGGGCACAAGGGCTGGTTTGGGTTTT-GGCTTGTAGTTTCCTCACC  997
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTTCTGGGCACAAGGGCTGGTTTGGGTTTTGGGCTTGTAGTTTCCTCACC  1000

seq1  CAGAGCCAGGCAGATGCATTGGTAAC-GCTCGCTGGGCACCTCCTTGCAT  1046
      |||||||| ||||||||||||||||| ||||||| |||||||||||||||
seq2  CAGAGCCA-GCAGATGCATTGGTAACGGCTCGCT-GGCACCTCCTTGCAT  1048

seq1  GAGGCAGGC-ACCTGTGTATCTCTTCTGTCCAGAGGGTTCTA-GTGTTTG  1094
      ||||||||| ||||||| |||||| |  ||  |||||||||| |||||||
seq2  GAGGCAGGCAACCTGTGCATCTCTCCGTTCAGGAGGGTTCTAGGTGTTTG  1098

seq1  AGGCAGTCAAGTGTGGA  1111
      || ||||||||||||||
seq2  AGCCAGTCAAGTGTGGA  1115