BAC Information

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BAC

Clone NameB6Ng01-211D22
Chromosome11 (Build37)
Map Location 88,522,292 - 88,523,370
singlet/doubletsinglet
Overlap genenone
Upstream geneRnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464, Dynll2, Sfrs1, Vezf1, Cuedc1, Mrps23, 1700106J16Rik, LOC668793, Msi2
Downstream geneLOC100038945, Akap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525, LOC100039114, Nog, LOC100039047, 4932411E22Rik, Ankfn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211D22.bB6Ng01-211D22.g
ACCGA029367GA029368
length1,0041,069
definitionB6Ng01-211D22.b B6Ng01-211D22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagtactgtgactgctggccaagtgttctgccactgatctata
tccacagcccttctctagggttttatctatgtaagaccacctcgtctgta
aaggcagagtcttgctttgccctcttcccttccactttgccctgatcaga
atgtctagttcagcagaaatggtgtattagttttctactaactatggtga
caagcaaggtaccatgaccgaggtgacttataaaagaaagcgttgagtta
ggcttatgatttcagaagattagagtctatgatggcaggatggagtcaaa
gcagcaggaacagctgagagctcccatcttgatctgcaaagcagtaggca
gagagcaagagcatctagaccgtcttttgaaacctcaaaagcaaccccag
cttctttgacacccctcctctgaggccacgcctcctcattcttcccatac
agttccactaactggggaccaagtattcaaatatgggggttaggactctc
attcaaaccaacacaggtggacttccttgtctgagtccccatctcagcaa
gatgctttcagtattttgccagcaagttttaggtaacaaactggttttct
tttaaaattacctttattaatgtattgtgtgtggtgtatgcctgtgggca
catgggtcatagcacgtacatcttgaggtcagaggacaacgttgtggagt
tggtcctctacaggtttgtgtggtaagttcctttacacacttcaccatct
caccagtacagagaacttccttccttccttccttccttccttacattcca
tacttccttccttcctcccttccttccttccttccctttcttccttccct
cccgttcgctctctttctttcgttctttccttctttcttcttcttcttcc
ttactttctatctttctatcttcctttctttcccttcttcttcttctcct
aatcttctcttcttcttcttcatcttctcgtcattctcttcatcatctcg
ttgt
gaattcttccgccctgcttgaaccaacccagcccctcctcttgctctggt
ctgagaatggccagaaatagtttccattgtcattgactgaaatttccact
ttgatgatgggaacaaatatttttcttaccctttcctgaaacaggaataa
atttttccatacaggttcttctaattggggcctgaggttcaaatcttaag
aaaaaaaaaaaaaaaaggcagccaacattcaaaaaggcaagaaaagggca
tttgcctcttttctaaagaggctgaccctgaacctccgcttcacagccac
caagggaggacccatccccttggagcatccatagctcttcctctatactc
ttgggagtttagagaagcccctgcagggcccccaggagcttacatttcaa
acatggtgcaaaggtatcctgcccaacacaggatctccctggaggcaccc
actaacacaactcttctcatacctgtgtttgctttcccacctctctctcc
tgcagcctccccttagcacgatgggagggctcctcaggtgagcaagctac
tgcagggagcagatacagaagaggagacagcctgactccttcctctgcag
ggaactctgagggctcatccaggggaaaggtcagcatgagttttggtgtt
acagagttctctagagagcctcgggtgtttccagagttaatatttacaag
gccacactgggattcccagctggaatcgggtggagaagaagcaaagcaca
cagagggatagccgaaggctccaaaaattgtctgcggccaacaaggacct
ttgaggccagggcggggggcttcttgtcatcccttctctaatccagacct
cattatgctgagcttgccaatcaaagctcaagaaaagttcttaaactggg
atctagtcacgatccctatctgttgtagcagtgactagaagcctgggaga
gaggacaacacccgcccagtgtccttgaaagctgtaaggggagaactctg
atgctttctgcttgacaggtcacattgcagagggggccaagcattggagt
gtccatggaactgacctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_88522292_88523370
seq2: B6Ng01-211D22.g_63_1131

seq1  GAATTCTTCCGCCCTGCTTGAACCAACCCAGCCCCTCCTCTTGCTCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCGCCCTGCTTGAACCAACCCAGCCCCTCCTCTTGCTCTGGT  50

seq1  CTGAGAATGGCCAGAAATAGTTTCCATTGTCATTGACTGAAATTTCCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAATGGCCAGAAATAGTTTCCATTGTCATTGACTGAAATTTCCACT  100

seq1  TTGATGATGGGAACAAATATTTTTCTTACCCTTTCCTGAAACAGGAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGATGGGAACAAATATTTTTCTTACCCTTTCCTGAAACAGGAATAA  150

seq1  ATTTTTCCATACAGGTTCTTCTAATTGGGGCCTGAGGTTCAAATCTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCCATACAGGTTCTTCTAATTGGGGCCTGAGGTTCAAATCTTAAG  200

seq1  AAAAAAAAAAAAAAAAGGCAGCCAACATTCAAAAAGGCAAGAAAAGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAGGCAGCCAACATTCAAAAAGGCAAGAAAAGGGCA  250

seq1  TTTGCCTCTTTTCTAAAGAGGCTGACCCTGAACCTCCGCTTCACAGCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCTTTTCTAAAGAGGCTGACCCTGAACCTCCGCTTCACAGCCAC  300

seq1  CAAGGGAGGACCCATCCCCTTGGAGCATCCATAGCTCTTCCTCTATACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAGGACCCATCCCCTTGGAGCATCCATAGCTCTTCCTCTATACTC  350

seq1  TTGGGAGTTTAGAGAAGCCCCTGCAGGGCCCCCAGGAGCTTACATTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGTTTAGAGAAGCCCCTGCAGGGCCCCCAGGAGCTTACATTTCAA  400

seq1  ACATGGTGCAAAGGTATCCTGCCCAACACAGGATCTCCCTGGAGGCACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGCAAAGGTATCCTGCCCAACACAGGATCTCCCTGGAGGCACCC  450

seq1  ACTAACACAACTCTTCTCATACCTGTGTTTGCTTTCCCACCTCTCTCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACACAACTCTTCTCATACCTGTGTTTGCTTTCCCACCTCTCTCTCC  500

seq1  TGCAGCCTCCCCTTAGCACGATGGGAGGGCTCCTCAGGTGAGCAAGCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCTCCCCTTAGCACGATGGGAGGGCTCCTCAGGTGAGCAAGCTAC  550

seq1  TGCAGGGAGCAGATACAGAAGAGGAGACAGCCTGACTCCTTCCTCTGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGAGCAGATACAGAAGAGGAGACAGCCTGACTCCTTCCTCTGCAG  600

seq1  GGAACTCTGAGGGCTCATCCAGGGGAAAGGTCAGCATGAGTTTTGGTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCTGAGGGCTCATCCAGGGGAAAGGTCAGCATGAGTTTTGGTGTT  650

seq1  ACAGAGTTCTCTAGAGAGCCTCGGGTGTTTCCAGAGTTAATATTTACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTTCTCTAGAGAGCCTCGGGTGTTTCCAGAGTTAATATTTACAAG  700

seq1  GCCACACTGGGATTCCCAGCTGGAATCGGGTGGAGAAGAAGCAAAGCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACTGGGATTCCCAGCTGGAATCGGGTGGAGAAGAAGCAAAGCACA  750

seq1  CAGAGGGATAGCCGAAGGCTCCAAAAATTGTCTGCGGCCAACAAGGACC-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAGAGGGATAGCCGAAGGCTCCAAAAATTGTCTGCGGCCAACAAGGACCT  800

seq1  TTGAGGCCAGGGCGGGGGGCTTCTTGTCAT-CCTTCTCTAATCCAGACCT  848
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTGAGGCCAGGGCGGGGGGCTTCTTGTCATCCCTTCTCTAATCCAGACCT  850

seq1  CATTATGCTGAGCTTGCCAATCAAAGCTCAAGAAAAGTTCTTAAACT-GG  897
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CATTATGCTGAGCTTGCCAATCAAAGCTCAAGAAAAGTTCTTAAACTGGG  900

seq1  ATCTAGTCACGATCCCTATCTGTTTGTAGCAGTGACTAGAAGCCTGGGAG  947
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATCTAGTCACGATCCCTATCTG-TTGTAGCAGTGACTAGAAGCCTGGGAG  949

seq1  AGAGGGACAACACCCGCCCAGTGTCCTTGAAAGCTGTAAGGGGAGAACTC  997
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGA-GGACAACACCCGCCCAGTGTCCTTGAAAGCTGTAAGGGGAGAACTC  998

seq1  TGATTGCCTTTCCTGGCCTTGGACCAGGCCACA-TGCAGAGGGGGCAAAA  1046
      ||| |||  || |||  ||||   |||| |||| ||||||||||||  ||
seq2  TGA-TGC--TTTCTG--CTTG--ACAGGTCACATTGCAGAGGGGGC-CAA  1040

seq1  GCATTTGGAGTGTCCATGGGAAACTGACACTAC  1079
      ||| |||||||||||||||  ||||||| ||||
seq2  GCA-TTGGAGTGTCCATGG--AACTGAC-CTAC  1069