BAC Information

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BAC

Clone NameB6Ng01-222B21
Chromosome11 (Build37)
Map Location 110,717,845 - 110,874,887
singlet/doubletdoublet
Overlap geneKcnj16
Upstream geneLOC100041492, Abca8b, Abca8a, Abca9, Abca6, Abca5, Map2k6, LOC100041523
Downstream geneKcnj2, LOC667003, LOC100041539, LOC100041559, EG629966, LOC629967
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222B21.bB6Ng01-222B21.g
ACCGA037226GA037227
length1,0671,078
definitionB6Ng01-222B21.b B6Ng01-222B21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,873,823 - 110,874,887)(110,717,845 - 110,718,912)
sequence
gaattctcccattttctatatgtggtagaagggaggcatttaccattcct
gagttgtccagtacatgcaaatactctttctagtgttcatttgcttattg
tatttcacagactccacgattctgctccgagaaggataatctccctgcct
tacatcaggcaacgaagggcagttgtcacaaaggacatgcaatctgtgag
gtctacagtctcagtctttggcttatcatagaagtgtctccaaccctgtt
ctaatatgtgattaaattgttgcccttatacatcattgagttgttgacca
gaatgcaccatgggaaagactgtaagctcccagacgaaagaacctcattc
atcttttcatccctatatcacttatagctaatacaagatatggcaggcat
tggctcactaattgtagcttggtggattgagtgagcaaacattggaaaga
cattattatttcttatcaaaggaaataatcaacaccttatcaatcctgac
actattccaaatcccaaatcccaaatcccaatgatccttatttgtcactc
tttaattctcaatctataaatttaaaaataaatctgttcacaaatttctt
tggaacgaccataggcctcagtgtcatagtgaagtgtagctgtgttacag
aattctctagaaatatggaattgaaaaatgttcttggtagtaaagagagt
ttacctaagactaggaatgtagatcagttgagaagagttcttgtccaacc
tgcaggaaaccctgggttcagtcctcaccatcacataaaatgggtgtaat
gatgcacacctatactcctagtatattcttagtagtggaagaaacagaag
ttcaaggtcatacgtggctacataggaagtttgaagacagcctatgctct
accaaatatgtctctaaataagttaaaaaaactagaaaataagagtgtgt
aagttggtctatcactgaatttttaagaaaataaggatactcctggaacc
aaatgcaaatattttttatagagatatgtctaatctgcacatttattatg
tgtacatatacatttat
gaattcttctcttggccaatcccatctttggatttctgggtatctggctt
ccctctagttgaacacataatatagaaatcttaaccttcctagaatcagg
caggagaaaagccaaagcccatcaaactctgactttccattgtccccatt
tccttctgagcttgccataataggtcttgatttctctcttgtttacaatt
tccaagctttgaaagtctctttattatcaaaggccccaccatttacgcac
aggaaggatgactgcacagccctggggtctgtggttaacctgcactattt
gggtatgtccagggaaggagggaaggctggcggtttgggtccagtggaaa
ccctgtctagtgactcggaacttggatggttggttgtgatattgtgtatc
agtagcttaaatcctaaagttgaaatactgtaaaaacagtatcttttcca
gtcttctatgaaatttgtatatccttttctctccactaaggcatcttgat
agttgatcttcttaggtacagtttcagatgcacttttttcttaactttaa
aacaagcttattcatgaactgaccaacttcagaaacgtctttccctaagt
cttgagtgctgttttcagtgtgttagaagagaggaaacttgtggagaaag
atgtcccaaaagatcaccactcaatgcctatctccccttcaatgttctat
tgtaataccaggatacaattcaatgataaagtctataaatggagcagccc
agttaggatggcccatctatcatgttttaaacatggattagttattgata
tcatttttaaatctggacatgttagtaacccagaaaatacaggaaactgt
tagggttgagattagagctctgttttcatttgactgacaaaggcttttta
tctgccttctaggaagcacactttgctaagaccatgatactgtcataatt
gttaggtcagagaaacctctaaattctcttttctttctctcaggaatcag
gaatacacagcctcttcagtcttctttctctggaacataacaagttacta
agcaatgtggtggtgtggtcctttctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_110873823_110874887
seq2: B6Ng01-222B21.b_46_1112 (reverse)

seq1  ATAAATGTATATGTACACAT-ATAAATGTGCAGATTTAGACATATCTCTA  49
      |||||||||||||||||||| ||||||||||||| |||||||||||||||
seq2  ATAAATGTATATGTACACATAATAAATGTGCAGA-TTAGACATATCTCTA  49

seq1  TAAAAAATAATTTGCA-TTGGTTCCAGGAGTATCC-TATTT--CTAAAAA  95
      |||||||| ||||||| |||||||||||||||||| |||||   ||||||
seq2  TAAAAAAT-ATTTGCATTTGGTTCCAGGAGTATCCTTATTTTCTTAAAAA  98

seq1  TTCAGTGATAGACCAACTTACACACCTCTTATTTTCTAGTTTTTTTAACT  145
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTCAGTGATAGACCAACTTACACA-CTCTTATTTTCTAGTTTTTTTAACT  147

seq1  TATTTAGAGACATATTTGGTAGAGCATAGGCTGTCTTCAAACTTCCTATG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGAGACATATTTGGTAGAGCATAGGCTGTCTTCAAACTTCCTATG  197

seq1  TAGCCACGTATGACCTTGAACTTCTGTTTCTTCCACTACTAAGAATATAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACGTATGACCTTGAACTTCTGTTTCTTCCACTACTAAGAATATAC  247

seq1  TAGGAGTATAGGTGTGCATCATTACACCCATTTTATGTGATGGTGAGGAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTATAGGTGTGCATCATTACACCCATTTTATGTGATGGTGAGGAC  297

seq1  TGAACCCAGGGTTTCCTGCAGGTTGGACAAGAACTCTTCTCAACTGATCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCAGGGTTTCCTGCAGGTTGGACAAGAACTCTTCTCAACTGATCT  347

seq1  ACATTCCTAGTCTTAGGTAAACTCTCTTTACTACCAAGAACATTTTTCAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCTAGTCTTAGGTAAACTCTCTTTACTACCAAGAACATTTTTCAA  397

seq1  TTCCATATTTCTAGAGAATTCTGTAACACAGCTACACTTCACTATGACAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATATTTCTAGAGAATTCTGTAACACAGCTACACTTCACTATGACAC  447

seq1  TGAGGCCTATGGTCGTTCCAAAGAAATTTGTGAACAGATTTATTTTTAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCTATGGTCGTTCCAAAGAAATTTGTGAACAGATTTATTTTTAAA  497

seq1  TTTATAGATTGAGAATTAAAGAGTGACAAATAAGGATCATTGGGATTTGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGATTGAGAATTAAAGAGTGACAAATAAGGATCATTGGGATTTGG  547

seq1  GATTTGGGATTTGGAATAGTGTCAGGATTGATAAGGTGTTGATTATTTCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGGATTTGGAATAGTGTCAGGATTGATAAGGTGTTGATTATTTCC  597

seq1  TTTGATAAGAAATAATAATGTCTTTCCAATGTTTGCTCACTCAATCCACC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAAGAAATAATAATGTCTTTCCAATGTTTGCTCACTCAATCCACC  647

seq1  AAGCTACAATTAGTGAGCCAATGCCTGCCATATCTTGTATTAGCTATAAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACAATTAGTGAGCCAATGCCTGCCATATCTTGTATTAGCTATAAG  697

seq1  TGATATAGGGATGAAAAGATGAATGAGGTTCTTTCGTCTGGGAGCTTACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATAGGGATGAAAAGATGAATGAGGTTCTTTCGTCTGGGAGCTTACA  747

seq1  GTCTTTCCCATGGTGCATTCTGGTCAACAACTCAATGATGTATAAGGGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCCCATGGTGCATTCTGGTCAACAACTCAATGATGTATAAGGGCA  797

seq1  ACAATTTAATCACATATTAGAACAGGGTTGGAGACACTTCTATGATAAGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTAATCACATATTAGAACAGGGTTGGAGACACTTCTATGATAAGC  847

seq1  CAAAGACTGAGACTGTAGACCTCACAGATTGCATGTCCTTTGTGACAACT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACTGAGACTGTAGACCTCACAGATTGCATGTCCTTTGTGACAACT  897

seq1  GCCCTTCGTTGCCTGATGTAAGGCAGGGAGATTATCCTTCTCGGAGCAGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCGTTGCCTGATGTAAGGCAGGGAGATTATCCTTCTCGGAGCAGA  947

seq1  ATCGTGGAGTCTGTGAAATACAATAAGCAAATGAACACTAGAAAGAGTAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGGAGTCTGTGAAATACAATAAGCAAATGAACACTAGAAAGAGTAT  997

seq1  TTGCATGTACTGGACAACTCAGGAATGGTAAATGCCTCCCTTCTACCACA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGTACTGGACAACTCAGGAATGGTAAATGCCTCCCTTCTACCACA  1047

seq1  TATAGAAAATGGGAGAATTC  1065
      ||||||||||||||||||||
seq2  TATAGAAAATGGGAGAATTC  1067

seq1: chr11_110717845_110718912
seq2: B6Ng01-222B21.g_66_1143

seq1  GAATTCTTCTCTTGGCCAATCCCATCTTTGGATTTCTGGGTATCTGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCTTGGCCAATCCCATCTTTGGATTTCTGGGTATCTGGCTT  50

seq1  CCCTCTAGTTGAACACATAATATAGAAATCTTAACCTTCCTAGAATCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTAGTTGAACACATAATATAGAAATCTTAACCTTCCTAGAATCAGG  100

seq1  CAGGAGAAAAGCCAAAGCCCATCAAACTCTGACTTTCCATTGTCCCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAAAGCCAAAGCCCATCAAACTCTGACTTTCCATTGTCCCCATT  150

seq1  TCCTTCTGAGCTTGCCATAATAGGTCTTGATTTCTCTCTTGTTTACAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGAGCTTGCCATAATAGGTCTTGATTTCTCTCTTGTTTACAATT  200

seq1  TCCAAGCTTTGAAAGTCTCTTTATTATCAAAGGCCCCACCATTTACGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCTTTGAAAGTCTCTTTATTATCAAAGGCCCCACCATTTACGCAC  250

seq1  AGGAAGGATGACTGCACAGCCCTGGGGTCTGTGGTTAACCTGCACTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGATGACTGCACAGCCCTGGGGTCTGTGGTTAACCTGCACTATTT  300

seq1  GGGTATGTCCAGGGAAGGAGGGAAGGCTGGCGGTTTGGGTCCAGTGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGTCCAGGGAAGGAGGGAAGGCTGGCGGTTTGGGTCCAGTGGAAA  350

seq1  CCCTGTCTAGTGACTCGGAACTTGGATGGTTGGTTGTGATATTGTGTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTAGTGACTCGGAACTTGGATGGTTGGTTGTGATATTGTGTATC  400

seq1  AGTAGCTTAAATCCTAAAGTTGAAATACTGTAAAAACAGTATCTTTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTTAAATCCTAAAGTTGAAATACTGTAAAAACAGTATCTTTTCCA  450

seq1  GTCTTCTATGAAATTTGTATATCCTTTTCTCTCCACTAAGGCATCTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTATGAAATTTGTATATCCTTTTCTCTCCACTAAGGCATCTTGAT  500

seq1  AGTTGATCTTCTTAGGTACAGTTTCAGATGCACTTTTTTCTTAACTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATCTTCTTAGGTACAGTTTCAGATGCACTTTTTTCTTAACTTTAA  550

seq1  AACAAGCTTATTCATGAACTGACCAACTTCAGAAACGTCTTTCCCTAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCTTATTCATGAACTGACCAACTTCAGAAACGTCTTTCCCTAAGT  600

seq1  CTTGAGTGCTGTTTTCAGTGTGTTAGAAGAGAGGAAACTTGTGGAGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTGCTGTTTTCAGTGTGTTAGAAGAGAGGAAACTTGTGGAGAAAG  650

seq1  ATGTCCCAAAAGATCACCACTCAATGCCTATCTCCCCTTCAATGTTCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCAAAAGATCACCACTCAATGCCTATCTCCCCTTCAATGTTCTAT  700

seq1  TGTAATACCAGGATACAATTCAATGATAAAGTCTATAAATGGAGCAGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATACCAGGATACAATTCAATGATAAAGTCTATAAATGGAGCAGCCC  750

seq1  AGTTAGGATGGCCCATCTATCATGTTTTAAACATGGATTAGTTATTGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGATGGCCCATCTATCATGTTTTAAACATGGATTAGTTATTGATA  800

seq1  TCATTTTTAAATCTGGACATGTTAGTAACCCAG-AAATACAGGAAACTGT  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCATTTTTAAATCTGGACATGTTAGTAACCCAGAAAATACAGGAAACTGT  850

seq1  TAGGGTTGAGATTAGAGCTCTGTTTTCATTTGACTGACAAAGGCTTTTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTGAGATTAGAGCTCTGTTTTCATTTGACTGACAAAGGCTTTTTA  900

seq1  TCTGCCTTCTAGGAAGCACACTTTGCTAAGACCATGATACTGTCATAATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTCTAGGAAGCACACTTTGCTAAGACCATGATACTGTCATAATT  950

seq1  GTTAGGTCAGAG-AACCTCTAAATTCTCTTTTCTTTCTCTCAGGAATCAG  998
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTTAGGTCAGAGAAACCTCTAAATTCTCTTTTCTTTCTCTCAGGAATCAG  1000

seq1  G-ATACACAGCCTCTTCAGTC-TCTTTCTCT-GAACATA--CAGTTACTA  1043
      | ||||||||||||||||||| ||||||||| |||||||   ||||||||
seq2  GAATACACAGCCTCTTCAGTCTTCTTTCTCTGGAACATAACAAGTTACTA  1050

seq1  AGC-ATGTGGT-GTGTGGT-CTTTCTGC  1068
      ||| ||||||| ||||||| ||||||||
seq2  AGCAATGTGGTGGTGTGGTCCTTTCTGC  1078