BAC Information

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BAC

Clone NameB6Ng01-224H03
Chromosome11 (Build37)
Map Location 82,035,687 - 82,036,863
singlet/doubletsinglet
Overlap genenone
Upstream geneAccn1, 1700071K01Rik, 5530401A14Rik, Ccl2, Ccl7, Ccl11, Ccl12, Ccl8, Ccl1
Downstream geneTmem132e, Cct6b, Ccdc16, Lig3, Rffl, Rad51l3, Fndc8, Nle1, Unc45b, Slfn5, Set8-ps, Slfn9, Slfn8, LOC668706, Slfn10, Slfn2, Slfn1, Slfn4, Slfn3
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224H03.bB6Ng01-224H03.g
ACCGA038903GA038904
length1,2071,186
definitionB6Ng01-224H03.b B6Ng01-224H03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttaatagggacggggtttcgttttcgctctctcttgcttct
tacactcctgctcctgaagatgtaagcaataaagttttgccgcagaagat
tctggtttgttgcgtctttcctggccggtcgtgagaacgcgtctaataac
aattggtgccgaattccgggacgagaaaaaactcgggactggcgcaagga
agatccctcattccagaaccagaactgcgggtcgcggtaataaaggttcc
cgtaaagcagactgttaagaaggattcaactgtatgaattcagaactttt
cagctggggaacgagagtaccagtgagtacagctttacgaggtaagtctg
atcttgaactttctaaggaaattcaagacagtctatcagaagtaaagtgg
aatatgtttggccttgaattttttctggtgttaggagcccttttgttcct
tttcacatgttatcaagtgattaagatagggctgaaaattctagaggaaa
ttcaggacaagctatcagaagtaaagcggggagagagagtaggaacaaag
aggaaatatggtacacaaaataagtatacaggcctttccaagggtcttga
acccgaggaaaagttaaggttaggtaggaatacctggagagagattagaa
gaaaaagaggaaaaagggaaaagaagaaagatcaattagcggaggtctct
aggaaaaggagcctgtgctcatcgctggatgggctcggggagccagctct
tagtagctctgaagcagatgaagaattctcctctgaagaaacagactggg
aggaagaagcagctcattatgagaaaaaagggtaccagccaggtaaagtg
ctagctaatcagttaaggaagccaaaagcggctggcgaagccagtttgct
gattggcctcaggcagtcggcttcaaggtccgccctatgcggagtccccg
ccctgcgtagtgcgtcagccctgcgcagagaggcagtgcgcagactcatc
attcccagagaggacaaagggaaaatacaacaggcatttccggtctttga
agagcgaagggtggggcgttgtccacgcttccgtagatacttacaattaa
gaaattgctgagtcggtcggtaaatacgacaatgctaattaaccttgttg
cagtagacagtctcgtcgcatgtgccactaaacttctgtgctcgtactat
gtgcgca
gaattccctcccttaccgaggctttctttgggaacacttctaacttctgt
gtgacggagcggcccctggttgttgttgttgcgatttatctcttacttca
ttgaactgcagtgttggaacgtggaaagcagaatgctctcatcttttcct
attgactaagtgtctctgctcccccattggtgatgtttttgataaaaaat
ctatccaggagggtcaaatggtcaagttcaaggttcagatgttattactc
tgttcgacacgcccattgggaaagccacccttcgtgtgtagaaggcgcta
gcttgggatgagaagaggaggtgctagagttgaatctggctgtgcctcta
ggtagctctgtgagaccttgaacacatgactcagctccttggagtccagc
atcttgcctggggaaacaatggggtgcctgatacttgagccccacagcat
ccttcctgcagaacttgccctggagggcccactggctcttctcttcagat
tcgtgaagacaggctgtgagacacctgacatcctgggtgtgctgcacagc
ctttctttgaaagtgagtggttttgaggtagaagccatcagtggaagagg
catgagggctgggcctgcttagccacgatttggcaagcagaagaacatga
gcatctctacataagcatcatctctctctttcttccctgtgcccagctca
tcctcagctcagagtcaattccttcaggaagtatcttctcacctctaagt
ctgtgtcaccccacaccatagactcctgagcacacagatcaccgttggcc
gcttctggtgccatgcctgctgttttatccatcgcccccactgtactcag
agcttctgtcttaagaattctcatacagcaaattcaccccaactcctcgt
aggtccaccccaccatcctatccctccagacttgtgttcttgccttttct
ttccctttctcatttatcaactctaaaggtttggctatcccaaatacttc
tggagtatggagccatccactggagtacaatggacctatgaaggagccac
cacccctaaacaaaattgaacttcccttccctcaggaaaccatcagtgtc
ccaagctctcctaagtagtatagggccgtgaaatctcttctagttcaaat
gagggtgaacctgctccgatcttggtgcaggtaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_82035687_82036863
seq2: B6Ng01-224H03.g_66_1251

seq1  GAATTCCCTCCCTTACCGAGGCTTTCTTTGGGAACACTTCTAACTTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCCCTTACCGAGGCTTTCTTTGGGAACACTTCTAACTTCTGT  50

seq1  GTGACGGAGCGGCCCCTGGTTGTTGTTGTTGCGATTTATCTCTTACTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACGGAGCGGCCCCTGGTTGTTGTTGTTGCGATTTATCTCTTACTTCA  100

seq1  TTGAACTGCAGTGTTGGAACGTGGAAAGCAGAATGCTCTCATCTTTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTGCAGTGTTGGAACGTGGAAAGCAGAATGCTCTCATCTTTTCCT  150

seq1  ATTGACTAAGTGTCTCTGCTCCCCCATTGGTGATGTTTTTGATAAAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTAAGTGTCTCTGCTCCCCCATTGGTGATGTTTTTGATAAAAAAT  200

seq1  CTATCCAGGAGGGTCAAATGGTCAAGTTCAAGGTTCAGATGTTATTACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCAGGAGGGTCAAATGGTCAAGTTCAAGGTTCAGATGTTATTACTC  250

seq1  TGTTCGACACGCCCATTGGGAAAGCCACCCTTCGTGTGTAGAAGGCGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCGACACGCCCATTGGGAAAGCCACCCTTCGTGTGTAGAAGGCGCTA  300

seq1  GCTTGGGATGAGAAGAGGAGGTGCTAGAGTTGAATCTGGCTGTGCCTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGATGAGAAGAGGAGGTGCTAGAGTTGAATCTGGCTGTGCCTCTA  350

seq1  GGTAGCTCTGTGAGACCTTGAACACATGACTCAGCTCCTTGGAGTCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTCTGTGAGACCTTGAACACATGACTCAGCTCCTTGGAGTCCAGC  400

seq1  ATCTTGCCTGGGGAAACAATGGGGTGCCTGATACTTGAGCCCCACAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCCTGGGGAAACAATGGGGTGCCTGATACTTGAGCCCCACAGCAT  450

seq1  CCTTCCTGCAGAACTTGCCCTGGAGGGCCCACTGGCTCTTCTCTTCAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTGCAGAACTTGCCCTGGAGGGCCCACTGGCTCTTCTCTTCAGAT  500

seq1  TCGTGAAGACAGGCTGTGAGACACCTGACATCCTGGGTGTGCTGCACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGAAGACAGGCTGTGAGACACCTGACATCCTGGGTGTGCTGCACAGC  550

seq1  CTTTCTTTGAAAGTGAGTGGTTTTGAGGTAGAAGCCATCAGTGGAAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTGAAAGTGAGTGGTTTTGAGGTAGAAGCCATCAGTGGAAGAGG  600

seq1  CATGAGGGCTGGGCCTGCTTAGCCACGATTTGGCAAGCAGAAGAACATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGGCTGGGCCTGCTTAGCCACGATTTGGCAAGCAGAAGAACATGA  650

seq1  GCATCTCTACATAAGCATCATCTCTCTCTTTCTTCCCTGTGCCCAGCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTACATAAGCATCATCTCTCTCTTTCTTCCCTGTGCCCAGCTCA  700

seq1  TCCTCAGCTCAGAGTCAATTCCTTCAGGAAGTATCTTCTCACCTCTAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGCTCAGAGTCAATTCCTTCAGGAAGTATCTTCTCACCTCTAAGT  750

seq1  CTGTGTCACCCCACACCATAGACTCCTGAGCACACAGATCACCGTTGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCACCCCACACCATAGACTCCTGAGCACACAGATCACCGTTGGCC  800

seq1  GCTTCTGGTGCCATGCCTGCTGTTTTATCCATCGCCCCCACTGTACTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGGTGCCATGCCTGCTGTTTTATCCATCGCCCCCACTGTACTCAG  850

seq1  AGCTTCTGTCTTAAAGAATCTCATACAGCAAATTCACCCCAACTCCTCGT  900
      ||||||||||||||  | ||||||||||||||||||||||||||||||||
seq2  AGCTTCTGTCTTAAGAATTCTCATACAGCAAATTCACCCCAACTCCTCGT  900

seq1  AGGTCCACCCCACCATCCTATCCCTCCAGACTT-TGTGTCTGCCTTTTCT  949
      ||||||||||||||||||||||||||||||||| |||   ||||||||||
seq2  AGGTCCACCCCACCATCCTATCCCTCCAGACTTGTGTTCTTGCCTTTTCT  950

seq1  TTCCTTTTCTCATTTTATCAACTCT-AAGGTTT-GCTAT-CCAAATACTC  996
      |||| ||||||| |||||||||||| ||||||| ||||| ||||||||| 
seq2  TTCCCTTTCTCA-TTTATCAACTCTAAAGGTTTGGCTATCCCAAATACTT  999

seq1  CT-GAGTATGGAGCCATCCACTGGAGTACAATGGACCTATG-AGGAGCCA  1044
      || |||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGGAGTATGGAGCCATCCACTGGAGTACAATGGACCTATGAAGGAGCCA  1049

seq1  -CACCCCTAAACAAAATTG-ACT--CCCTCCCTCAGG-AACCATCAAGTG  1089
       |||||||||||||||||| |||  || ||||||||| ||||||| ||||
seq2  CCACCCCTAAACAAAATTGAACTTCCCTTCCCTCAGGAAACCATC-AGTG  1098

seq1  TCCAAAGCTC-CTTAAGTAGGTATAGGGCCGTG-AATCTCTTCTTATGTC  1137
      ||| |||||| | |||||| ||||||||||||| ||||||||| ||  ||
seq2  TCCCAAGCTCTCCTAAGTA-GTATAGGGCCGTGAAATCTCTTC-TAGTTC  1146

seq1  ACAATAGAATGTTGACTGGCT-CGATCTT-GTGCAGGTAACA  1177
      | ||| ||  ||  ||  ||| ||||||| ||||||||||||
seq2  A-AAT-GAGGGTGAACCTGCTCCGATCTTGGTGCAGGTAACA  1186