BAC Information

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BAC

Clone NameB6Ng01-214F01
Chromosome11 (Build37)
Map Location 44,941,663 - 45,098,384
singlet/doubletdoublet
Overlap geneLOC382510
Upstream geneIl12b, Ublcp1, 3732413I11Rik, Ebf1
Downstream geneLOC633082, Clint1, Lsm11, Thg1l, Sox30, LOC667037, LOC100039624, Adam19, 9530066K23Rik, Cyfip2, C030019I05Rik, LOC100038833
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214F01.bB6Ng01-214F01.g
ACCGA031596GA031597
length911327
definitionB6Ng01-214F01.b B6Ng01-214F01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,941,663 - 44,942,571)(45,098,058 - 45,098,384)
sequence
gaattccttgacttctaaatgccaggctgctcttgcacccagaaaacccg
taaaatgcaaccaatagaatatcagcagagagtatatataagtgacccta
aaaattccaccagagaactcctaaacctgataaacagcttcagtgaagta
gctggatataaaattaactcaaacaagtcaatggactttctctacacaaa
ggataaacaggttgagaaagaaattagggaaacaacagccttcactcttt
tttttttattacgtattttcctcaattacatttccaatgctatcccaaaa
gtcccccacaccctccccctccactcccctacccacccattcccattttt
tggccctggcattcccctgtactggggcatataaagtttgcctgtccaat
gggcctctctttcctcagaaaattggacatagtactacgggaggatcccg
caatacctctcctgggcatatatccagaagatgtcccaactggtaagaag
gacacatgctccactatgttcatagcacccttatttataatagtcagaac
ctggaaagaacccagatgcccctcaacagaggaatggatacagaaaatct
ggtacatttacacaatggagtactactcagctaataaaaagaatgaattt
atgaaattcctaggcaaatggatggacctggagagcatcatcctgagtga
ggtaacacaatcacaaaagaactcaaatgatatgtactcactgataagtg
gatattagcccagaaacttagtatagagagatataaggtacaatttgcaa
aactcatgaaaccgaagaagaacgaagaccaaagtgtggacactttgccc
cttcttagaattggaaacaatcacccatggaaagagttactgagactaag
gtttggagctt
aagtttagaggactctagtagcttgcctgtcctcttctccatgctcttcc
tccaaagggacatgtcactcaccccagtcagcaaacctgtaaacgtggga
catttgtcatgaaacgggagtgactggcagaatacaccatggtgtcaaaa
tttttcttattgccaagacagtgcatattctgaaattcagacttaagaag
tttagcaccctgaaacatgtcagatatgattaaacctgagtgtattgggg
tgaaagcaacacctgaaatgctcctagtgatgttcgagaccgtgatgaga
aagaggaagaggaggatggtggtgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_44941663_44942571
seq2: B6Ng01-214F01.b_45_954

seq1  GAATTCCTTGACTTCTAAATGCCAGGCTGCTCTTGCACCCAGAAAACCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGACTTCTAAATGCCAGGCTGCTCTTGCACCCAGAAAACCCG  50

seq1  TAAAATGCAACCAATAGAATATCAGCAGAGAGTATATATAAGTGACCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGCAACCAATAGAATATCAGCAGAGAGTATATATAAGTGACCCTA  100

seq1  AAAATTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTCAGTGAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTCAGTGAAGTA  150

seq1  GCTGGATATAAAATTAACTCAAACAAGTCAATGGACTTTCTCTACACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATATAAAATTAACTCAAACAAGTCAATGGACTTTCTCTACACAAA  200

seq1  GGATAAACAGGTTGAGAAAGAAATTAGGGAAACAACAGCCTTCACTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAACAGGTTGAGAAAGAAATTAGGGAAACAACAGCCTTCACTCTTT  250

seq1  TTTTTTTATTACGTATTTTCCTCAATTACATTTCCAATGCTATCCCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTACGTATTTTCCTCAATTACATTTCCAATGCTATCCCAAAA  300

seq1  GTCCCCCACACCCTCCCCCTCCACTCCCCTACCCACCCATTCCCATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCCACACCCTCCCCCTCCACTCCCCTACCCACCCATTCCCATTTTT  350

seq1  TGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCCTGTCCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCCTGTCCAAT  400

seq1  GGGCCTCTCTTTCCTCAGAAAATTGGACATAGTACTACGGGAGGATCCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCTCTTTCCTCAGAAAATTGGACATAGTACTACGGGAGGATCCCG  450

seq1  CAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGAAG  500

seq1  GACACATGCTCCACTATGTTCATAGCACCCTTATTTATAATAGTCAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATGCTCCACTATGTTCATAGCACCCTTATTTATAATAGTCAGAAC  550

seq1  CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATCT  600

seq1  GGTACATTTACACAATGGAGTACTACTCAGCTAATAAAAAGAATGAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATTTACACAATGGAGTACTACTCAGCTAATAAAAAGAATGAATTT  650

seq1  ATGAAATTCCTAGGCAAATGGATGGACCTGGAGAGCATCATCCTGAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTCCTAGGCAAATGGATGGACCTGGAGAGCATCATCCTGAGTGA  700

seq1  GGTAACACAATCACAAAAGAACTCAAATGATATGTACTCACTGATAAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACACAATCACAAAAGAACTCAAATGATATGTACTCACTGATAAGTG  750

seq1  GATATTAGCCCAGAAACTTAGTATAGAGAGATATAAGGTACAATTTGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGCCCAGAAACTTAGTATAGAGAGATATAAGGTACAATTTGCAA  800

seq1  AACTCATGAAACCGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATGAAACCGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCC  850

seq1  CTTCTTAGAATTGGAAACAATCACCCATGGAAAGAGTTACAGAGAC-AAA  899
      |||||||||||||||||||||||||||||||||||||||| ||||| || 
seq2  CTTCTTAGAATTGGAAACAATCACCCATGGAAAGAGTTACTGAGACTAAG  900

seq1  GTTTGGAGCT  909
      ||||||||||
seq2  GTTTGGAGCT  910

seq1: chr11_45098058_45098384
seq2: B6Ng01-214F01.g_76_402 (reverse)

seq1  CATCACCACCATCCTCCTCTTCCTCTTTCTCATCACGGTCTCGAACATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCACCATCCTCCTCTTCCTCTTTCTCATCACGGTCTCGAACATCA  50

seq1  CTAGGAGCATTTCAGGTGTTGCTTTCACCCCAATACACTCAGGTTTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGCATTTCAGGTGTTGCTTTCACCCCAATACACTCAGGTTTAATC  100

seq1  ATATCTGACATGTTTCAGGGTGCTAAACTTCTTAAGTCTGAATTTCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGACATGTTTCAGGGTGCTAAACTTCTTAAGTCTGAATTTCAGAA  150

seq1  TATGCACTGTCTTGGCAATAAGAAAAATTTTGACACCATGGTGTATTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACTGTCTTGGCAATAAGAAAAATTTTGACACCATGGTGTATTCTG  200

seq1  CCAGTCACTCCCGTTTCATGACAAATGTCCCACGTTTACAGGTTTGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCACTCCCGTTTCATGACAAATGTCCCACGTTTACAGGTTTGCTGA  250

seq1  CTGGGGTGAGTGACATGTCCCTTTGGAGGAAGAGCATGGAGAAGAGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTGAGTGACATGTCCCTTTGGAGGAAGAGCATGGAGAAGAGGACA  300

seq1  GGCAAGCTACTAGAGTCCTCTAAACTT  327
      |||||||||||||||||||||||||||
seq2  GGCAAGCTACTAGAGTCCTCTAAACTT  327