BAC Information

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BAC

Clone NameB6Ng01-205N13
Chromosome11 (Build37)
Map Location 13,267,023 - 13,268,135
singlet/doubletsinglet
Overlap genenone
Upstream geneCobl, LOC627244
Downstream geneLOC432535
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205N13.bB6Ng01-205N13.g
ACCGA025415GA025416
length1,1051,232
definitionB6Ng01-205N13.b B6Ng01-205N13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaaatccacctgcctctgcctcccaagtgctgggattaaaggc
atgcgccaccacatctggctaaattaaagatatttttaaagtctgaattg
ttcaatccctaatacatacacaatgaaagacagcaagcgtcttgtaactg
attgcgacacaaacatatttctggtttagttttctcaaaaagattttcat
gaaactgaaagtgcaacagagatctaatttaaggataaaattaacaggta
aggagtttttaaatggttgactaggaccatcaaaatgattacaaactaaa
atatcaagtactgatcacatattgtcaaagtttaattgagatgagctctg
aagaagcatatataattcttctaggcctaccttctcttttgaggacacat
tctacaaagctatgtggagaaactacctttaatcagcaacgtcctaatta
ttattatactgttaacaattgaaacataaatttcctttggtactttgcat
cactgagcactgctaacattttgactgatgatctagaatcatcacattat
gatattataaattttgagtttgaggaatttctttttacttgagtatttat
ttacaatatataactagaaaagaaacagaactgtaatgaactcacaacat
aggcttggtgggttttcagctaaggactttcttattggtagatcttgact
gctgtaatgttagtagttctaatgacaactcaaacagaaaagccagtaat
gagcatctgaatatatcaagtttattttaaacaacttactccagcaactt
agatataaaaatgaattatcttatattgctgctttagtcattgagttgta
aacattgcataaaatttccctctgtacacatggtttaaaaaagtggtatt
gaaacaaataaatgttgaaacctttatttgaaacttattattaatgtata
tgatgataagtatgcagactagtatatattgttattcaaaaatagtgaaa
gtcagatggtggctttcaaaaagactctgaatggattgttaacgatattc
tgaaagtcatatctgaagtgttgaactagtcgactgctacttcgggagtt
tagaa
gaattctttgtttagcttttgtactggctagtttgtgtcaacttgacaca
ggttggagttatcacagagaaaggagcttcagttggggaaatgcctccac
gagatccagctgtaaggcattttctcaattagtgatcaagtggggagagc
cctttgtgagtgggaccatccctgggctggtagtcctgggttctataata
gagcaggctgagcaaggcaggggaaacaagccagtaaagaacatccctcc
atggcctctgcatcagctcctgctccctgacctgcttgagttccagtcct
gacttctttcagtgatgaacagcaatgtggaaatgtaagctgaataaacc
ctttcctccccaacctgttccttggtcatggtgtttgtgcaggaatcaaa
accctgactaagacagctctatatcccatttattaataggattatttggt
tttctggagtctaaattcttgagttctttgtatatattggatattatctc
tctttcttgggatccatcccgtatacagttacaacctctctagaaatcag
tttggcagctcctcagactattgggcataatactatctgacaataccact
cctgggcatacacagtaaatgctcctacatgtaataaggacacatgttcc
actttgttcatagcagccttatttataatagtcggaggctggaaagaacc
cagatgtccttcagcagaggaatggatacagaaaatgtggtacatttatt
acacattagcagattcaaaatgaaaatgttttatttaactaaaaaaagaa
aaaaaaaagaaagagagaaagaaagagaaagtgagagaaaggaaggaaaa
gggaagaaaagaaaaaaaagaaaagaaaggaaaggaaaggaaatgagaaa
gaaagaaagaaagaaagaaagaaagagagaaatgaaatgaaaggaaagga
agaaagaaagaaagaaagaagaagtaaattgcaagaaaaaaaccacagag
ttagacttcatgggcaaggggacctgactgtacccaagctgttattcaac
ctgagatccacttctagaattgtggtttttcttttctaactttgggcctg
gctctctttgggaacatgttttctgaaccatactttagtggaatatccgt
tgaaactgtatgacgctccgaagtcgagaatatattctcgcctcaattta
ggataatatatttattccccctctccagatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_13267023_13268135
seq2: B6Ng01-205N13.b_42_1146

seq1  GAATTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGC  50

seq1  ATGCGCCACCACATCTGGCTAAATTAAAGATATTTTTAAAGTCTGAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGCCACCACATCTGGCTAAATTAAAGATATTTTTAAAGTCTGAATTG  100

seq1  TTCAATCCCTAATACATACACAATGAAAGACAGCAAGCGTCTTGTAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCCCTAATACATACACAATGAAAGACAGCAAGCGTCTTGTAACTG  150

seq1  ATTGCGACACAAACATATTTCTGGTTTAGTTTTCTCAAAAAGATTTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCGACACAAACATATTTCTGGTTTAGTTTTCTCAAAAAGATTTTCAT  200

seq1  GAAACTGAAAGTGCAACAGAGATCTAATTTAAGGATAAAATTAACAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGAAAGTGCAACAGAGATCTAATTTAAGGATAAAATTAACAGGTA  250

seq1  AGGAGTTTTTAAATGGTTGACTAGGACCATCAAAATGATTACAAACTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTTTTAAATGGTTGACTAGGACCATCAAAATGATTACAAACTAAA  300

seq1  ATATCAAGTACTGATCACATATTGTCAAAGTTTAATTGAGATGAGCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAGTACTGATCACATATTGTCAAAGTTTAATTGAGATGAGCTCTG  350

seq1  AAGAAGCATATATAATTCTTCTAGGCCTACCTTCTCTTTTGAGGACACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCATATATAATTCTTCTAGGCCTACCTTCTCTTTTGAGGACACAT  400

seq1  TCTACAAAGCTATGTGGAGAAACTACCTTTAATCAGCAACGTCCTAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAAGCTATGTGGAGAAACTACCTTTAATCAGCAACGTCCTAATTA  450

seq1  TTATTATACTGTTAACAATTGAAACATAAATTTCCTTTGGTACTTTGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATACTGTTAACAATTGAAACATAAATTTCCTTTGGTACTTTGCAT  500

seq1  CACTGAGCACTGCTAACATTTTGACTGATGATCTAGAATCATCACATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGCACTGCTAACATTTTGACTGATGATCTAGAATCATCACATTAT  550

seq1  GATATTATAAATTTTGAGTTTGAGGAATTTCTTTTTACTTGAGTATTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTATAAATTTTGAGTTTGAGGAATTTCTTTTTACTTGAGTATTTAT  600

seq1  TTACAATATATAACTAGAAAAGAAACAGAACTGTAATGAACTCACAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATATATAACTAGAAAAGAAACAGAACTGTAATGAACTCACAACAT  650

seq1  AGGCTTGGTGGGTTTTCAGCTAAGGACTTTCTTATTGGTAGATCTTGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGGTGGGTTTTCAGCTAAGGACTTTCTTATTGGTAGATCTTGACT  700

seq1  GCTGTAATGTTAGTAGTTCTAATGACAACTCAAACAGAAAAGCCAGTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAATGTTAGTAGTTCTAATGACAACTCAAACAGAAAAGCCAGTAAT  750

seq1  GAGCATCTGAATATATCAAGTTTATTTTAAACAACTTACTCCAGCAACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCTGAATATATCAAGTTTATTTTAAACAACTTACTCCAGCAACTT  800

seq1  AGATATAAAAATGAATTATCTTATATTGCTGCTTTAGTCATTGAGTTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAAAAATGAATTATCTTATATTGCTGCTTTAGTCATTGAGTTGTA  850

seq1  AACATTGCATAAAATTTCCCTCTGTACACATGGTTTAAAAAAGTGGTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGCATAAAATTTCCCTCTGTACACATGGTTTAAAAAAGTGGTATT  900

seq1  GAAACAAATAAAATGTTGAAACCTTTAATTTGAAAACTTATTATTAATGT  950
      ||||||||| |||||||||||||||| ||||| |||||||||||||||||
seq2  GAAACAAAT-AAATGTTGAAACCTTT-ATTTG-AAACTTATTATTAATGT  947

seq1  ATATGATGATAAAGTATGCAGACTAGTATAATATTGTTATTCAAAAATAT  1000
      |||||||||| |||||||||||||||||| ||||||||||||||||||| 
seq2  ATATGATGAT-AAGTATGCAGACTAGTAT-ATATTGTTATTCAAAAATAG  995

seq1  TG-AAGGCAGATGGTGGCTTTCAAAAAGACTCTGAATGGAATTGTAAAC-  1048
      || ||| |||||||||||||||||||||||||||||||| ||||| ||| 
seq2  TGAAAGTCAGATGGTGGCTTTCAAAAAGACTCTGAATGG-ATTGTTAACG  1044

seq1  ATATTCTTAAAAGTCATAATCTTGAAAGTGTTGAAATAGT-GACACCTAC  1097
      |||||| | |||||||| ||||   |||||||||| |||| |||  ||||
seq2  ATATTC-TGAAAGTCAT-ATCT--GAAGTGTTGAACTAGTCGACTGCTAC  1090

seq1  TTCTGGTGTTTTAGAA  1113
      ||| || | |||||||
seq2  TTCGGGAG-TTTAGAA  1105