BAC Information

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BAC

Clone NameB6Ng01-210P08
Chromosome11 (Build37)
Map Location 42,811,420 - 42,812,461
singlet/doubletsinglet
Overlap genenone
Upstream geneGabrg2, Gabra1, Gabra6, Gabrb2
Downstream geneAtp10b, EG544767, Pttg1, Slu7, LOC100039392, C1qtnf2, Ccnjl, Fabp6, LOC620562, 4631424J17Rik, Ttc1, Adra1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210P08.bB6Ng01-210P08.g
ACCGA029159GA029160
length9911,032
definitionB6Ng01-210P08.b B6Ng01-210P08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaactgaggaatattaaatggctgagaagcacctgaaaaaatg
ttcaacatgcttaatcaccagggaaatgcaaatcaaaacaaccctgagat
tcctcctcacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatggtggtgaggatgtggagaaagaataacactcctccattgttggtg
ggattgcaagctggtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatacccggaagatccagcaatacctctcctgggcatact
agatgttccaacttgtcataaggacacatgctccactatgttcatagcag
ccttatttataatagccagaagctggaaagaacccagatgtccctcaaca
gaggaatgaatacagaaaatgtggttcatttatacaatggagtactactc
agcaattaaaaacaataaatgtatgaaattcttgggcaaatggatgtatc
tggaggatatcatcctgagtgaggtatcccaatcacaaaagaacacacat
gatatgcacacactgataaatggatattagcccataaacttagaatatcc
aagatacaatttgcaaaacatatgaaactcaagaagaaggaacaccaaag
tgtggatacttcattccttcttagaatgggctataaaatatcgatggaag
gagttacagagacaaaatttggagctgagacagaaggaaggaccatccag
agtctgccccacccaaggatccatcccatatacagccaccaaacccagac
actattgcatatgccagaaagattttgctgataggacccatgatatagct
atctcttgtgaggctatgccagtttcctggcaaatacaggaagttggatg
cttactgttatctattggaatggaatacagggcccctagtgaaggagcta
gagaaaggtaccctagggaagctattgggtctgcaaccctt
gaattccagtgagaaatagtgaggcttgggtctcacaccacttagctgct
ggccatctgaactcgggtcctcatgtttgtgtggcaagcactttactttc
ttcagcctctgtatccttcttctctatactgtatatggcttttcttatgt
caggctggcatttatttttattccctttggatacatttaagagttggttt
atatcctacttgattttgctaaagctcaaggcaagtattttttttaattc
tccatctacaattctatctatttcgcttcactggaatctgctactttcta
agggatcatgctgcttctgttgctcatgtttcttgagttcctgctttgtc
atttgtatttcaggattatttcagtggttgtgagatatatatatatcagc
tacatccttcagttgaagtatttgcagtgttcacatgaaactagactgta
gtatatcaaatgaataattcctctagtgtggactggtaatataattcatt
ggctaaccctcatgtgcatggccctagaatgattccccaatgacattcca
agaattgaatattaactgctttctaagaccactatgcaaatatcataata
gttcccttaaacttcaattactagcaagggataaagaatcagaagggtat
tgtgggatctaacagattgtgttctaaggctaagattagaaataaaattg
tcttagtagagaaagattagatagagcaggaaagtagagatgttgtgaaa
aatcctcagaatttaaagactattaaaactatgacacatgttaattaaga
agttaaaatgaatgggagggttaaaaaaaaaaaagaagaggtaagcatag
tggaggtgagatgggaagtatatgggctctaataagaatagtatgacata
ctcaatggaatggggtgtggcacatgtaaaatcattaccaatcatttagt
gatataaaaccaaatcttgacattgatgaaatattttcgcagagtaagtt
tggggcttttcgctttttcttgttattttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_42811420_42812461
seq2: B6Ng01-210P08.g_65_1096

seq1  GAATTCCAGTGAGAAATAGTGAGGCTTGGGTCTCACACCACTTAGCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGAGAAATAGTGAGGCTTGGGTCTCACACCACTTAGCTGCT  50

seq1  GGCCATCTGAACTCGGGTCCTCATGTTTGTGTGGCAAGCACTTTACTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCTGAACTCGGGTCCTCATGTTTGTGTGGCAAGCACTTTACTTTC  100

seq1  TTCAGCCTCTGTATCCTTCTTCTCTATACTGTATATGGCTTTTCTTATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCTCTGTATCCTTCTTCTCTATACTGTATATGGCTTTTCTTATGT  150

seq1  CAGGCTGGCATTTATTTTTATTCCCTTTGGATACATTTAAGAGTTGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGCATTTATTTTTATTCCCTTTGGATACATTTAAGAGTTGGTTT  200

seq1  ATATCCTACTTGATTTTGCTAAAGCTCAAGGCAAGTATTTTTTTTAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTACTTGATTTTGCTAAAGCTCAAGGCAAGTATTTTTTTTAATTC  250

seq1  TCCATCTACAATTCTATCTATTTCGCTTCACTGGAATCTGCTACTTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTACAATTCTATCTATTTCGCTTCACTGGAATCTGCTACTTTCTA  300

seq1  AGGGATCATGCTGCTTCTGTTGCTCATGTTTCTTGAGTTCCTGCTTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCATGCTGCTTCTGTTGCTCATGTTTCTTGAGTTCCTGCTTTGTC  350

seq1  ATTTGTATTTCAGGATTATTTCAGTGGTTGTGAGATATATATATATCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATTTCAGGATTATTTCAGTGGTTGTGAGATATATATATATCAGC  400

seq1  TACATCCTTCAGTTGAAGTATTTGCAGTGTTCACATGAAACTAGACTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCCTTCAGTTGAAGTATTTGCAGTGTTCACATGAAACTAGACTGTA  450

seq1  GTATATCAAATGAATAATTCCTCTAGTGTGGACTGGTAATATAATTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATCAAATGAATAATTCCTCTAGTGTGGACTGGTAATATAATTCATT  500

seq1  GGCTAACCCTCATGTGCATGGCCCTAGAATGATTCCCCAATGACATTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAACCCTCATGTGCATGGCCCTAGAATGATTCCCCAATGACATTCCA  550

seq1  AGAATTGAATATTAACTGCTTTCTAAGACCACTATGCAAATATCATAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGAATATTAACTGCTTTCTAAGACCACTATGCAAATATCATAATA  600

seq1  GTTCCCTTAAACTTCAATTACTAGCAAGGGATAAAGAATCAGAAGGGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCTTAAACTTCAATTACTAGCAAGGGATAAAGAATCAGAAGGGTAT  650

seq1  TGTGGGATCTAACAGATTGTGTTCTAAGGCTAAGATTAGAAATAAAATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGATCTAACAGATTGTGTTCTAAGGCTAAGATTAGAAATAAAATTG  700

seq1  TCTTAGTAGAGAAAGATTAGATAGAGCAGGAAAGTAGAGATGTTGTGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTAGAGAAAGATTAGATAGAGCAGGAAAGTAGAGATGTTGTGAAA  750

seq1  AATCCTCAGAATTTAAAGACTATTAAAACTATGACACATGTTAATTAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCAGAATTTAAAGACTATTAAAACTATGACACATGTTAATTAAGA  800

seq1  AGTTAAAATGAAATGGGAGGGTT-AAAAAAAAAAAGAAGAGGTAAGCATA  849
      |||||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  AGTTAAAATG-AATGGGAGGGTTAAAAAAAAAAAAGAAGAGGTAAGCATA  849

seq1  GTGGAGGTGAGATGGAAAGTATATGGGCTCTAATAAGAATAGTATGACAT  899
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTGGAGGTGAGATGGGAAGTATATGGGCTCTAATAAGAATAGTATGACAT  899

seq1  ACTCAATGGAAT-GGGTGTGGCAACATTGTAAAAATCA-TAACAATCATT  947
      |||||||||||| ||||||||| ||| ||| ||||||| || ||||||||
seq2  ACTCAATGGAATGGGGTGTGGC-ACA-TGT-AAAATCATTACCAATCATT  946

seq1  TAGTGATATAAAACCAAAATCTTGACATTGATGAGATATTTTTTGCAAGA  997
      ||||||||||||||| |||||||||||||||||| ||| |||| || |||
seq2  TAGTGATATAAAACC-AAATCTTGACATTGATGAAATA-TTTTCGC-AGA  993

seq1  GTAAAGTTTTGGGGCTTTTTCGCTTTTTTCTTTGTTTATTTTTTT  1042
      ||||   |||||||| ||||||| ||||||||   ||||||||||
seq2  GTAA--GTTTGGGGC-TTTTCGC-TTTTTCTT--GTTATTTTTTT  1032