BAC Information

Click to search

BAC

Clone NameB6Ng01-203J03
Chromosome11 (Build37)
Map Location 24,166,475 - 24,167,551
singlet/doubletsinglet
Overlap genenone
Upstream geneXpo1, LOC100042202, Ahsa2, 1700093K21Rik, A730027B03Rik, 0610010F05Rik, Pex13, 4933435A13Rik, Rel, Papolg, A830031A19Rik, LOC100042256, Bcl11a
Downstream geneLOC100042282
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203J03.bB6Ng01-203J03.g
ACCGA023749GA023750
length1,2121,077
definitionB6Ng01-203J03.b B6Ng01-203J03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgcatctatgaggctgcatataccagctccctcaaattaagc
tcaaagctttgtatttgatatgaggttggcttcttctcttctttctctat
tctcctgccttaatctgtccctgagttgtgaagagatgctatgaatacca
catgaactcctataaaggaaagcatttaattggcattggcttacagttca
gaggttcaatccattgtcatcatggtgaagagtatggcagcatgaaggca
gacatgatgttgaagaagcagctgaaagttctatatctaggttcataggc
agcagactttgggcttggaataggctttttgtaaccacaaaacccatccc
aatgacacacttcctccaataaggcttcatctactccaacaagaccacac
ctcctgttccttttaaacagtgccactccctagtatcaagtacacaaatg
gatgagcctatgggaccattctcattcataccactaccactctccatctt
cccttcttcctttccttcctctatatcttcccttcttttgctcctctatt
ttttactcttcctcttcaaaactgggtttcaccttccagttggcaccagc
accgagccacctttggcaagcagtgacacaggaaccccgcccaaccagtg
gctcgggttccttccagtctgcccttgtctaacttggttttgaactcagc
aaaatgccccacggtccccagaggaattaccacttccaggggctctaaca
tgcccagaatcatgggatcccagaattccaggagcttggtcacaccagga
tctcaggatatcagaggaaacttgactgctaagaactctgacacacccag
aacttcagggtcccaaatcacaggatcacagagaaagctggactctgagg
aattctgactcacccaggtttataggaaggaaaggctccaatcagatatt
gagagggcagggagcacttgagatatcagatggcagggacagcataagaa
cagaagcacagaaaccaaggtacttggcatcatcagaacccaactcttcc
caccatagcagtcctgatacaccatccacaccaagaaaagcagaatatga
tctaatgttcacttctccatgataatgattgaagaacatcatagaggacc
taattacctcctaagaattcaggaacccaggtaaaaaatggtataataaa
accttctgatag
gaattctttctgagaaggttgggctgacaggaattaaggaacagtttcca
ccaaccccaagctggacaccaaacagatgtgaatttggtttccttattct
ttagaaggctctccccatcccaagttaatgaactgcaactcctaaggaca
aaatggttgttggctttttctttcctttttaaacctgacttggtaccatt
gagaaattatgaataaatgaacaatacattggaacccctagcttaggcca
tgatacatgagtcagaactccaagatgacaaagccacagaggactctggt
gattcccaagtcactttcccacaaagggcatggcttcttgcagggtgtag
ctggttagaaagggcaacatcagcagtacctgattagaatgagctgtttg
gggcagccctgctgactctctgacctgcccttatagagcagtacttgctg
ttgactctggctggcttgccacccatcagagcaggcaagctgttctcctc
caggaagatttctttctcatgcaatgcagcctgctgttagctccacccta
taggacagtcactcatggagtctgacttttagaattcttggtccctgcaa
agtctgactttttaaaaggcgtcattcgggctgagctcatcccggagctt
gtcttgctttaatttaccctgtttagtttctgttctccagcaacatataa
ccccctttttctacctcactaacctcagtggtagctctccccatgttaaa
caacggtctgatttggcatggagaaaagcagtcagtcgttttctttaatc
ttaatgttttaggccccaggaacatttgaagtacctatttaatgagaaga
cttctggagaagcctaggtaagatcttcaaggctctaattgctccctgga
gatagctgtcaaggccgcatagcctggctcaggtcgtgtctgcggagcaa
cgaagagtaaaaccacggcagagtcggcagcagaggttcaggggcgagaa
tctcccagacctctggccctggaaaggattctgcagtatgcactgtgttg
gtctcctggtgtatacctgcttgcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_24166475_24167551
seq2: B6Ng01-203J03.g_66_1142

seq1  GAATTCTTTCTGAGAAGGTTGGGCTGACAGGAATTAAGGAACAGTTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGAGAAGGTTGGGCTGACAGGAATTAAGGAACAGTTTCCA  50

seq1  CCAACCCCAAGCTGGACACCAAACAGATGTGAATTTGGTTTCCTTATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCCAAGCTGGACACCAAACAGATGTGAATTTGGTTTCCTTATTCT  100

seq1  TTAGAAGGCTCTCCCCATCCCAAGTTAATGAACTGCAACTCCTAAGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGGCTCTCCCCATCCCAAGTTAATGAACTGCAACTCCTAAGGACA  150

seq1  AAATGGTTGTTGGCTTTTTCTTTCCTTTTTAAACCTGACTTGGTACCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTGTTGGCTTTTTCTTTCCTTTTTAAACCTGACTTGGTACCATT  200

seq1  GAGAAATTATGAATAAATGAACAATACATTGGAACCCCTAGCTTAGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATTATGAATAAATGAACAATACATTGGAACCCCTAGCTTAGGCCA  250

seq1  TGATACATGAGTCAGAACTCCAAGATGACAAAGCCACAGAGGACTCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACATGAGTCAGAACTCCAAGATGACAAAGCCACAGAGGACTCTGGT  300

seq1  GATTCCCAAGTCACTTTCCCACAAAGGGCATGGCTTCTTGCAGGGTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCAAGTCACTTTCCCACAAAGGGCATGGCTTCTTGCAGGGTGTAG  350

seq1  CTGGTTAGAAAGGGCAACATCAGCAGTACCTGATTAGAATGAGCTGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTAGAAAGGGCAACATCAGCAGTACCTGATTAGAATGAGCTGTTTG  400

seq1  GGGCAGCCCTGCTGACTCTCTGACCTGCCCTTATAGAGCAGTACTTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCCCTGCTGACTCTCTGACCTGCCCTTATAGAGCAGTACTTGCTG  450

seq1  TTGACTCTGGCTGGCTTGCCACCCATCAGAGCAGGCAAGCTGTTCTCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCTGGCTGGCTTGCCACCCATCAGAGCAGGCAAGCTGTTCTCCTC  500

seq1  CAGGAAGATTTCTTTCTCATGCAATGCAGCCTGCTGTTAGCTCCACCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGATTTCTTTCTCATGCAATGCAGCCTGCTGTTAGCTCCACCCTA  550

seq1  TAGGACAGTCACTCATGGAGTCTGACTTTTAGAATTCTTGGTCCCTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAGTCACTCATGGAGTCTGACTTTTAGAATTCTTGGTCCCTGCAA  600

seq1  AGTCTGACTTTTTAAAAGGCGTCATTCGGGCTGAGCTCATCCCGGAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGACTTTTTAAAAGGCGTCATTCGGGCTGAGCTCATCCCGGAGCTT  650

seq1  GTCTTGCTTTAATTTACCCTGTTTAGTTTCTGTTCTCCAGCAACATATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGCTTTAATTTACCCTGTTTAGTTTCTGTTCTCCAGCAACATATAA  700

seq1  CCCCCTTTTTCTACCTCACTAACCTCAGTGGTAGCTCTCCCCATGTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTTTTCTACCTCACTAACCTCAGTGGTAGCTCTCCCCATGTTAAA  750

seq1  CAACGGTCTGATTTGGCATGGAGAAAAGCAGTCAGTCGTTTTCTTTAAAT  800
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAACGGTCTGATTTGGCATGGAGAAAAGCAGTCAGTCGTTTTCTTT-AAT  799

seq1  CTTAATGTTTTAGGCCCCAGGAACATTTGAAGTACCTATTTAATGAGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGTTTTAGGCCCCAGGAACATTTGAAGTACCTATTTAATGAGAAG  849

seq1  ACTTCTGGAGAAGCCTAGGTAAGATCTTCAAGGCTCTAATTGCTCCCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGGAGAAGCCTAGGTAAGATCTTCAAGGCTCTAATTGCTCCCTGG  899

seq1  AGAAAGCTGTC-AGGCCGCATAGCCTGGCTCAGGTCGTGTCTGCGGAGC-  948
      ||| ||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  AGATAGCTGTCAAGGCCGCATAGCCTGGCTCAGGTCGTGTCTGCGGAGCA  949

seq1  ACGAAGAGTAAAACCACGGCAGAAGTCGGCAGCAGAGGTTCAGGGGCCGA  998
      |||||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  ACGAAGAGTAAAACCACGGCAG-AGTCGGCAGCAGAGGTTCAGGGG-CGA  997

seq1  G-ATCTCCCAGACCTCTGGGCCTGGAAAGGATTTCTGCAGTAATGCACTG  1047
      | ||||||||||||||||| ||||||||||| ||||||||| ||||||||
seq2  GAATCTCCCAGACCTCTGGCCCTGGAAAGGA-TTCTGCAGT-ATGCACTG  1045

seq1  TG-TGGTCTCCT-GTGTATACCTGCTGGCTTG  1077
      || ||||||||| ||||||||||||| |||||
seq2  TGTTGGTCTCCTGGTGTATACCTGCTTGCTTG  1077