BAC Information

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BAC

Clone NameB6Ng01-224I05
Chromosome11 (Build37)
Map Location 62,834,625 - 62,835,625
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041558, Specc1, Adora2b, 2410012H22Rik, Ttc19, Ncor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10, Fam18b, Cdrt4
Downstream geneTekt3, Pmp22, LOC433423, LOC100042799, LOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224I05.g
ACCGA038952
length1,002
definitionB6Ng01-224I05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggattagacctggaggtgcaagggaaagcaaacaggttgtcct
gccctacaggagcctagaatctacagaatatgtgaccaggtaaatgggta
ccatccccacagcaagcatatgccaggctgggaaagagtagctttcatct
ctgggatagaggatggctcttgttaaaggcagtgtctcgccctggcttac
tttctgttgctgtgataagcatcataaccaaaagtcacttgggggaaatt
tacacttgcaggtcacagtctgtcacggagggaaaccagagctggaactc
aagcagaaaccacagacactgcttactggctctccccatctctggctgtt
cagcttgcttttctttacagtccagacccacctgcctagggatagagcag
tccgcagtgatctgggccttcccacatcaatcagtagtcaagaaaataac
ctcaaagaaatgcccacaggacaagctgatgtaagaaattcctcaattag
ggttcccactttccagatgtgtctaagctgacaaccaagattaacctcca
cgtctttgatttatatcatgactgagactgtggtaaacccagggccaggg
aaaggccctaactacatgtagaattctcaccctgttccatgtggccaaac
caagattaacctccacatctttgatttatatcatgactgagactgtggta
aatccagggtcagggaaaggcccaaactacatgtagaattctcaccctgt
ttcatgttgccaaaccgcagggatgtggtggagtaatgggaggtgagaga
caccaggccttgcatgggttcaaaagtcacacaaacagctggacctggga
cagagttgctattcacagggaactgtctctggttagcaaatataagacga
aggtcctcaaaaggaagtaggttttggtgattaatttattttaaggtgaa
gggccagggtagacagggaccatggagccaatttcttgctggcgtcggtg
tg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_62834625_62835625
seq2: B6Ng01-224I05.g_65_1066 (reverse)

seq1  CACACAGACGCCAGCAAGAATTGTGCT-CATCGTCCATACTCTACCCT-G  48
      ||||| |||||||||||||| |  ||| ||| |||| |  |||||||| |
seq2  CACACCGACGCCAGCAAGAAATTGGCTCCATGGTCCCT-GTCTACCCTGG  49

seq1  CCCTTCACCTT-AAATAAATTAATCACCAAAACCTACCTTCCTTTTGAGG  97
      ||||||||||| |||||||||||||||||||||||| |||||||||||||
seq2  CCCTTCACCTTAAAATAAATTAATCACCAAAACCTA-CTTCCTTTTGAGG  98

seq1  ACCTTCGTCTTATATTTGCTAACCAGAGACAGTTCCCTGTGAATAGCAAC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCGTCTTATATTTGCTAACCAGAGACAGTTCCCTGTGAATAGCAAC  148

seq1  TCTGTCCCAGGTCCAGCTGTTTGTGTGACCTTTGAACCCATGCAAGGCCT  197
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCTGTCCCAGGTCCAGCTGTTTGTGTGACTTTTGAACCCATGCAAGGCCT  198

seq1  GGTGTCTCTCACCTCCCATTACTCCACCACATCCCTGCGGTTTGGCAACA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTCTCACCTCCCATTACTCCACCACATCCCTGCGGTTTGGCAACA  248

seq1  TGAAACAGGGTGAGAATTCTACATGTAGTTTGGGCCTTTCCCTGACCCTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAGGGTGAGAATTCTACATGTAGTTTGGGCCTTTCCCTGACCCTG  298

seq1  GATTTACCACAGTCTCAGTCATGATATAAATCAAAGATGTGGAGGTTAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACCACAGTCTCAGTCATGATATAAATCAAAGATGTGGAGGTTAAT  348

seq1  CTTGGTTTGGCCACATGGAACAGGGTGAGAATTCTACATGTAGTTAGGGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTGGCCACATGGAACAGGGTGAGAATTCTACATGTAGTTAGGGC  398

seq1  CTTTCCCTGGCCCTGGGTTTACCACAGTCTCAGTCATGATATAAATCAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTGGCCCTGGGTTTACCACAGTCTCAGTCATGATATAAATCAAA  448

seq1  GACGTGGAGGTTAATCTTGGTTGTCAGCTTAGACACATCTGGAAAGTGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGGAGGTTAATCTTGGTTGTCAGCTTAGACACATCTGGAAAGTGGG  498

seq1  AACCCTAATTGAGGAATTTCTTACATCAGCTTGTCCTGTGGGCATTTCTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTAATTGAGGAATTTCTTACATCAGCTTGTCCTGTGGGCATTTCTT  548

seq1  TGAGGTTATTTTCTTGACTACTGATTGATGTGGGAAGGCCCAGATCACTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTATTTTCTTGACTACTGATTGATGTGGGAAGGCCCAGATCACTG  598

seq1  CGGACTGCTCTATCCCTAGGCAGGTGGGTCTGGACTGTAAAGAAAAGCAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTGCTCTATCCCTAGGCAGGTGGGTCTGGACTGTAAAGAAAAGCAA  648

seq1  GCTGAACAGCCAGAGATGGGGAGAGCCAGTAAGCAGTGTCTGTGGTTTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAACAGCCAGAGATGGGGAGAGCCAGTAAGCAGTGTCTGTGGTTTCT  698

seq1  GCTTGAGTTCCAGCTCTGGTTTCCCTCCGTGACAGACTGTGACCTGCAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGTTCCAGCTCTGGTTTCCCTCCGTGACAGACTGTGACCTGCAAG  748

seq1  TGTAAATTTCCCCCAAGTGACTTTTGGTTATGATGCTTATCACAGCAACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTTCCCCCAAGTGACTTTTGGTTATGATGCTTATCACAGCAACA  798

seq1  GAAAGTAAGCCAGGGCGAGACACTGCCTTTAACAAGAGCCATCCTCTATC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTAAGCCAGGGCGAGACACTGCCTTTAACAAGAGCCATCCTCTATC  848

seq1  CCAGAGATGAAAGCTACTCTTTCCCAGCCTGGCATATGCTTGCTGTGGGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATGAAAGCTACTCTTTCCCAGCCTGGCATATGCTTGCTGTGGGG  898

seq1  ATGGTACCCATTTACCTGGTCACATATTCTGTAGATTCTAGGCTCCTGTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTACCCATTTACCTGGTCACATATTCTGTAGATTCTAGGCTCCTGTA  948

seq1  GGGCAGGACAACCTGTTTGCTTTCCCTTGCACCTCCAGGTCTAATCCTGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGACAACCTGTTTGCTTTCCCTTGCACCTCCAGGTCTAATCCTGA  998

seq1  ATTC  1001
      ||||
seq2  ATTC  1002