This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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Search Parameter
BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
B6Ng01-207M03
Chromosome
11 (Build37)
Map Location
27,969,787 - 27,970,977
singlet/doublet
singlet
Overlap gene
none
Upstream gene
LOC100042377
Downstream gene
EG626571
,
Ccdc85a
,
Efemp1
,
LOC382504
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC100042377
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100042377
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
EG626571
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:626571
MGI:3704119
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 2 Proteins
name
Ccdc85a
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:216613
MGI:2445069
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Efemp1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:216616
MGI:1339998
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC382504
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:382504
definition
note
: laminin receptor 1 pseudogene
pseudo
: _no_value
name
EG626571
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:149261686
GeneID:626571
MGI:3704119
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 2 Proteins
product
: predicted gene, EG626571, transcript variant 1
transcript_id
: XM_484000.4
name
EG626571
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:94389922
GeneID:626571
MGI:3704119
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein
product
: predicted gene, EG626571, transcript variant 2
transcript_id
: XM_901734.2
name
Ccdc85a
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:141801107
GeneID:216613
MGI:2445069
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: coiled-coil domain containing 85A
transcript_id
: NM_181577.3
name
Efemp1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:22122482
GeneID:216616
MGI:1339998
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: epidermal growth factor-containing fibulin-like extracellular matrix protein 1
transcript_id
: NM_146015.1
name
EG626571
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:82933760
GeneID:626571
MGI:3704119
definition
codon_start
: 1
product
: hypothetical protein isoform 2
protein_id
: XP_906827.1
name
EG626571
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:51766327
GeneID:626571
MGI:3704119
definition
codon_start
: 1
product
: hypothetical protein isoform 1
protein_id
: XP_484000.1
name
Ccdc85a
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:31712026
CCDS:CCDS24489.1
GeneID:216613
MGI:2445069
definition
codon_start
: 1
exception
: mismatches in translation
product
: coiled-coil domain containing 85A
protein_id
: NP_853555.1
name
Efemp1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:22122483
GeneID:216616
MGI:1339998
definition
GO_function
: GO:0005509 - calcium ion binding [Evidence IEA]
codon_start
: 1
product
: epidermal growth factor-containing fibulin-like extracellular matrix protein 1
protein_id
: NP_666127.1
name
LOC100042377
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042377
definition
number
: 2
pseudo
: _no_value
name
LOC100042377
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042377
definition
number
: 1
pseudo
: _no_value
clone name
MSMg01-328A02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-461F23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-358H20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-046D08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-278O16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-483O21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-103N08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-423P19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-452N17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-198N04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-135L22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-187J15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-267K03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-061F19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-058H18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-502G12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-457B16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-190K02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-521E23
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-425L11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-330D07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-374I21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-203H18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-387C08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-053F18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-344G01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-493H02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-476F06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-537C03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-122B09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-376M01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-119K15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-503A24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-423O04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-072P19
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-528I12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-508N13
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-407A23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-213L14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-336A17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181H23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-276K23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-237M06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-079A21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-076L01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-270D18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-301P04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-321O13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-297I02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-425B17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-483B14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-346E11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-365N14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-288B16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-523E24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-191E16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-518O17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-102F12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-489M03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-199O23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-535I02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-345C02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-087G07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-294N03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-207B18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-400F09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-468K06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-291L12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-508L07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-462C06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-398M07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-531L19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-141I13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-485P05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-391I24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-536E08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-146I06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-088M16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-363P22
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-158K08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-397B08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-320C11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-393O18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-396F02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-146F03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-236M10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-193N14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-417K15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-276G10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-342D16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-454P08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-495B02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-507L20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-422F16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-277N05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-528D19
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-091H15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-094N24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-185F13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-013P18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-173A20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-347P08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-294O22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-011P24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-241O09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-014L14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-161J11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-097D02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-233D16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-128A08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-024F21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-189J23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-170F19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-281E19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-245O04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-015K22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-134G07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-289F10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-217K02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-321M06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-150P07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-006H05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-279F07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-337N06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-072M24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-258A04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-010H01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-184O08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-166A22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-082H01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-347H08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-079H12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-270D07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-170K22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-217C20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-030O17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-148C23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-194I08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-159B07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-210F16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-293L16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-117K24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-102G17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-207M03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-336I20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-143E11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-086B03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-280C08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-115H14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-295A08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-020B16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-317D24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-113P15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-271N03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-140J18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-257J14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-342C24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-012L22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-194A03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-034F10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-119N02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-022F11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-264A22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-248D19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-065N14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-011B08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-050M07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-238H08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-022I08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-228C22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-051J09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-192F01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-077J14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-191L15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-160N04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-179O21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-043I20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-269E07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-158I22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-012F04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-119C16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-001P04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-036O23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-251I03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-048J14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-015N09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-288D20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-324C15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-097P23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-189F11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-045M05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-176F02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-010E18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-013F05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-221K22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-090P13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-180P15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-237C02
singlet/doublet
singlet
plural/unique
unique