BAC Information

Click to search

BAC

Clone NameB6Ng01-212F05
Chromosome11 (Build37)
Map Location 61,469,330 - 61,470,468
singlet/doubletsinglet
Overlap geneGrap
Upstream geneLOC624424, OTTMUSG00000007757, LOC668206, Llgl1, Flii, Smcr7, Top3a, LOC100042517, Smcr8, Shmt1, LOC625958, LOC637900, Dhrs7b, Tmem11, Gtlf3b, Map2k3, Kcnj12, LOC668228, Tnfrsf13b, Usp22, LOC668239, Aldh3a1, Aldh3a2, 4933429E10Rik, 1300013J15Rik, LOC100042602, LOC626150, Zfp179, Mfap4, Mapk7, 3110043A19Rik, Eppb9, Epn2
Downstream geneSlc5a10, 2310040C09Rik, Prpsap2, Ulk2, Akap10, D630015H07, LOC626325, LOC100041558, Specc1, Adora2b, 2410012H22Rik, Ttc19, Ncor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212F05.bB6Ng01-212F05.g
ACCGA030151GA030152
length3661,136
definitionB6Ng01-212F05.b B6Ng01-212F05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagtgtgtgtgtatgtgtgtctgtgtgtgtgtttctgtgtgtgtagcgtg
ctttcatgatccatcagccgatagacatccagactgattccatttcctgg
ctattgtgagcatggacgtccaagtgtctgctagtaggatatggagccat
gagagtgtgttggttccttttctgttgctgtaataaagcaccgtgaccaa
ggcaatttattgaaggagtttatccaggcttaccattcattccagaggga
taagggtctaccatgatgtgaaagtgaggccgcaagtggcagacctagca
gctggagcaggaagctgagggctcacttcctgaaccacgaggaggaagta
gagagaggggggattg
gaattcaaggccagcctggacttcacaaggagaccttgtctcaaaaacaa
gaaagagggccagggagatggctcagtagataaaagcacttgatggcctg
ggtttgatccctgggacacacacacacactaataagtctaattttacaca
cacacacacacacacacacacacacacacacacacacacacaaagaacat
gcaaataaacaaagagaatgtgattttgcacttggacagccttagcaagt
cctcatgggcttcggccccacctccacccagccctccctcggaggggtag
ggctacagcctctccagtgctcagatcgtggctgttccaccacgcccatt
caggttcacttctgtatctaattcatactctgtgcaccccccagaaggac
agctgcctggaggagcccatcctgtctgcctggctgtttgctttctcatg
attagctggagtctagacctagacctaggacctgctgctagatgcttcag
agccctatctggctataaagggagtttctgggccatgcaacagattattt
ttcatttattcattttgagataggatttccaattctgtccaggcaatcgc
ttcaacaacatcaagagtgccatctggactaccgcaaaaaaaaaaaaaaa
aaaaattgttttttagatcaggctgacctcaaactcacagagatctgcct
gcccctgcctcccaagtgctgggattaaaggcatgcaccactaccacctg
actcctagtgcaaaaattttaagctttttaaattcatctagatcagtggg
ttctcaacttgtaggctacagcccatttatgagtcaaacaacccttttac
agggtccactaagaccattgaaaacacagatatttacattacaattcaca
acaggtagcaaaattgggaggtattggagtagcaaccaaaaataattcca
tggttggaggtcaacacaacatgagaactgtattatagggtcgcagtact
gggaaagtgagaccacctgccctagatcattatgtcacttcattgtctgc
caccccaacgggagacacagactcctcatgcttctctgccactggaggtt
tcactgttgtttcaaagcaaggttgtttttaagcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_61469330_61470468
seq2: B6Ng01-212F05.g_70_1205 (reverse)

seq1  TTGCTTTAAAAACAA-CTTGCTTTTGAAAACAACAGTGAAACCTCCAAGG  49
      |||| |||||||||| ||||||||   ||||||||||||||||||||  |
seq2  TTGC-TTAAAAACAACCTTGCTTT--GAAACAACAGTGAAACCTCCA--G  45

seq1  TTGCAGAG-AGCATGGAGAGGTCTGTGTCTTCCCGTTGGGGTGGCAGACA  98
      | |||||| ||||| |||  ||||||||| ||||||||||||||||||||
seq2  TGGCAGAGAAGCAT-GAGGAGTCTGTGTC-TCCCGTTGGGGTGGCAGACA  93

seq1  ATGAAGTGACATAATGATCTAGGGCAGTGGTTCTCAACTTTCCCAGTACT  148
      |||||||||||||||||||||||||||  | |||| ||||||||||||||
seq2  ATGAAGTGACATAATGATCTAGGGCAGGTGGTCTC-ACTTTCCCAGTACT  142

seq1  GCGACCCTTTAATACAGTTCCTCATGTTGTGGTGACCTCCAACCATGGAA  198
      |||||||| |||||||||| ||||||||||| ||||||||||||||||||
seq2  GCGACCCTATAATACAGTT-CTCATGTTGTGTTGACCTCCAACCATGGAA  191

seq1  TTATTTTT-GTTGCTACTCC-ATACCT-CCAATTTTGCTA-CTGTTGTGA  244
      |||||||| ||||||||||| |||||| |||||||||||| |||||||||
seq2  TTATTTTTGGTTGCTACTCCAATACCTCCCAATTTTGCTACCTGTTGTGA  241

seq1  ATTGTAATGTAAATATCTGTGTTTTTCAATGGTCTTAGTTGACCCTGTAA  294
      ||||||||||||||||||||| ||||||||||||||||| ||||||||||
seq2  ATTGTAATGTAAATATCTGTG-TTTTCAATGGTCTTAGTGGACCCTGTAA  290

seq1  AAGGGTTGTTTGACTCATAAATGGGCTGTAGCCTACAAGTTGAGAA-CCA  343
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGGGTTGTTTGACTCATAAATGGGCTGTAGCCTACAAGTTGAGAACCCA  340

seq1  CTGATCTAGATGAATTTAAAAAGCTTAAAATTTTTGCACTAGGAGTCAGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTAGATGAATTTAAAAAGCTTAAAATTTTTGCACTAGGAGTCAGG  390

seq1  TGGTAGTGGTGCATGCCTTTAATCCCAGCACTTGGGAGGCAGGGGCAGGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTGGTGCATGCCTTTAATCCCAGCACTTGGGAGGCAGGGGCAGGC  440

seq1  AGATCTCTGTGAGTTTGAGGTCAGCCTGATCTAAAAAACAATTTTTTTTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCTGTGAGTTTGAGGTCAGCCTGATCTAAAAAACAATTTTTTTTT  490

seq1  TTTTTTTTTTTGCGGTAGTCCAGATGGCACTCTTGATGTTGTTGAAGCGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTGCGGTAGTCCAGATGGCACTCTTGATGTTGTTGAAGCGA  540

seq1  TTGCCTGGACAGAATTGGAAATCCTATCTCAAAATGAATAAATGAAAAAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGGACAGAATTGGAAATCCTATCTCAAAATGAATAAATGAAAAAT  590

seq1  AATCTGTTGCATGGCCCAGAAACTCCCTTTATAGCCAGATAGGGCTCTGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTTGCATGGCCCAGAAACTCCCTTTATAGCCAGATAGGGCTCTGA  640

seq1  AGCATCTAGCAGCAGGTCCTAGGTCTAGGTCTAGACTCCAGCTAATCATG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTAGCAGCAGGTCCTAGGTCTAGGTCTAGACTCCAGCTAATCATG  690

seq1  AGAAAGCAAACAGCCAGGCAGACAGGATGGGCTCCTCCAGGCAGCTGTCC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCAAACAGCCAGGCAGACAGGATGGGCTCCTCCAGGCAGCTGTCC  740

seq1  TTCTGGGGGGTGCACAGAGTATGAATTAGATACAGAAGTGAACCTGAATG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGGGGTGCACAGAGTATGAATTAGATACAGAAGTGAACCTGAATG  790

seq1  GGCGTGGTGGAACAGCCACGATCTGAGCACTGGAGAGGCTGTAGCCCTAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGGTGGAACAGCCACGATCTGAGCACTGGAGAGGCTGTAGCCCTAC  840

seq1  CCCTCCGAGGGAGGGCTGGGTGGAGGTGGGGCCGAAGCCCATGAGGACTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCGAGGGAGGGCTGGGTGGAGGTGGGGCCGAAGCCCATGAGGACTT  890

seq1  GCTAAGGCTGTCCAAGTGCAAAATCACATTCTCTTTGTTTATTTGCATGT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGGCTGTCCAAGTGCAAAATCACATTCTCTTTGTTTATTTGCATGT  940

seq1  TCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  990

seq1  TAAAATTAGACTTATTAGTGTGTGTGTGTGTCCCAGGGATCAAACCCAGG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTAGACTTATTAGTGTGTGTGTGTGTCCCAGGGATCAAACCCAGG  1040

seq1  CCATCAAGTGCTTTTATCTACTGAGCCATCTCCCTGGCCCTCTTTCTTGT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAAGTGCTTTTATCTACTGAGCCATCTCCCTGGCCCTCTTTCTTGT  1090

seq1  TTTTGAGACAAGGTCTCCTTGTGAAGTCCAGGCTGGCCTTGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGACAAGGTCTCCTTGTGAAGTCCAGGCTGGCCTTGAATTC  1136