BAC Information

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BAC

Clone NameB6Ng01-205F09
Chromosome11 (Build37)
Map Location 84,743,606 - 84,873,768
singlet/doubletdoublet
Overlap geneCar4, Usp32
Upstream geneDdx52, Ap1gbp1, Dusp14, Tada2l, OTTMUSG00000000997, Acaca, LOC100043671, Aatf, Lhx1, Mrm1, BC022224, Ggnbp2, Pigw, Znhit3
Downstream geneLOC668794, LOC234848, 1700125H20Rik, Appbp2, D630032N06Rik, Ppm1d, Bcas3, Tbx2, Tbx4, LOC668751, Brip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205F09.bB6Ng01-205F09.g
ACCGA025046GA025047
length716906
definitionB6Ng01-205F09.b B6Ng01-205F09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,743,606 - 84,744,318)(84,872,870 - 84,873,768)
sequence
gaattctgtaggaacacaaaccccagaggaaggtctctgaccttccatga
tctcaccttcctttccagccggcaactgctatctacaggataggtctggg
aaagtcacaatgtacactgctccatgcacacaccaggcagtgagatggtc
tgtctctgtctgtctgtcttccttcccacaccaccacttccagagataag
acccaatcagctcccatactttcccacagcccttccctcctctgaaggtc
aaacagaaacatcaggattcttcagaaaagggatttacaacttgaggtct
ggactcctgcccttgaattggagtcagacatctgggagtcaccacgtaag
tgttggggattaaacccaggttccccagagcaactcagctcccaagtggc
tgagccgtctctccaacctcttatcccactgtctttcacatcaccacatt
gggtataagtctccgacacacagatctttaggggacaaactacatccaac
cacatatggatctttagcataagccaggagggaatggtgaggtccctaca
gtccacagaatgtgaatccaagtcctctggtgtctgtggggtctggatag
gtggtaggattgtttccagacccctaagaccccagagtaggagctgtagg
actagatgatgcaagatttcaattttacttctcctagacccttttttggg
ggtggggtgggagatc
gaattctatgcataactttttttctatcactttctcctccaacttttcag
ctacttcaacctccctgcagtgacctccattggtaacagagtgcaatctc
tgaatagaaactccttaccttttgcctccttgaaaatgtaggcacaggca
aaagcaggacagtagacatgctcacctgatagtgatcttgatctcaggat
tgaagtcctgcactgcctgttctccagtttctgtgactgcttgatttata
tagttgtataaatagtttctagccatttatggccagaggacaagtctgat
gccagttgctgtttcattatgccccaaaggggacagtcccagagttatat
tttagtatgataactttgagtaccatgcttcactgagaataaaatatctt
catgcttcctaaattttactttaattgcttgggagggagacaaacattta
aaatgattattcaccaggagtgatggcatgtgcctttaatcccagcattt
gggaagcagaggcaggcaggtgtctctgagtttgaggccatcctgttcta
caaagggagttccaggacagccagggctgttatacagaaagatcctatct
caaaagccaaaaggccaaaaaaaggaaaaatgtaaccacacttggagttt
gtctctattcatattcatcctttcatgattttactgtttgtttatcatgc
atattatgttagctgtgtgaattaaatctggtccctgctcttcttatagt
tacttctctaaccaggagagaagatatgcatacaaaattttaaatctaac
gtggaggtttgaacatgactagaataaattagtagtatatgattttagat
tttagcaatcttgctttattgggaaataatgtgggtctttgtaatcaatt
ggtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_84743606_84744318
seq2: B6Ng01-205F09.b_46_760

seq1  GAATTCTGTAGGAACACAAACCCCAGAGGAAGGTCTCTGACCTTCCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGGAACACAAACCCCAGAGGAAGGTCTCTGACCTTCCATGA  50

seq1  TCTCACCTTCCTTTCCAGCCGGCAACTGCTATCTACAGGATAGGTCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCTTCCTTTCCAGCCGGCAACTGCTATCTACAGGATAGGTCTGGG  100

seq1  AAAGTCACAATGTACACTGCTCCATGCACACACCAGGCAGTGAGATGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCACAATGTACACTGCTCCATGCACACACCAGGCAGTGAGATGGTC  150

seq1  TGTCTCTGTCTGTCTGTCTTCCTTCCCACACCACCACTTCCAGAGATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGTCTGTCTGTCTTCCTTCCCACACCACCACTTCCAGAGATAAG  200

seq1  ACCCAATCAGCTCCCATACTTTCCCACAGCCCTTCCCTCCTCTGAAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAATCAGCTCCCATACTTTCCCACAGCCCTTCCCTCCTCTGAAGGTC  250

seq1  AAACAGAAACATCAGGATTCTTCAGAAAAGGGATTTACAACTTGAGGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAACATCAGGATTCTTCAGAAAAGGGATTTACAACTTGAGGTCT  300

seq1  GGACTCCTGCCCTTGAATTGGAGTCAGACATCTGGGAGTCACCACGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCTGCCCTTGAATTGGAGTCAGACATCTGGGAGTCACCACGTAAG  350

seq1  TGTTGGGGATTAAACCCAGGTTCCCCAGAGCAACTCAGCTCCCAAGTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGATTAAACCCAGGTTCCCCAGAGCAACTCAGCTCCCAAGTGGC  400

seq1  TGAGCCGTCTCTCCAACCTCTTATCCCACTGTCTTTCACATCACCACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCGTCTCTCCAACCTCTTATCCCACTGTCTTTCACATCACCACATT  450

seq1  GGGTATAAGTCTCCGACACACAGATCTTTAGGGGACAAACTACATCCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATAAGTCTCCGACACACAGATCTTTAGGGGACAAACTACATCCAAC  500

seq1  CACATATGGATCTTTAGCATAAGCCAGGAGGGAATGGTGAGGTCCCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGGATCTTTAGCATAAGCCAGGAGGGAATGGTGAGGTCCCTACA  550

seq1  GTCCACAGAATGTGAATCCAAGTCCTCTGGTGTCTGTGGGGTCTGGATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACAGAATGTGAATCCAAGTCCTCTGGTGTCTGTGGGGTCTGGATAG  600

seq1  GTGGTAGGATTGTTTCCAGACCCCTAAGACCCCAGAGTAGGAGCTGTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAGGATTGTTTCCAGACCCCTAAGACCCCAGAGTAGGAGCTGTAGG  650

seq1  ACTAGATGATGCAAGATTTCAA-TTTACTTCTCCTAGACCC-TTTTTGGG  698
      |||||||||||||||||||||| |||||||||||||||||| ||||||||
seq2  ACTAGATGATGCAAGATTTCAATTTTACTTCTCCTAGACCCTTTTTTGGG  700

seq1  GGTGGGGTGGGAGAT  713
      |||||||||||||||
seq2  GGTGGGGTGGGAGAT  715

seq1: chr11_84872870_84873768
seq2: B6Ng01-205F09.g_71_976 (reverse)

seq1  AAAACCAATT-ATTACCAAAACCCACATTATTTCCC-ATTAAGC-AGATT  47
      |||||||||| ||||| || |||||||||||||||| || |||| |||||
seq2  AAAACCAATTGATTACAAAGACCCACATTATTTCCCAATAAAGCAAGATT  50

seq1  GCTAAAATCTAAAATCATATACTACTAATTTATTCTAGTCATTTTC-AAC  96
      |||||||||||||||||||||||||||||||||||||||||| ||| |||
seq2  GCTAAAATCTAAAATCATATACTACTAATTTATTCTAGTCATGTTCAAAC  100

seq1  CTCCACCTTAGATTT-AAATTTTGTATGCATATCTTCTCTCCTGGTTAGA  145
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  CTCCACGTTAGATTTAAAATTTTGTATGCATATCTTCTCTCCTGGTTAGA  150

seq1  G-AGTAACTATAAGAAGAGCAGGGACCAGATTTAATTCACACAGCTAACA  194
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAACTATAAGAAGAGCAGGGACCAGATTTAATTCACACAGCTAACA  200

seq1  TAATATGCATGAT-AACAAACAGTAAAATCATGAAAGGATGAATATGAAT  243
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAATATGCATGATAAACAAACAGTAAAATCATGAAAGGATGAATATGAAT  250

seq1  AGAGACAAACTCCAAGTGTGGTTACATTTTTCCTTTTTTTGGCCTTTTGG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAAACTCCAAGTGTGGTTACATTTTTCCTTTTTTTGGCCTTTTGG  300

seq1  CTTTTGAGATAGGATCTTTCTGTATAACAGCCCTGGCTGTCCTGGAACTC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAGATAGGATCTTTCTGTATAACAGCCCTGGCTGTCCTGGAACTC  350

seq1  CCTTTGTAGAACAGGATGGCCTCAAACTCAGAGACACCTGCCTGCCTCTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTAGAACAGGATGGCCTCAAACTCAGAGACACCTGCCTGCCTCTG  400

seq1  CTTCCCAAATGCTGGGATTAAAGGCACATGCCATCACTCCTGGTGAATAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAAATGCTGGGATTAAAGGCACATGCCATCACTCCTGGTGAATAA  450

seq1  TCATTTTAAATGTTTGTCTCCCTCCCAAGCAATTAAAGTAAAATTTAGGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTAAATGTTTGTCTCCCTCCCAAGCAATTAAAGTAAAATTTAGGA  500

seq1  AGCATGAAGATATTTTATTCTCAGTGAAGCATGGTACTCAAAGTTATCAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAAGATATTTTATTCTCAGTGAAGCATGGTACTCAAAGTTATCAT  550

seq1  ACTAAAATATAACTCTGGGACTGTCCCCTTTGGGGCATAATGAAACAGCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATATAACTCTGGGACTGTCCCCTTTGGGGCATAATGAAACAGCA  600

seq1  ACTGGCATCAGACTTGTCCTCTGGCCATAAATGGCTAGAAACTATTTATA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCATCAGACTTGTCCTCTGGCCATAAATGGCTAGAAACTATTTATA  650

seq1  CAACTATATAAATCAAGCAGTCACAGAAACTGGAGAACAGGCAGTGCAGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATATAAATCAAGCAGTCACAGAAACTGGAGAACAGGCAGTGCAGG  700

seq1  ACTTCAATCCTGAGATCAAGATCACTATCAGGTGAGCATGTCTACTGTCC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAATCCTGAGATCAAGATCACTATCAGGTGAGCATGTCTACTGTCC  750

seq1  TGCTTTTGCCTGTGCCTACATTTTCAAGGAGGCAAAAGGTAAGGAGTTTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTGCCTGTGCCTACATTTTCAAGGAGGCAAAAGGTAAGGAGTTTC  800

seq1  TATTCAGAGATTGCACTCTGTTACCAATGGAGGTCACTGCAGGGAGGTTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGAGATTGCACTCTGTTACCAATGGAGGTCACTGCAGGGAGGTTG  850

seq1  AAGTAGCTGAAAAGTTGGAGGAGAAAGTGATAGAAAAAAAGTTATGCATA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCTGAAAAGTTGGAGGAGAAAGTGATAGAAAAAAAGTTATGCATA  900

seq1  GAATTC  899
      ||||||
seq2  GAATTC  906