BAC Information

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BAC

Clone NameB6Ng01-206A19
Chromosome11 (Build37)
Map Location 81,916,669 - 82,073,475
singlet/doubletdoublet
Overlap geneCcl12, Ccl8, Ccl1
Upstream geneAccn1, 1700071K01Rik, 5530401A14Rik, Ccl2, Ccl7, Ccl11
Downstream geneTmem132e, Cct6b, Ccdc16, Lig3, Rffl, Rad51l3, Fndc8, Nle1, Unc45b, Slfn5, Set8-ps, Slfn9, Slfn8, LOC668706, Slfn10, Slfn2, Slfn1, Slfn4, Slfn3, LOC100043636, LOC435271
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206A19.bB6Ng01-206A19.g
ACCGA025565GA025566
length997783
definitionB6Ng01-206A19.b B6Ng01-206A19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,072,481 - 82,073,475)(81,916,669 - 81,917,445)
sequence
gaattccttccttgccttccttcctcattgggttggtggagattcactgt
ttctgcagagtgcatgtcccagccccctgcggctccctggtcaataagct
ctttaaggagctgaaaagaggcgagatcaatgaagcagccatcgattcca
cctcagtcgccgattagtagcaggaacgcggctggcctagggagcccctt
gctaatgctccacagagattagattaaactggaagcccctagcagcccag
ggcagagtccatcctgctcacaccagggtggtcctgaccctcccttgtca
gggggcctttgctagctagatgagcagcctgcgttcccccagtagtctaa
agaaacctgacctgtcattcctgggctttgatgtaagactgttactttag
ggtccgaccaattccctaataaggcaaacaagccctctgtgatttggagc
cctcctccctctccagcctcccttcacatcacccctcctcttgaccaacc
caacagaacagcctccattcttctaccacacgatcatgcatgccaccctg
ggtcacctgtcacttcttccagaacgttctcactggccctcccctctcac
cactgctaccacaatctgacttaggcagccttccaaggttctttgtgtac
tttctcaggcagagcaaatggcaagaatacactgtaattgcttgttttct
tgtctcccctgattgtatatttgaaccgcctgggagactttaaaaaggac
agatacagatttggttggcccagagttgggtttgggcacgcacacattta
ctacctccctctaggggatcctgaggcatccctggggatggagaaccact
taaataagaagatagggacattgactgatcactgatgctctagggtctag
cacatactgtgccctcagtaagtaagggaaggacaggaaatctggggtga
acctactcagtccctggggcatccttttgtagcagacatcgatctcc
gaattccataaaccacttggataagacgtctcaaaccttcatccttgaac
cttcatgtctaggctgagagttccaaaaactcttacgtatttccccctga
agttccccacgggcagtgtgatatttattatgatatctaaaaagagatgt
ttttaataatttaaacaaacttgcttaaataatatttaatggtatttaag
taatatttgggccaattaaaccgaatctaatttacaaactgtgtgtttgt
ttttataaaaactcagttaaattcctggcagaatgtcagagttctctctt
gcacctgcccatgggttggtgagatccatctatggtgcattagcgtgata
ccagcttttgtattcttagagaatcagtgtttcttctagtggagtgtgtt
ctttctgctgctgtgttcagtgttgttatatggctatggtattttcaaag
aaaaatacttatgtattcttaagtacattactctaattttgggtcatgtt
aagctgaaaggggaaagccagcagcaatgggtaacagtgtgaaggaccat
cctgcaggaatgtcttttggctgggcgggacctgctgaggttcagggaga
atgaggtggggcatgacagtcccctgcaatccctctagctccagtctttc
cattacctgcccatagtcatgagctttctccaagtccatttcttttctca
tttcaccttttttctacggagtcccctttaatgggcctctcacgatgctc
ttgagacttttctaacttccaggggttttccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_82072481_82073475
seq2: B6Ng01-206A19.b_48_1043 (reverse)

seq1  GAGATCGATGTCTGCTACAGAAGGATGCCCCAGGGACTGAGTAGGTTCAC  50
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGATCGATGTCTGCTACAAAAGGATGCCCCAGGGACTGAGTAGGTTCAC  50

seq1  CCCAGATTTCCTGTCCTTTCCTTACTTACTGAGGGCACAGTATGTGCTAG  100
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCCAGATTTCCTGTCCTTCCCTTACTTACTGAGGGCACAGTATGTGCTAG  100

seq1  ACCCTAGAGCATCAGTGATCAGTCAATGTCCCTATCTTCTTATTTAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGAGCATCAGTGATCAGTCAATGTCCCTATCTTCTTATTTAAGTG  150

seq1  GTTCTCCAT-CCCAGGGATGCCTCAGGATCCCCTAGAGGGAGGTAGTAAA  199
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCATCCCCAGGGATGCCTCAGGATCCCCTAGAGGGAGGTAGTAAA  200

seq1  TGTGTGCGTGCCCAAACCCAACTCTGGGCCAACCAAATCTGTATCTGTCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCGTGCCCAAACCCAACTCTGGGCCAACCAAATCTGTATCTGTCC  250

seq1  TTTTTAAAGTCTCCCAGGCGGTTCAAATATACAATCAGGGGAGACAAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGTCTCCCAGGCGGTTCAAATATACAATCAGGGGAGACAAGAA  300

seq1  AACAAGCAATTACAGTGTATTCTTGCCATTTGCTCTGCCTGAGAAAGTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCAATTACAGTGTATTCTTGCCATTTGCTCTGCCTGAGAAAGTAC  350

seq1  ACAAAGAACCTTGGAAGGCTGCCTAAGTCAGATTGTGGTAGCAGTGGTGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAACCTTGGAAGGCTGCCTAAGTCAGATTGTGGTAGCAGTGGTGA  400

seq1  GAGGGGAGGGCCAGTGAGAACGTTCTGGAAGAAGTGACAGGTGACCCAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGGGCCAGTGAGAACGTTCTGGAAGAAGTGACAGGTGACCCAGG  450

seq1  GTGGCATGCATGATCGTGTGGTAGAAGAATGGAGGCTGTTCTGTTGGGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATGCATGATCGTGTGGTAGAAGAATGGAGGCTGTTCTGTTGGGTT  500

seq1  GGTCAAGAGGAGGGGTGATGTGAAGGGAGGCTGGAGAGGGAGGAGGGCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGAGGAGGGGTGATGTGAAGGGAGGCTGGAGAGGGAGGAGGGCTC  550

seq1  CAAATCACAGAGGGCTTGTTTGCCTTATTAGGGAATTGGTCGGACCCTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACAGAGGGCTTGTTTGCCTTATTAGGGAATTGGTCGGACCCTAA  600

seq1  AGTAACAGTCTTACATCAAAGCCCAGGAATGACAGGTCAGGTTTCTTTAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAGTCTTACATCAAAGCCCAGGAATGACAGGTCAGGTTTCTTTAG  650

seq1  ACTACTGGGGGAACGCAGGCTGCTCATCTAGCTAGCAAAGGCCCCCTGAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGGGGGAACGCAGGCTGCTCATCTAGCTAGCAAAGGCCCCCTGAC  700

seq1  AAGGGAGGGTCAGGACCACCCTGGTGTGAGCAGGATGGACTCTGCCCTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGGTCAGGACCACCCTGGTGTGAGCAGGATGGACTCTGCCCTGG  750

seq1  GCTGCTAGGGGCTTCCAGTTTAATCTAATCTCTGTGGAGCATTAGCAAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTAGGGGCTTCCAGTTTAATCTAATCTCTGTGGAGCATTAGCAAGG  800

seq1  GGCTCCCTAGGCCAGCCGCGTTCCTGCTACTAATCGGCGACTGAGGTGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCCTAGGCCAGCCGCGTTCCTGCTACTAATCGGCGACTGAGGTGGA  850

seq1  ATCGATGGCTGCTTCATTGATCTCGCCTCTTTTCAGCTCCTTAAAGAGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATGGCTGCTTCATTGATCTCGCCTCTTTTCAGCTCCTTAAAGAGCT  900

seq1  TATTGACCAGGGAGCCGCAGGGGGCTGGGACATGCACTCTGCAGAAACAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACCAGGGAGCCGCAGGGGGCTGGGACATGCACTCTGCAGAAACAG  950

seq1  TGAATCTCCACCAACCCAATGAGGAAGGAAGGCAAGGAAGGAATTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTCCACCAACCCAATGAGGAAGGAAGGCAAGGAAGGAATTC  996

seq1: chr11_81916669_81917445
seq2: B6Ng01-206A19.g_66_848

seq1  GAATTCCATAAACCACTTGGATAAGACGTCTCAAACCTTCATCCTTGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAACCACTTGGATAAGACGTCTCAAACCTTCATCCTTGAAC  50

seq1  CTTCATGTCTAGGCTGAGAGTTCCAAAAACTCTTACGTATTTCCCCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGTCTAGGCTGAGAGTTCCAAAAACTCTTACGTATTTCCCCCTGA  100

seq1  AGTTCCCCACGGGCAGTGTGATATTTATTATGATATCTAAAAAGAGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCCACGGGCAGTGTGATATTTATTATGATATCTAAAAAGAGATGT  150

seq1  TTTTAATAATTTAAACAAACTTGCTTAAATAATATTTAATGGTATTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATAATTTAAACAAACTTGCTTAAATAATATTTAATGGTATTTAAG  200

seq1  TAATATTTGGGCCAATTAAACCGAATCTAATTTACAAACTGTGTGTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTGGGCCAATTAAACCGAATCTAATTTACAAACTGTGTGTTTGT  250

seq1  TTTTATAAAAACTCAGTTAAATTCCTGGCAGAATGTCAGAGTTCTCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAAAAACTCAGTTAAATTCCTGGCAGAATGTCAGAGTTCTCTCTT  300

seq1  GCACCTGCCCATGGGTTGGTGAGATCCATCTATGGTGCATTAGCGTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGCCCATGGGTTGGTGAGATCCATCTATGGTGCATTAGCGTGATA  350

seq1  CCAGCTTTTGTATTCTTAGAGAATCAGTGTTTCTTCTAGTGGAGTGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTTTGTATTCTTAGAGAATCAGTGTTTCTTCTAGTGGAGTGTGTT  400

seq1  CTTTCTGCTGCTGTGTTCAGTGTTGTTATATGGCTATGGTATTTTCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCTGCTGTGTTCAGTGTTGTTATATGGCTATGGTATTTTCAAAG  450

seq1  AAAAATACTTATGTATTCTTAAGTACATTACTCTAATTTTGGGTCATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACTTATGTATTCTTAAGTACATTACTCTAATTTTGGGTCATGTT  500

seq1  AAGCTGAAAGGGGAAAGCCAGCAGCAATGGGTAACAGTGTGAAGGACCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAAAGGGGAAAGCCAGCAGCAATGGGTAACAGTGTGAAGGACCAT  550

seq1  CCTGCAGGAATGTCTTTTGGCTGGGCGGGACCTGCTGAGGTTCAGGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGGAATGTCTTTTGGCTGGGCGGGACCTGCTGAGGTTCAGGGAGA  600

seq1  ATGAGGTGGGGCATGACAGT-CCCTGCAATCCCTCTAGCTCCAGTCTTTC  649
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATGAGGTGGGGCATGACAGTCCCCTGCAATCCCTCTAGCTCCAGTCTTTC  650

seq1  CATTACCTGCCCATAGTCATGAGC-TTCTCCAAGTCCATTTCTTTTCTCA  698
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CATTACCTGCCCATAGTCATGAGCTTTCTCCAAGTCCATTTCTTTTCTCA  700

seq1  TTTCACCTTTTTTCTACGGAGTCCCC-TTAAT-GGCCTCTCACGATGCTC  746
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  TTTCACCTTTTTTCTACGGAGTCCCCTTTAATGGGCCTCTCACGATGCTC  750

seq1  TTGAGACTTTTCTAAC-TCCA-GGGTTTTCCCA  777
      |||||||||||||||| |||| |||||||||||
seq2  TTGAGACTTTTCTAACTTCCAGGGGTTTTCCCA  783