BAC Information

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BAC

Clone NameB6Ng01-218B14
Chromosome11 (Build37)
Map Location 38,635,441 - 38,636,605
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC276941
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218B14.bB6Ng01-218B14.g
ACCGA034319GA034320
length1,117909
definitionB6Ng01-218B14.b B6Ng01-218B14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttagtaacaatgcccaaaggaaaatgtccctagaaggccaaa
cattgtaagatattattcatttttcttagcattaattggcagacatacta
actgataggctttgttgtgttctgttaacctgccttgtctcctgaattct
ctggcctctgcaactctaccatctgtgactatgcatctgccctcaaagta
cttcatggctcacttttttttctccctttctcattttactcttatagttt
cctatttactttcctcttcctcttcctcttcctcttcctcttcctcttcc
tcttcctcttcctctttctctttctttctctctctctctctctctctctc
tctctctctctctcttcctcttcctcttcctcttcctcttcctcttcatc
ttcatcttcctcttcctctttctctctctctctttctctctctcttctca
ttctcttccctttctctttcttctctttctctttctctttctcttcttca
tctgttcattcattcattcatccattcattcactttacatcctgtttgca
gactccttttcagtcccactcacacaaatccctcatacattgctccctcc
ttttctcctcacgggaagggaagttcccagtgggtacaaacccaccctgg
cacaccaagttacagcaggactaagtgcatccttttcaactgtggccttg
acaagatagtccagataggagatggggatccagtggcaggcaaaaaagtt
agagacatccctcactccaattgttatgagaccaaggtgaacatctgcta
caaatgtgtaaggtctaactcttgcatgctgttttgttgatggatcagtc
tctgtacacagccatgggctcagctaattgactctttagtcttttgtagt
attattgaccttcccacatagtagattatctttatttagctagaatttct
ctttggctttatctaatctacatgataggtatgtattgtagaagagaagc
atgatcaaagagagagtctagacagagtcaagagtaaatgcagttggcat
tgtagcaactcctatacccaatagtctagctaattcatcagcatgatcgc
tatgaagagaaatgtca

gaattcagtaataaacatgtgtgaacctggccttccttcttactccctct
tctaaatcaatctttcttcttcttcttcttcttcttcttcttcttcttct
tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc
ctcctcctcctcctcctcctcctcttcctcctcctcttcttcctcttctt
cctcttcttcctcttcttcctcttcttcctcttcttcctcttctttttgt
ttttcgagacaaggtttctctgtgtagcccttgctgtcctggaactcact
ctgtagaccagtctggcctcaaactcagtaatctgtctgcctcttcaatc
tttcttcttaatcacaaggtgattcttactgttttgtttttttgtttttt
taatgagattagcttaatattgtttataacttcttggtttattcttagta
ggttatatatgactataagatacattttcctaggtttcactttattggat
atatagtttcagagttttcactactgacttcctactgttattgtatctat
atagtgatcattcttgttcagtgtatctctaccatgctatttttctctct
tatattagacattctattacattcatatgttatctcctcctggttcctcc
aatcctaagccatccacacttgtccatcaaccaccactcctgcttctggc
cctgaaatctatagtggcatagagccttcacagacaggctctctccattg
atgactgacaagatcatctctgcacatatggtctggagcatggtcctcat
gtatactctttgtgtgttagtcctgggagctctggtactggttgttgata
atgtgtctctgatggtctgcagtcaagatcaagagataccaatctgacac
tacctacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_38635441_38636605
seq2: B6Ng01-218B14.b_47_1163

seq1  GAATTCATTTAGTAACAATGCCCAAAGGAAAATGTCCCTAGAAGGCCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAGTAACAATGCCCAAAGGAAAATGTCCCTAGAAGGCCAAA  50

seq1  CATTGTAAGATATTATTCATTTTTCTTAGCATTAATTGGCAGACATACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAAGATATTATTCATTTTTCTTAGCATTAATTGGCAGACATACTA  100

seq1  ACTGATAGGCTTTGTTGTGTTCTGTTAACCTGCCTTGTCTCCTGAATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAGGCTTTGTTGTGTTCTGTTAACCTGCCTTGTCTCCTGAATTCT  150

seq1  CTGGCCTCTGCAACTCTACCATCTGTGACTATGCATCTGCCCTCAAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCTGCAACTCTACCATCTGTGACTATGCATCTGCCCTCAAAGTA  200

seq1  CTTCATGGCTCACTTTTTTTTCTCCCTTTCTCATTTTACTCTTATAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGGCTCACTTTTTTTTCTCCCTTTCTCATTTTACTCTTATAGTTT  250

seq1  CCTATTTACTTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTACTTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCC  300

seq1  TCTTCCTCTTCCTCTTTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCTTCCTCTTTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTC  350

seq1  TCTCTCTCTCTCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCATC  400

seq1  TTCATCTTCCTCTTCCTCTTTCTCTCTCTCTCTTTCTCTCTCTCTTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTTCCTCTTCCTCTTTCTCTCTCTCTCTTTCTCTCTCTCTTCTCA  450

seq1  TTCTCTTCCCTTTCTCTTTCTTCTCTTTCTCTTTCTCTTTCTCTTCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCCCTTTCTCTTTCTTCTCTTTCTCTTTCTCTTTCTCTTCTTCA  500

seq1  TCTGTTCATTCATTCATTCATCCATTCATTCACTTTACATCCTGTTTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCATTCATTCATTCATCCATTCATTCACTTTACATCCTGTTTGCA  550

seq1  GACTCCTTTTCAGTCCCACTCACACAAATCCCTCATACATTGCTCCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTTTTCAGTCCCACTCACACAAATCCCTCATACATTGCTCCCTCC  600

seq1  TTTTCTCCTCACGGGAAGGGAAGTTCCCAGTGGGTACAAACCCACCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCTCACGGGAAGGGAAGTTCCCAGTGGGTACAAACCCACCCTGG  650

seq1  CACACCAAGTTACAGCAGGACTAAGTGCATCCTTTTCAACTGTGGCCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAAGTTACAGCAGGACTAAGTGCATCCTTTTCAACTGTGGCCTTG  700

seq1  ACAAGATAGTCCAGATAGGAGATGGGGATCCAGTGGCAGGCAAAAAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATAGTCCAGATAGGAGATGGGGATCCAGTGGCAGGCAAAAAAGTT  750

seq1  AGAGACATCCCTCACTCCAATTGTTATGAGACCAAGGTGAACATCTGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACATCCCTCACTCCAATTGTTATGAGACCAAGGTGAACATCTGCTA  800

seq1  CAAATGTGTAAGGTCTAACTCTTGCATGCTGTTTTGTTGATGGATCAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGTAAGGTCTAACTCTTGCATGCTGTTTTGTTGATGGATCAGTC  850

seq1  TCTGTACACAGCCATGGGCTCAGGCTAATTGACTCTTTAGGTCTTTTTGT  900
      |||||||||||||||||||||| |||||||||||||||| ||| ||||||
seq2  TCTGTACACAGCCATGGGCTCA-GCTAATTGACTCTTTA-GTC-TTTTGT  897

seq1  AGTATTATTGACCTTCCCACATAGTAGATTATCTTTATTTTAGCTAGAAT  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTATTATTGACCTTCCCACATAGTAGATTATCTTTA-TTTAGCTAGAAT  946

seq1  TTCTTCTTTTGGCTTTTTATCTAAATCTACAATGGATTAGGTTATTGGTA  1000
      ||||   ||||||  ||||||| ||||||| |||   |||| |||  |||
seq2  TTCT--CTTTGGC--TTTATCT-AATCTAC-ATG--ATAGG-TAT--GTA  985

seq1  TTTGGTTAGAAAGAGAAAGCCATGATTCAAAAGAGAAGAGTCTAGACAGG  1050
      ||    ||| |||||||   ||||||   |||||| |||||||||||| |
seq2  TT---GTAG-AAGAGAA--GCATGAT--CAAAGAG-AGAGTCTAGACA-G  1025

seq1  AGTCAAAGAGTAAATGCAGTTTGCCCTTTGGTAGGCCAAACATCTTTATT  1100
      |||| |||||||||||||||| ||    | ||||    |||  || ||  
seq2  AGTC-AAGAGTAAATGCAGTTGGC---ATTGTAG---CAACTCCTATA--  1066

seq1  AACCCAAATAGGTCCTTAGGCTTAATTACATCAAGGGCATGATCGCTATG  1150
         || |||| |||  |||   ||||| |||||   ||||||||||||||
seq2  ---CCCAATA-GTC--TAG--CTAATT-CATCA---GCATGATCGCTATG  1104

seq1  AAGAGAAAAATGTCA  1165
      |||||  ||||||||
seq2  AAGAG--AAATGTCA  1117


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