BAC Information

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BAC

Clone NameB6Ng01-217C20
Chromosome11 (Build37)
Map Location 27,691,441 - 27,692,181
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666270, LOC100042367, LOC100042377
Downstream geneEG626571, Ccdc85a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217C20.bB6Ng01-217C20.g
ACCGA033658GA033659
length1,142992
definitionB6Ng01-217C20.b B6Ng01-217C20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactaaatccatctgatcctgggatttttcttggttgggagc
tttttaatgacttcatttatttccttttgcaatatgtgcccatttaaccc
ttgatttaactctagattttccagttttatagtaggatctgatgagtttt
gaaatttttctgtttctgttgttatgtctcccttttcatttctggttttg
ttaatttggatactgcctcttggtccattaattagtttggctagaggttt
gtctatttttttgattctctcaaagaaccagtttttggtttacttgattc
ttactattgtttttgtttgtttgtttgttttttgtttgtttgcttctgtt
tggttgatctcaactctgtgtttgaatacttcctgccttctactcctctt
agatgagtttgcttcttttttttttctagagctctcaagtgtgctgttaa
gttgttagtgtaagatctctccagtttctttaccagggcacttagtacta
taaactctccacttagaacctctttcaatgtgtcccatatgtgtgggtat
gatgtgtcaacattttcattaaattcaaggaagtctttcattttttggtt
tattccttccctgaccaagttatcattgagtaaagagtttttcagtttcc
acatgtatgtgcggtttctgtagattttgctgtttttgaagaccagcccc
tttggtggttcttcaaaaaattggacatagtactacctgaggacccagca
atactactcctgggcatatacccagaagatgctccaacatgtaataagga
cacatgttcaactatgttcaaagaagccttattttataatagtcagaagc
tggaaagaaactagatgtcccttctacagagaaatttatacagaaaacgt
gatacatttacacgatggaaccactactcagtcattaaaaagcaaggaat
ttatgaaaatcttagaaaaatggatggaaactaagaaatcaatcatcctg
atgtgaggcacccaatcacaaaagggataacaccatgaatttgtactcat
aataagtggataatttaggctcagaactgcagatccctagttaccattca
gagagacacattaaccctctagaagaagggaattcaaagtgg

gaattcatagttacttgtgcagtaatgatgtcaagattttattattccat
gttctattccctttgtgggcaatagataactgtgaagctgaacagattta
agttggttttaattacttagagtgatgttatttttacatacaaacttgtg
atgaaaatctcccaagaattaacaactaattctagtctatcccaagctat
ttctgatgtgatgccaagaattgtttttcatcaatttcaatctaagaaag
aaattaaagactttctataattcaatgaaaatgaaggcaaaatgtactca
aatgatgagacagattaaaggaaacgataagaaaaaatttcatagtgcta
agtgccttcataaaaaatctaaaaataaactactaactaaataacacacc
ccaaagctgtagaacaaccacaacaacataacacaaacagacccaagagg
tatagatggcaagaaataatcaaaagcagggctaaaattaataaattaga
aacaaagaaaacattacaaagaatcaacaaaagcaacagctttaagaaaa
tcaaagatagacaaccttagcaaaactaaataaaaggcagagagacaata
tccaaatttgcaaaattagaaataaaaagggagacttaacaacagacact
gaggaaaatcaaggaatcattagatcttacttcaaaaggtattacttcac
aaattgaaaaatctaaatgaaatgggtgattttatggatagatttcactt
atcaatgttaggtcaagatcagataaacaacttaaatagtcatcaaatca
gacattaaaatctcccaaccaaaaaataaaaagcccagggccagatagct
tttgaacagaattctaccagactttcaagaagagctaatacctatactct
ttcataatattccataaataaaacgagaaggaatgctgacatacttcatt
ctattgacgctaagtcaccatgatgcagaacacaaaacaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_27691441_27692181
seq2: B6Ng01-217C20.g_68_808

seq1  GAATTCATAGTTACTTGTGCAGTAATGATGTCAAGATTTTATTATTCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGTTACTTGTGCAGTAATGATGTCAAGATTTTATTATTCCAT  50

seq1  GTTCTATTCCCTTTGTGGGCAATAGATAACTGTGAAGCTGAACAGATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATTCCCTTTGTGGGCAATAGATAACTGTGAAGCTGAACAGATTTA  100

seq1  AGTTGGTTTTAATTACTTAGAGTGATGTTATTTTTACATACAAACTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTTTTAATTACTTAGAGTGATGTTATTTTTACATACAAACTTGTG  150

seq1  ATGAAAATCTCCCAAGAATTAACAACTAATTCTAGTCTATCCCAAGCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATCTCCCAAGAATTAACAACTAATTCTAGTCTATCCCAAGCTAT  200

seq1  TTCTGATGTGATGCCAAGAATTGTTTTTCATCAATTTCAATCTAAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGTGATGCCAAGAATTGTTTTTCATCAATTTCAATCTAAGAAAG  250

seq1  AAATTAAAGACTTTCTATAATTCAATGAAAATGAAGGCAAAATGTACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAGACTTTCTATAATTCAATGAAAATGAAGGCAAAATGTACTCA  300

seq1  AATGATGAGACAGATTAAAGGAAACGATAAGAAAAAATTTCATAGTGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGAGACAGATTAAAGGAAACGATAAGAAAAAATTTCATAGTGCTA  350

seq1  AGTGCCTTCATAAAAAATCTAAAAATAAACTACTAACTAAATAACACACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTTCATAAAAAATCTAAAAATAAACTACTAACTAAATAACACACC  400

seq1  CCAAAGCTGTAGAACAACCACAACAACATAACACAAACAGACCCAAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCTGTAGAACAACCACAACAACATAACACAAACAGACCCAAGAGG  450

seq1  TATAGATGGCAAGAAATAATCAAAAGCAGGGCTAAAATTAATAAATTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATGGCAAGAAATAATCAAAAGCAGGGCTAAAATTAATAAATTAGA  500

seq1  AACAAAGAAAACATTACAAAGAATCAACAAAAGCAACAGCTTTAAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGAAAACATTACAAAGAATCAACAAAAGCAACAGCTTTAAGAAAA  550

seq1  TCAAAGATAGACAACCTTAGCAAAACTAAATAAAAGGCAGAGAGACAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGATAGACAACCTTAGCAAAACTAAATAAAAGGCAGAGAGACAATA  600

seq1  TCCAAATTTGCAAAATTAGAAATAAAAAGGGAGACTTAACAACAGACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATTTGCAAAATTAGAAATAAAAAGGGAGACTTAACAACAGACACT  650

seq1  GAGGAAAATCAAGGAATCATTAGATCTTACTTCAAAAGGTATTACTTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAATCAAGGAATCATTAGATCTTACTTCAAAAGGTATTACTTCAC  700

seq1  AAATTGAAAAATCTAAATGAAATGGGTGATTTTATGGATAG  741
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAAAAATCTAAATGAAATGGGTGATTTTATGGATAG  741


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