BAC Information

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BAC

Clone NameB6Ng01-211K20
Chromosome11 (Build37)
Map Location 25,055,542 - 25,056,456
singlet/doubletsinglet
Overlap genenone
Upstream geneBcl11a, LOC100042282
Downstream gene5730522E02Rik, LOC100042328
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211K20.g
ACCGA029677
length921
definitionB6Ng01-211K20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattacaatttctaagtgtgaaagcatttacatgtaaaggacaa
ccaaatgctttctccctgaaacaacaggggatgcttttacatcgcaggca
gattgtgcccagtctaagaaaaggcttcaatgttcatctgggcctaggct
gacttgaggacacttaacatagtgtatttgaaaaattactgttagttaaa
ggcaagacagatgttgcactgagtggcccagcccagactctaaacccagg
agttttgtggcatgtatggaaaggcagacagcacatcagtgtgagaaaat
ggaactgccattgtgtcttactaacccagatggtctacctcctcctgcca
ttctccaagaagcaaccctcagccaacaaaggatgcttcagttctagtcc
ttcaactgcaaaattcttaacaatagtgccgtatctgaacacagcagaat
aactcaatctacccagttctcatcaaagcaaagccatctgtctcaacgtt
tgtcatcatttcaagtcagtatcccatcagaataaataaattaggcttag
gaggctgagtaatcagtgtgttgtaaacactgatagaaataagttttaag
tgaatggtgagaattcttccttgttaggagtgtacccagtccattgggaa
tggtggacacaccaaacaagattcttgtggatacaaagagagagagagag
agagagagagagagagagagagagagagagagagagtggtgagaactctg
agaatagctaatgagggaggaacttcctgatgctgttcactttcgccaga
aattgaccatactagcaggaaagcttatgaagacctcaccatctttccag
ctggttctctatccgctaccatgtcctctctgagagctgcccaatcgagt
ggctgaatagtgctaagaaca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_25055542_25056456
seq2: B6Ng01-211K20.g_71_991

seq1  GAATTCAATTACAATTTCTAAGTGTGAAAGCATTTACATGTAAAGGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTACAATTTCTAAGTGTGAAAGCATTTACATGTAAAGGACAA  50

seq1  CCAAATGCTTTCTCCCTGAAACAACAGGGGATGCTTTTACATCGCAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGCTTTCTCCCTGAAACAACAGGGGATGCTTTTACATCGCAGGCA  100

seq1  GATTGTGCCCAGTCTAAGAAAAGGCTTCAATGTTCATCTGGGCCTAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGCCCAGTCTAAGAAAAGGCTTCAATGTTCATCTGGGCCTAGGCT  150

seq1  GACTTGAGGACACTTAACATAGTGTATTTGAAAAATTACTGTTAGTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAGGACACTTAACATAGTGTATTTGAAAAATTACTGTTAGTTAAA  200

seq1  GGCAAGACAGATGTTGCACTGAGTGGCCCAGCCCAGACTCTAAACCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGACAGATGTTGCACTGAGTGGCCCAGCCCAGACTCTAAACCCAGG  250

seq1  AGTTTTGTGGCATGTATGGAAAGGCAGACAGCACATCAGTGTGAGAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGTGGCATGTATGGAAAGGCAGACAGCACATCAGTGTGAGAAAAT  300

seq1  GGAACTGCCATTGTGTCTTACTAACCCAGATGGTCTACCTCCTCCTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGCCATTGTGTCTTACTAACCCAGATGGTCTACCTCCTCCTGCCA  350

seq1  TTCTCCAAGAAGCAACCCTCAGCCAACAAAGGATGCTTCAGTTCTAGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAAGAAGCAACCCTCAGCCAACAAAGGATGCTTCAGTTCTAGTCC  400

seq1  TTCAACTGCAAAATTCTTAACAATAGTGCCGTATCTGAACACAGCAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTGCAAAATTCTTAACAATAGTGCCGTATCTGAACACAGCAGAAT  450

seq1  AACTCAATCTACCCAGTTCTCATCAAAGCAAAGCCATCTGTCTCAACGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAATCTACCCAGTTCTCATCAAAGCAAAGCCATCTGTCTCAACGTT  500

seq1  TGTCATCATTTCAAGTCAGTATCCCATCAGAATAAATAAATTAGGCTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCATTTCAAGTCAGTATCCCATCAGAATAAATAAATTAGGCTTAG  550

seq1  GAGGCTGAGTAATCAGTGTGTTGTAAACACTGATAGAAATAAGTTTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGAGTAATCAGTGTGTTGTAAACACTGATAGAAATAAGTTTTAAG  600

seq1  TGAATGGTGAGAATTCTTCCTTGTTAGGAGTGTACCCAGTCCATTGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGTGAGAATTCTTCCTTGTTAGGAGTGTACCCAGTCCATTGGGAA  650

seq1  TGGTGGACACACCAAACAAGATTCTTGTGGATACAAAGAGAGAGAGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGACACACCAAACAAGATTCTTGTGGATACAAAGAGAGAGAGAGAG  700

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGGTGAGAACTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGGTGAGAACTCTG  750

seq1  AGAATAGCTAATGAGGGAGGAACTTCCTGATGCTGTTCACTTTCGCCAG-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAATAGCTAATGAGGGAGGAACTTCCTGATGCTGTTCACTTTCGCCAGA  800

seq1  AATTGACCATACTAGCAGGAAAGC-TATGAAGACCTCAGCATCTTT-CAG  847
      |||||||||||||||||||||||| ||||||||||||| ||||||| |||
seq2  AATTGACCATACTAGCAGGAAAGCTTATGAAGACCTCACCATCTTTCCAG  850

seq1  CTGGTTCTCTATCCGCTACCATGTCCTCTCTGAGAGCTGCCC-ATCGAG-  895
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  CTGGTTCTCTATCCGCTACCATGTCCTCTCTGAGAGCTGCCCAATCGAGT  900

seq1  GGCTG-AGAGTGCTAAGAACA  915
      ||||| | |||||||||||||
seq2  GGCTGAATAGTGCTAAGAACA  921


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