BAC Information

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BAC

Clone NameB6Ng01-231C22
Chromosome11 (Build37)
Map Location 73,704,585 - 73,883,301
singlet/doubletdoublet
Overlap geneOlfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163
Upstream geneZzef1, Atp2a3, P2rx1, LOC100043309, Camkk1, 1200014J11Rik, Itgae, Gsg2, P2rx5, Tmem93, Tax1bp3, Ctns, Carkl, Trpv1, Trpv3, Aspa, Spata22, Olfr20, Olfr376, Olfr377-ps1, Olfr1, Olfr75-ps1, Olfr378, Olfr379-ps1, Olfr380, Olfr381, Olfr382, Olfr383-ps1, Olfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394
Downstream geneLOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4, E130309D14Rik, 1300001I01Rik, Pafah1b1, Mett10d, Mnt, Rutbc1, Tsr1, Srr, LOC100042478, Smg6, LOC100043429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231C22.bB6Ng01-231C22.g
ACCGA043849GA043850
length1,193943
definitionB6Ng01-231C22.b B6Ng01-231C22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,882,089 - 73,883,301)(73,704,585 - 73,705,465)
sequence
gaattcttgcctcaccattgtctccactgagatattacttttggtttcca
tgtcccactctaaaataccaggattttgagagtttaaagaattacccatg
attatgtatctcaccaggttccttttaacagtgacattgcttcttttgga
ttcattataaaaaacaccatctgttcatatgtaaatatgatacatttgta
acaattctaataccttcacctgtcactgaaggcagctgaattcttaattt
ttcttgttagcgccttaaagcaggtaagaggctaaaaagtaggttacatt
aaaggcatcattaccaagtaatagtttgtcatttactttctacaaagaat
atattgcacagcacaaggagaaacactgttctctcttgcaaaaggcaccc
atatggtttatcatcaatctctagaagaaatactaataagaaatcaaatt
gtgcctcaatgattaattggaattttccatagatttctctttcatttctt
ttttctttttcactctggtaggactttcacatcttagggctctagccatg
gatgaatggattcagacatttcagaaatgcaagatggagttcacaaagag
attacaaaccttattgtgtacttttaaattaacacaaactataccacaaa
caattttgtcttaggaaaaaatatactagactgaaatatatttagactca
tggcacaacatagacagatggaaatatcctgtaaaccaggcttgtagctt
aaggatgacagaatgtactatttcttaaactgtatgggttccttaagcac
acactctgaaatagaaacacattggtttagtaattgggatagtatctttg
tatcccattgcctccatataaccattgaggctgtatgttttgtgcaagga
aacattcctgaccccctaaagaccaccaaggaactgattctaatgcaatc
acagggtctctttaatcgagctcaggtttggggtccctgcaacctgacac
agcagagatgggagccctgagcctagttttagcagcatttatagagtcag
agtgtattctagcctgtacataatcaggattggaatagcattatgcctta
ctgggtactggggtcaacatatctgatatcttttttctcagttgtgatgt
aggattgaactatcaggggaagtctttgttaacctgggggtgt
gaattcaactaacctgagataaaaattcactgcactcccaacctctgaat
gggtcttggtcagtgacctatgctgtagcaatatggattcgaagctgact
gggtttgaggggcctacagagaatggcagagaggcatctctacaccggag
atagcctttctctgtttgcttccctgtatcctaccctccccaccctgtct
ccaccacctccaaacaaggacactgacaatgtgggtctttttacagtcaa
cttctccctgtgaataaagaattgggagacaacggtacaaagggctccag
accaggtaattccttgatataaggagagaaatataaccttttgatacgta
ataatgatataaagatatattgctctattaagacttacaggatactcatg
ttctgtctaacatgggctccacaggaattttgggtttaaatcctggtttg
acaacttgtctcttataagcaggtatagtacttaaagatgggaaatctca
cctgtggttcataactagatagggaatattagtcactgactccaagtaga
gagaacagtgataatcacctagtatgaacaggtattaattaattaataga
agtctgcggctcctggtagagagcacaacagataaatcgtataacagaat
ggctgctctaggcagagagcttaataattaacaattaacaggaattttgg
gttgaaatccttgtttgacaacctgcctctttttttttttggtagttgtt
tttttgttttttgttttgtttgtttgtttgtttttgtttctcaagacagg
gtttctctgtatagccctggctgtcctagaactcactttgtagaccaggc
tagcctcgaactcagaaatctgcctgcctcagcctcccaagtgctgggat
ttaaaggtgtgcgccaccactgcccagcttgacaacctgcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_73882089_73883301
seq2: B6Ng01-231C22.b_46_1238 (reverse)

seq1  ACACCCCCAGGTTA--CAAGACTTCCCCTGATAATTCATATCCTAACAAC  48
      ||||||||||||||   |||||||||||||||| |||| ||||||     
seq2  ACACCCCCAGGTTAACAAAGACTTCCCCTGATAGTTCA-ATCCTA-----  44

seq1  CACCAAACATGAGAAAAAAAAGATATTCAGATTATGGTTTGGCCCCCAGT  98
      || || |  ||||  |||||||||| ||||| ||||   | | |||||||
seq2  CATCACAACTGAG--AAAAAAGATA-TCAGA-TATG---TTGACCCCAGT  87

seq1  A-CCAGTTAAAGGCCATAATGGCTA-TCCAAT-CTGA-TATGTACCAGGC  144
      | |||||  |||| |||||| |||| |||||| |||| |||||| |||||
seq2  ACCCAGT--AAGG-CATAAT-GCTATTCCAATCCTGATTATGTA-CAGGC  132

seq1  TAGATACCACCTTCTTGACTCTATAAATGCTTGCCTAAAACTAGGCTCAG  194
      ||||   |||  || ||||||||||||||||   ||||||||||||||||
seq2  TAGAATACAC--TC-TGACTCTATAAATGCT--GCTAAAACTAGGCTCAG  177

seq1  GGCT-CCATCTTCCTGCTGTGTCAGGGTTTGCAGGGACCCCAAACCTGAG  243
      |||| ||||||  |||||||||||||  ||||||||||||||||||||||
seq2  GGCTCCCATCT--CTGCTGTGTCAGG--TTGCAGGGACCCCAAACCTGAG  223

seq1  CTCGATTAAAGAGACCCTGTGATTGCATTAGAATCAGTTCCTTGGTGGTC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGATTAAAGAGACCCTGTGATTGCATTAGAATCAGTTCCTTGGTGGTC  273

seq1  TTTAGGGGGTCAGGAATGTTTCCTTGCACAAAACATACAGCCTCAATGGT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGGGTCAGGAATGTTTCCTTGCACAAAACATACAGCCTCAATGGT  323

seq1  TATATGGAGGCAATTGGATACAAAGATACTATCCCAATTACTAAACCAAT  393
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TATATGGAGGCAATGGGATACAAAGATACTATCCCAATTACTAAACCAAT  373

seq1  GTGTTTCTATTTCAGAGTGTGTGCTTAAGGAACCCATACAGTTTAAGAAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTATTTCAGAGTGTGTGCTTAAGGAACCCATACAGTTTAAGAAA  423

seq1  TAGTACATTCTGTCATCCTTAAGCTACAAGCCTGGTTTACAGGATATTTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACATTCTGTCATCCTTAAGCTACAAGCCTGGTTTACAGGATATTTC  473

seq1  CATCTGTCTATGTTGTGCCATGAGTCTAAATATATTTCAGTCTAGTATAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTCTATGTTGTGCCATGAGTCTAAATATATTTCAGTCTAGTATAT  523

seq1  TTTTTCCTAAGACAAAATTGTTTGTGGTATAGTTTGTGTTAATTTAAAAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTAAGACAAAATTGTTTGTGGTATAGTTTGTGTTAATTTAAAAG  573

seq1  TACACAATAAGGTTTGTAATCTCTTTGTGAACTCCATCTTGCATTTCTGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATAAGGTTTGTAATCTCTTTGTGAACTCCATCTTGCATTTCTGA  623

seq1  AATGTCTGAATCCATTCATCCATGGCTAGAGCCCTAAGATGTGAAAGTCC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGAATCCATTCATCCATGGCTAGAGCCCTAAGATGTGAAAGTCC  673

seq1  TACCAGAGTGAAAAAGAAAAAAGAAATGAAAGAGAAATCTATGGAAAATT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGAGTGAAAAAGAAAAAAGAAATGAAAGAGAAATCTATGGAAAATT  723

seq1  CCAATTAATCATTGAGGCACAATTTGATTTCTTATTAGTATTTCTTCTAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAATCATTGAGGCACAATTTGATTTCTTATTAGTATTTCTTCTAG  773

seq1  AGATTGATGATAAACCATATGGGTGCCTTTTGCAAGAGAGAACAGTGTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGATGATAAACCATATGGGTGCCTTTTGCAAGAGAGAACAGTGTTT  823

seq1  CTCCTTGTGCTGTGCAATATATTCTTTGTAGAAAGTAAATGACAAACTAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGTGCTGTGCAATATATTCTTTGTAGAAAGTAAATGACAAACTAT  873

seq1  TACTTGGTAATGATGCCTTTAATGTAACCTACTTTTTAGCCTCTTACCTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGTAATGATGCCTTTAATGTAACCTACTTTTTAGCCTCTTACCTG  923

seq1  CTTTAAGGCGCTAACAAGAAAAATTAAGAATTCAGCTGCCTTCAGTGACA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGGCGCTAACAAGAAAAATTAAGAATTCAGCTGCCTTCAGTGACA  973

seq1  GGTGAAGGTATTAGAATTGTTACAAATGTATCATATTTACATATGAACAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGGTATTAGAATTGTTACAAATGTATCATATTTACATATGAACAG  1023

seq1  ATGGTGTTTTTTATAATGAATCCAAAAGAAGCAATGTCACTGTTAAAAGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTTTTTTATAATGAATCCAAAAGAAGCAATGTCACTGTTAAAAGG  1073

seq1  AACCTGGTGAGATACATAATCATGGGTAATTCTTTAAACTCTCAAAATCC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGTGAGATACATAATCATGGGTAATTCTTTAAACTCTCAAAATCC  1123

seq1  TGGTATTTTAGAGTGGGACATGGAAACCAAAAGTAATATCTCAGTGGAGA  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTTAGAGTGGGACATGGAAACCAAAAGTAATATCTCAGTGGAGA  1173

seq1  CAATGGTGAGGCAAGAATTC  1213
      ||||||||||||||||||||
seq2  CAATGGTGAGGCAAGAATTC  1193

seq1: chr11_73704585_73705465
seq2: B6Ng01-231C22.g_68_949

seq1  GAATTCAACTAACCTGAGATAAAAATTCACTGCACTCCCAACCTCTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTAACCTGAGATAAAAATTCACTGCACTCCCAACCTCTGAAT  50

seq1  GGGTCTTGGTCAGTGACCTATGCTGTAGCAATATGGATTCGAAGCTGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTGGTCAGTGACCTATGCTGTAGCAATATGGATTCGAAGCTGACT  100

seq1  GGGTTTGAGGGGCCTACAGAGAATGGCAGAGAGGCATCTCTACACCGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGAGGGGCCTACAGAGAATGGCAGAGAGGCATCTCTACACCGGAG  150

seq1  ATAGCCTTTCTCTGTTTGCTTCCCTGTATCCTACCCTCCCCACCCTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTTTCTCTGTTTGCTTCCCTGTATCCTACCCTCCCCACCCTGTCT  200

seq1  CCACCACCTCCAAACAAGGACACTGACAATGTGGGTCTTTTTACAGTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCTCCAAACAAGGACACTGACAATGTGGGTCTTTTTACAGTCAA  250

seq1  CTTCTCCCTGTGAATAAAGAATTGGGAGACAACGGTACAAAGGGCTCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCCTGTGAATAAAGAATTGGGAGACAACGGTACAAAGGGCTCCAG  300

seq1  ACCAGGTAATTCCTTGATATAAGGAGAGAAATATAACCTTTTGATACGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTAATTCCTTGATATAAGGAGAGAAATATAACCTTTTGATACGTA  350

seq1  ATAATGATATAAAGATATATTGCTCTATTAAGACTTACAGGATACTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATATAAAGATATATTGCTCTATTAAGACTTACAGGATACTCATG  400

seq1  TTCTGTCTAACATGGGCTCCACAGGAATTTTGGGTTTAAATCCTGGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTAACATGGGCTCCACAGGAATTTTGGGTTTAAATCCTGGTTTG  450

seq1  ACAACTTGTCTCTTATAAGCAGGTATAGTACTTAAAGATGGGAAATCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGTCTCTTATAAGCAGGTATAGTACTTAAAGATGGGAAATCTCA  500

seq1  CCTGTGGTTCATAACTAGATAGGGAATATTAGTCACTGACTCCAAGTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGTTCATAACTAGATAGGGAATATTAGTCACTGACTCCAAGTAGA  550

seq1  GAGAACAGTGATAATCACCTAGTATGAACAGGTATTAATTAATTAATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGTGATAATCACCTAGTATGAACAGGTATTAATTAATTAATAGA  600

seq1  AGTCTGCGGCTCCTGGTAGAGAGCACAACAGATAAATCGTATAACAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCGGCTCCTGGTAGAGAGCACAACAGATAAATCGTATAACAGAAT  650

seq1  GGCTGCTCTAGGCAGAGAGCTTAATAATTAACAATTAACAGGAATTTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTCTAGGCAGAGAGCTTAATAATTAACAATTAACAGGAATTTTGG  700

seq1  GTTGAAATCCTTGTTTGACAACCTGCCTC-TTTTTTTTTTGGTAGTTGTT  749
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTTGAAATCCTTGTTTGACAACCTGCCTCTTTTTTTTTTTGGTAGTTGTT  750

seq1  TTTTTGTTTTTTGTTTTGTTTGTTTGTTTGTTTTTGTTTCTCAAGACAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTTGTTTTGTTTGTTTGTTTGTTTTTGTTTCTCAAGACAGG  800

seq1  GTTTCTCTGTATAGCCCTGGCTGTCCTAGAACTCACTTTGTAGACCAGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTGTATAGCCCTGGCTGTCCTAGAACTCACTTTGTAGACCAGGC  850

seq1  TAGCCTCGAACTCAGAAATCTGCCTGCCTCAG  881
      ||||||||||||||||||||||||||||||||
seq2  TAGCCTCGAACTCAGAAATCTGCCTGCCTCAG  882