BAC Information

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BAC

Clone NameB6Ng01-207I09
Chromosome3 (Build37)11 (Build37)
Map Location 123,127,774 - 123,127,843101,293,031 - 101,294,001
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneBcar3, Fnbp1l, Ppia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2, Synpo2, Sec24d, G430022H21Rik
Downstream genePrss12, EG668804, Ndst3, LOC100043333, EG668809, Tram1l1, LOC100043740, 1700006A11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207I09.bB6Ng01-207I09.g
ACCGA026649GA026650
length236970
definitionB6Ng01-207I09.b B6Ng01-207I09.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(123,127,774 - 123,127,843)(101,293,031 - 101,294,001)
sequence
aaaggttttttgatcatagtggaacacgtgaccctatggcttggtggggc
atcttttgggtatattcccaagagtggtattttctgaggaacctccagat
tgatttccagagatatagtacccttatttgtgatagctagaagctggaca
caacccagatgtcccacaacagaagaatggatacagaaaatgtggttaat
ttacacaatggaatactactcagctattaagaacaa
gaattcagttctaggtcagcctgttatatagtgtgagttccaggctggcc
tacctagtaagacctctcaggtatgccacagtaggatggaaagaacatga
tctgaaggtgcttcaggaccaccgctggcctcatggccttgagcagattt
ctccccgttagtcttactggggatgatccactcctcgcctacttagcaaa
tattattgagccagctgtgctgcaccaggcacctctcacacagggaagca
caataatttatagcattctgatcatggagtagacaccattaactttattt
ttcctgtaaaaatctactgtgagggggataaatacatgtcttgcttttgt
aacttctgacgacagatgaagtgggaagccccctgcagacaggtggacac
tgtgagtgccaagccagcgggaaggtgggaatcggctccaccagggtggg
tggcagtacactgcccccaggacccggcaaaggtaagtatggctcctgga
acgcacaggctacaaaagcagaaagtgcaaggtgaatcaagagttcaagg
ccaatctgaactacatattgagagcctgtctggcaaaaggaagggacagt
gagattgtctcagcaggtgttggcacttgctgccaagcctgaggacatga
gttggttcccagggacttacatggtagaaggagagaaacagactttcttg
ggttgtcctctgaccttataaccttaggagtatttgcacatgtgggtgta
cacacacacacacacacatgcatactcacactcacattctctctctcaca
caaagaggtaggattataggtgttttcggagagagagattaaaattaatg
attgcttgggtcttgggaagaaatggagagaggaaaatgatattgcccag
gatgtcttttggggatgataaatgtggatcgcggtaatgggatggacagc
ttttttttttaagattattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_123127774_123127843
seq2: B6Ng01-207I09.b_217_286 (reverse)

seq1  TTGTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTT  50
      ||||| ||||||||||||||||| ||||||||||||||  ||||||||||
seq2  TTGTTCTTAATAGCTGAGTAGTATTCCATTGTGTAAATTAACCACATTTT  50

seq1  CTGTATCCATTCCTCTGTTG  70
      |||||||||||| |||||||
seq2  CTGTATCCATTCTTCTGTTG  70

seq1: chr11_101293031_101294001
seq2: B6Ng01-207I09.g_62_1031

seq1  GAATTCAGTTCTAGGTCAGCCTGTTATATAGTGTGAGTTCCAGGCTGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCTAGGTCAGCCTGTTATATAGTGTGAGTTCCAGGCTGGCC  50

seq1  TACCTAGTAAGACCTCTCAGGTATGCCACAGTAGGATGGAAAGAACATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGTAAGACCTCTCAGGTATGCCACAGTAGGATGGAAAGAACATGA  100

seq1  TCTGAAGGTGCTTCAGGACCACCGCTGGCCTCATGGCCTTGAGCAGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGGTGCTTCAGGACCACCGCTGGCCTCATGGCCTTGAGCAGATTT  150

seq1  CTCCCCGTTAGTCTTACTGGGGATGATCCACTCCTCGCCTACTTAGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCGTTAGTCTTACTGGGGATGATCCACTCCTCGCCTACTTAGCAAA  200

seq1  TATTATTGAGCCAGCTGTGCTGCACCAGGCACCTCTCACACAGGGAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTGAGCCAGCTGTGCTGCACCAGGCACCTCTCACACAGGGAAGCA  250

seq1  CAATAATTTATAGCATTCTGATCATGGAGTAGACACCATTAACTTTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATTTATAGCATTCTGATCATGGAGTAGACACCATTAACTTTATTT  300

seq1  TTCCTGTAAAAATCTACTGTGAGGGGGATAAATACATGTCTTGCTTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTAAAAATCTACTGTGAGGGGGATAAATACATGTCTTGCTTTTGT  350

seq1  AACTTCTGACGACAGATGAAGTGGGAAGCCCCCTGCAGACAGGTGGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGACGACAGATGAAGTGGGAAGCCCCCTGCAGACAGGTGGACAC  400

seq1  TGTGAGTGCCAAGCCAGCGGGAAGGTGGGAATCGGCTCCACCAGGGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTGCCAAGCCAGCGGGAAGGTGGGAATCGGCTCCACCAGGGTGGG  450

seq1  TGGCAGTACACTGCCCCCAGGACCCGGCAAAGGTAAGTATGGCTCCTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTACACTGCCCCCAGGACCCGGCAAAGGTAAGTATGGCTCCTGGA  500

seq1  ACGCACAGGCTACAAAAGCAGAAAGTGCAAGGTGAATCAAGAGTTCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCACAGGCTACAAAAGCAGAAAGTGCAAGGTGAATCAAGAGTTCAAGG  550

seq1  CCAATCTGAACTACATATTGAGAGCCTGTCTGGCAAAAGGAAGGGACAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTGAACTACATATTGAGAGCCTGTCTGGCAAAAGGAAGGGACAGT  600

seq1  GAGATTGTCTCAGCAGGTGTTGGCACTTGCTGCCAAGCCTGAGGACATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGTCTCAGCAGGTGTTGGCACTTGCTGCCAAGCCTGAGGACATGA  650

seq1  GTTGGTTCCCAGGGACTTACATGGTAGAAGGAGAG-AACAGACTTTCTTG  699
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTTGGTTCCCAGGGACTTACATGGTAGAAGGAGAGAAACAGACTTTCTTG  700

seq1  GGTTGTCCTCTGACCTTATAACCTTAGGAGTATTTGCACATGTGGGTGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCCTCTGACCTTATAACCTTAGGAGTATTTGCACATGTGGGTGTA  750

seq1  CACACACACACACACACATGCATACTCACACTCACATTCTCTCTCTCACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACATGCATACTCACACTCACATTCTCTCTCTCACA  800

seq1  CAAAGAGGTAGGATTATAGGTGTTTTCGGAGAGAGAGATTAAAATTAATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGGTAGGATTATAGGTGTTTTCGGAGAGAGAGATTAAAATTAATG  850

seq1  ATTGCTTGGGTCTTGGGAAGAAATGGGAGAGAGG-AAATGATATGGCCCA  898
      |||||||||||||||||||||||| ||||||||| ||||||||| |||||
seq2  ATTGCTTGGGTCTTGGGAAGAAAT-GGAGAGAGGAAAATGATATTGCCCA  899

seq1  GGATGTCTTTTGGGGATGATAAATGTGGATCGTGGTAAT-GGATGGACAG  947
      |||||||||||||||||||||||||||||||| |||||| ||||||||||
seq2  GGATGTCTTTTGGGGATGATAAATGTGGATCGCGGTAATGGGATGGACAG  949

seq1  CTTTTTTTTTTTTAAGATTTATTT  971
      |  |||||||||||||| ||||||
seq2  C--TTTTTTTTTTAAGA-TTATTT  970