BAC Information

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BAC

Clone NameB6Ng01-218M06
Chromosome11 (Build37)
Map Location 82,038,669 - 82,171,223
singlet/doubletdoublet
Overlap genenone
Upstream geneAccn1, 1700071K01Rik, 5530401A14Rik, Ccl2, Ccl7, Ccl11, Ccl12, Ccl8, Ccl1
Downstream geneTmem132e, Cct6b, Ccdc16, Lig3, Rffl, Rad51l3, Fndc8, Nle1, Unc45b, Slfn5, Set8-ps, Slfn9, Slfn8, LOC668706, Slfn10, Slfn2, Slfn1, Slfn4, Slfn3, LOC100043636, LOC435271, Slfn14, Pex12, Ap2b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218M06.bB6Ng01-218M06.g
ACCGA034808GA034809
length899748
definitionB6Ng01-218M06.b B6Ng01-218M06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,170,325 - 82,171,223)(82,038,669 - 82,039,415)
sequence
gaattcaagttcaagaagtgctcagttgagtaaataaataaattaaaaaa
aaataaaaatccctaaataacctgttgatgttagatccactttctacgca
ttcctagcttttcccagcctcacaaggtctacaggttggaccactacatc
cactgactgccctagagactgggactgtgaagatgccagctcttccagga
ttttatttctcaagagaagctggaaactcaatgtttatgtgaaatccaga
tttgcacatgttgacaactaattcaaaaatttagaagctgtgtgcataca
atgtgtagattttatttggatcctgattcaaaccaccagtatttttttaa
agacattttagagacaattaggggaatttaaacacatacaagatacacga
cactaataaggagtgatgtctcgttttgttagggtgataatggttttgag
gctgttttgtttaaaaaaatccttctctgttagagagatatactgaagta
tttatgggtggaataatgggatgtctagatgtgctttaaagtatttcaga
aacaaagagatgtgtgtcaggggacagatgacatgggttgacaagaatgg
tgacggttattggagctggcaggtgggtgcacacaggctcatcatgcctg
tatcttctctgggtgtgcttgcaaatgtcattaaagaatcagggccctgt
ttgcactgagtgaaatcttgccagttattgggatcttttctcctcagtcc
atcattattctgcctctagcctcacagagatttcagagcatcagtaatgt
gagaaactctggagtgaatgtaggtcaggtttggccatcttctacctggg
agccaaagctggcatcccacctgtttgttttgtttgtttgtttggttgg
gaattctggagtttgatgtcaggaagccacatgttccgctggcaagcacg
acctctgtgtcggttcagggccaccttccctggtgatgagagtgtgaagc
cagagtcaggaggcagcaagggtgggtaagctgggtgggaggagaaataa
aagcagtaagaactggtcgtatcaccatggagggagtatttgatgattgg
gactgtggaggatagaatcaagtgctcaagtacagagaaagggtggcttt
aagaaaagtgggcaagcattggacacgggtctgaaagaacccaccacacc
tcggtgggatgtccaatgagatgtccaatgtatagaaaagaagaaagaca
gaatggggagagatctctccaagcctggaatcacagcacaaacccaggca
cactcagcctggagactctcatcaccgccagcatccacagcctccatgcc
tttgcctaagagtgctcagcctaggaactgaggcatgtggcgtggttgga
gaggggtgttgtcaggagacgacaactgaaagacacagcacaagcagaga
ccatgcagatgttggcactaatgggatggatatcatgctctgtgaggctc
ccgaggatggggaagactgtgaatcctccatgctaccctctgctcaccgt
ctctcatgtgctgtcattttttgtcctgaaacacactctgtggcagtagc
catttgggcttcaaacctgtgtgcctggggtaggggtaggggaaggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_82170325_82171223
seq2: B6Ng01-218M06.b_46_944 (reverse)

seq1  CCAACCAAACAAACAAAC-AAACAAACAGGTGGGATGCCAGCTTTGGCTC  49
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCAACCAAACAAACAAACAAAACAAACAGGTGGGATGCCAGCTTTGGCTC  50

seq1  CCAGGTAGAAGATGGCCAAACCCTGACCTACATTCACTCCAGAGTTTCTC  99
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCAGGTAGAAGATGGCCAAA-CCTGACCTACATTCACTCCAGAGTTTCTC  99

seq1  ACATTACTGATGCTCTGAAATCTCTGTGAGGCTAGAGGCAGAATAATGAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACTGATGCTCTGAAATCTCTGTGAGGCTAGAGGCAGAATAATGAT  149

seq1  GGACTGAGGAGAAAAGATCCCAATAACTGGCAAGATTTCACTCAGTGCAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAGGAGAAAAGATCCCAATAACTGGCAAGATTTCACTCAGTGCAA  199

seq1  ACAGGGCCCTGATTCTTTAATGACATTTGCAAGCACACCCAGAGAAGATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCCCTGATTCTTTAATGACATTTGCAAGCACACCCAGAGAAGATA  249

seq1  CAGGCATGATGAGCCTGTGTGCACCCACCTGCCAGCTCCAATAACCGTCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGATGAGCCTGTGTGCACCCACCTGCCAGCTCCAATAACCGTCA  299

seq1  CCATTCTTGTCAACCCATGTCATCTGTCCCCTGACACACATCTCTTTGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTTGTCAACCCATGTCATCTGTCCCCTGACACACATCTCTTTGTT  349

seq1  TCTGAAATACTTTAAAGCACATCTAGACATCCCATTATTCCACCCATAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATACTTTAAAGCACATCTAGACATCCCATTATTCCACCCATAAA  399

seq1  TACTTCAGTATATCTCTCTAACAGAGAAGGATTTTTTTAAACAAAACAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAGTATATCTCTCTAACAGAGAAGGATTTTTTTAAACAAAACAGC  449

seq1  CTCAAAACCATTATCACCCTAACAAAACGAGACATCACTCCTTATTAGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAACCATTATCACCCTAACAAAACGAGACATCACTCCTTATTAGTG  499

seq1  TCGTGTATCTTGTATGTGTTTAAATTCCCCTAATTGTCTCTAAAATGTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTATCTTGTATGTGTTTAAATTCCCCTAATTGTCTCTAAAATGTCT  549

seq1  TTAAAAAAATACTGGTGGTTTGAATCAGGATCCAAATAAAATCTACACAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAATACTGGTGGTTTGAATCAGGATCCAAATAAAATCTACACAT  599

seq1  TGTATGCACACAGCTTCTAAATTTTTGAATTAGTTGTCAACATGTGCAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCACACAGCTTCTAAATTTTTGAATTAGTTGTCAACATGTGCAAA  649

seq1  TCTGGATTTCACATAAACATTGAGTTTCCAGCTTCTCTTGAGAAATAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTTCACATAAACATTGAGTTTCCAGCTTCTCTTGAGAAATAAAA  699

seq1  TCCTGGAAGAGCTGGCATCTTCACAGTCCCAGTCTCTAGGGCAGTCAGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAAGAGCTGGCATCTTCACAGTCCCAGTCTCTAGGGCAGTCAGTG  749

seq1  GATGTAGTGGTCCAACCTGTAGACCTTGTGAGGCTGGGAAAAGCTAGGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGTGGTCCAACCTGTAGACCTTGTGAGGCTGGGAAAAGCTAGGAA  799

seq1  TGCGTAGAAAGTGGATCTAACATCAACAGGTTATTTAGGGATTTTTATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTAGAAAGTGGATCTAACATCAACAGGTTATTTAGGGATTTTTATTT  849

seq1  TTTTTTAATTTATTTATTTACTCAACTGAGCACTTCTTGAACTTGAATTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATTTATTTATTTACTCAACTGAGCACTTCTTGAACTTGAATTC  899

seq1: chr11_82038669_82039415
seq2: B6Ng01-218M06.g_64_811

seq1  GAATTCTGGAGTTTGATGTCAGGAAGCCACATGTTCCGCTGGCAAGCACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAGTTTGATGTCAGGAAGCCACATGTTCCGCTGGCAAGCACG  50

seq1  ACCTCTGTGTCGGTTCAGGGCCACCTTCCCTGGTGATGAGAGTGTGAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGTGTCGGTTCAGGGCCACCTTCCCTGGTGATGAGAGTGTGAAGC  100

seq1  CAGAGTCAGGAGGCAGCAAGGGTGGGTAAGCTGGGTGGGAGGAGAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCAGGAGGCAGCAAGGGTGGGTAAGCTGGGTGGGAGGAGAAATAA  150

seq1  AAGCAGTAAGAACTGGTCGTATCACCATGGAGGGAGTATTTGATGATTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTAAGAACTGGTCGTATCACCATGGAGGGAGTATTTGATGATTGG  200

seq1  GACTGTGGAGGATAGAATCAAGTGCTCAAGTACAGAGAAAGGGTGGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGGAGGATAGAATCAAGTGCTCAAGTACAGAGAAAGGGTGGCTTT  250

seq1  AAGAAAAGTGGGCAAGCATTGGACACGGGTCTGAAAGAACCCACCACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGTGGGCAAGCATTGGACACGGGTCTGAAAGAACCCACCACACC  300

seq1  TCGGTGGGATGTCCAATGAGATGTCCAATGTATAGAAAAGAAGAAAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGGGATGTCCAATGAGATGTCCAATGTATAGAAAAGAAGAAAGACA  350

seq1  GAATGGGGAGAGATCTCTCCAAGCCTGGAATCACAGCACAAACCCAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGGAGAGATCTCTCCAAGCCTGGAATCACAGCACAAACCCAGGCA  400

seq1  CACTCAGCCTGGAGACTCTCATCACCGCCAGCATCCACAGCCTCCATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGCCTGGAGACTCTCATCACCGCCAGCATCCACAGCCTCCATGCC  450

seq1  TTTGCCTAAGAGTGCTCAGCCTAGGAACTGAGGCATGTGGCGTGGTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTAAGAGTGCTCAGCCTAGGAACTGAGGCATGTGGCGTGGTTGGA  500

seq1  GAGGGGTGTTGTCAGGAGACGACAACTGAAAGACACAGCACAAGCAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGTGTTGTCAGGAGACGACAACTGAAAGACACAGCACAAGCAGAGA  550

seq1  CCATGCAGATGTTGGCACTAATGGGATGGATATCATGCTCTGTGAGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCAGATGTTGGCACTAATGGGATGGATATCATGCTCTGTGAGGCTC  600

seq1  CCGAGGATGGGGAAGACTGTGAATCCTCCATGCTACCCTCTGCTCACCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGATGGGGAAGACTGTGAATCCTCCATGCTACCCTCTGCTCACCGT  650

seq1  CTCTCATGTGCTGTCATTTTTTGTCCTGAAACACACTCTGTGGCAGTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATGTGCTGTCATTTTTTGTCCTGAAACACACTCTGTGGCAGTAGC  700

seq1  CA-TTGGGCTTCGAACCTGTGTGCCTGGGGTAGGGGTAGGGGAAGGCT  747
      || ||||||||| |||||||||||||||||||||||||||||||||||
seq2  CATTTGGGCTTCAAACCTGTGTGCCTGGGGTAGGGGTAGGGGAAGGCT  748