BAC Information

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BAC

Clone NameB6Ng01-210M07
Chromosome11 (Build37)
Map Location 103,285,695 - 103,286,613
singlet/doubletsinglet
Overlap genenone
Upstream geneGrn, BC025575, Itga2b, Mdk-ps1, LOC100040792, Fzd2, 2810433D01Rik, Psmb5-ps, Gm1564, LOC100042456, Ccdc43, Adam11, Gja7, Higd1b, Eftud2, Ccdc103, LOC100042500, Gfap, 3000004C01Rik, C1ql1, Dcakd, Nmt1, Plcd3, Acbd4, Hexim1, Hexim2, Fmnl1, 4933400C05Rik, Map3k14, Arhgap27, 5730442P18Rik, Plekhm1
Downstream geneLrrc37a, Gm884, Lyzl6, Rprml, Gosr2, Wnt9b, Wnt3, Nsf, EG667631, Arf2, LOC100042645, Crhr1, 4933407P14Rik, Mapt, 1700081L11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210M07.bB6Ng01-210M07.g
ACCGA029022GA029023
length1,134924
definitionB6Ng01-210M07.b B6Ng01-210M07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatccctggtgatgtcaaagatgcagagtcaaagcagcacagtta
acactaagaggagcacacactacaggcaggaaaagaaagtagtaagagca
gaaaaaggatcagccaaggtagaatacgagtgtattccaaaggactcgga
gttcttaccatctccagagatccggacatgctcagtgagttaggggattg
aaagggtgaaaaaatgatagagaagaaaaaagaacccacaaagcagcaaa
agccagttctaagtagtacccagtcatggggctaggcagaatgggaaatt
tggtttcaagtgctattttttttttcaagacaccagcaaaatttactgtg
gctgcttctgctgggatatcccaactctgcttccagaggcaactttctcc
tttctttctttctttctttctttctttctttctttctttctttctttctt
tcttttcttcctataattttgtttttgtttttttttttttaaagattgga
aggacaatttaaaaagatttgaagaatggctgagcaactggaaaaattgt
gggtggaaatggaagcgcttgggaagcaaggagtgccagaaaagggagaa
caaagggcccagttctggtgcctgagccagacagcaggagcttcctgaag
gaggaaagagggaaagacattgtgccagagggcagagaaaagttgaaaag
gctgaggacaatctgatccaatagcctatttcaggagaaagggttactct
caaaccactgtgctgccagaatgtgactagtggacccagggttacaagct
tatccccaatagttttcccgatagtcagagagcatatgcctgctatgagt
ggggacaaagttatggtgagtaagataatatcctatggaaatgatagatc
taaagcattttaagatgctatgctttcatatgaaatgcacttgccatatc
tcaaacaaattctaactgaattactcaaaatagaattattccccaagact
ggaagggatgtgacgtgtactagagacccatccacatggtggatctctag
tacactagtggtgaggagaagtcacactattgaacagtgcagaagttagg
ataattagtcaaatatcgttgctgatgcagagtg
gaattctttgggtaatgcagtagtgaccatttttctggccctcatgattc
atcctagcaagtgaccaaccctgaggtggccgtctagctggtaggataca
caagtcacaacctggactgttactgccacctcaacagggccatctagtag
agctgagcccttatctgagcagtctgaccctgactctaccctgactccag
ttacagcaaagtccagcagattctgggaccccctgctggtatatgcccag
agaactcaaaagttgcttggtgtgggtacactccccccccaagttggtgt
cagaaggactgagaatgagtgaagtagcagaaaaaagggggtgcttaact
ctgcgttcaagtagtttaaaaatgagcccacaaattctagaacccccttt
tcaaaagatggtgcctagcatccccttcctcacaactgaggatggctaac
acaagcatgtgcctgcaagggtgctctgatctcatgtgcaaaggagggga
ggtgattgctctgccatttctggggctagaagattataacaaggactgaa
aacttgttttggggaaaatgagtaacgaaactctaagtggctttgtgcaa
agctatccccctggatatgatctatcagttgtatcttgaactcttgagca
gctctgaggagaccctcatcaagattagcttgtgagactttctatcatgg
agctggggagaatcccacaaggctgcccctccctgagaattcatgggcag
ttaacagttactagggagagggatgcttgagtcctggccctttagcagtg
cctttagaggcagttaacagttcctcggggggtggggcttatgaggcccc
gcccacccccgcggctagcttctgagcagttagcagaatgctggtgtggc
cgggcttgaaaataggtgtagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_103285695_103286613
seq2: B6Ng01-210M07.g_67_990

seq1  GAATTCTTTGGGTAATGCAGTAGTGACCATTTTTCTGGCCCTCATGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGGTAATGCAGTAGTGACCATTTTTCTGGCCCTCATGATTC  50

seq1  ATCCTAGCAAGTGACCAACCCTGAGGTGGCCGTCTAGCTGGTAGGATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGCAAGTGACCAACCCTGAGGTGGCCGTCTAGCTGGTAGGATACA  100

seq1  CAAGTCACAACCTGGACTGTTACTGCCACCTCAACAGGGCCATCTAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCACAACCTGGACTGTTACTGCCACCTCAACAGGGCCATCTAGTAG  150

seq1  AGCTGAGCCCTTATCTGAGCAGTCTGACCCTGACTCTACCCTGACTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGCCCTTATCTGAGCAGTCTGACCCTGACTCTACCCTGACTCCAG  200

seq1  TTACAGCAAAGTCCAGCAGATTCTGGGACCCCCTGCTGGTATATGCCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCAAAGTCCAGCAGATTCTGGGACCCCCTGCTGGTATATGCCCAG  250

seq1  AGAACTCAAAAGTTGCTTGGTGTGGGTACACTCCCCCCCCAAGTTGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAAAAGTTGCTTGGTGTGGGTACACTCCCCCCCCAAGTTGGTGT  300

seq1  CAGAAGGACTGAGAATGAGTGAAGTAGCAGAAAAAAGGGGGTGCTTAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGACTGAGAATGAGTGAAGTAGCAGAAAAAAGGGGGTGCTTAACT  350

seq1  CTGCGTTCAAGTAGTTTAAAAATGAGCCCACAAATTCTAGAACCCCCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGTTCAAGTAGTTTAAAAATGAGCCCACAAATTCTAGAACCCCCTTT  400

seq1  TCAAAAGATGGTGCCTAGCATCCCCTTCCTCACAACTGAGGATGGCTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGATGGTGCCTAGCATCCCCTTCCTCACAACTGAGGATGGCTAAC  450

seq1  ACAAGCATGTGCCTGCAAGGGTGCTCTGATCTCATGTGCAAAGGAGGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCATGTGCCTGCAAGGGTGCTCTGATCTCATGTGCAAAGGAGGGGA  500

seq1  GGTGATTGCTCTGCCATTTCTGGGGCTAGAAGATTATAACAAGGACTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTGCTCTGCCATTTCTGGGGCTAGAAGATTATAACAAGGACTGAA  550

seq1  AACTTGTTTTGGGGAAAATGAGTAACGAAACTCTAAGTGGCTTTGTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTTTTGGGGAAAATGAGTAACGAAACTCTAAGTGGCTTTGTGCAA  600

seq1  AGCTATCCCCCTGGATATGATCTATCAGTTGTATCTTGAACTCTTGAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCCCCCTGGATATGATCTATCAGTTGTATCTTGAACTCTTGAGCA  650

seq1  GCTCTGAGGAGACCCTCATCAAGATTAGCTTGTGAGACTTTCTATCATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAGGAGACCCTCATCAAGATTAGCTTGTGAGACTTTCTATCATGG  700

seq1  AGCTGGGGAGAATCCCACAAGGCTGCCCCTCCCTGAGAATTCATGGGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGGAGAATCCCACAAGGCTGCCCCTCCCTGAGAATTCATGGGCAG  750

seq1  TTAACAGTTACTAGGGAGAGGGATGCTTGAGTCCTGGCCCTTTAGCAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGTTACTAGGGAGAGGGATGCTTGAGTCCTGGCCCTTTAGCAGTG  800

seq1  CCTTTAGAGGCAGTTAACAGTTCCTC-GGGGGTGGGGCTTATGAGGCCCC  849
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTTTAGAGGCAGTTAACAGTTCCTCGGGGGGTGGGGCTTATGAGGCCCC  850

seq1  GCCCACCCCCGCGGCTAGC-TCTGAGCAGTTAGCAG-ATGCTGGTGTGGC  897
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  GCCCACCCCCGCGGCTAGCTTCTGAGCAGTTAGCAGAATGCTGGTGTGGC  900

seq1  CGGGCT--GAAATAGGTGTAGTGG  919
      ||||||   |||||||||||||||
seq2  CGGGCTTGAAAATAGGTGTAGTGG  924