BAC Information

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BAC

Clone NameB6Ng01-232B05
Chromosome11 (Build37)
Map Location 12,171,415 - 12,316,527
singlet/doubletdoublet
Overlap geneCobl
Upstream geneZpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232B05.bB6Ng01-232B05.g
ACCGA044502GA044503
length5281,107
definitionB6Ng01-232B05.b B6Ng01-232B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,171,415 - 12,171,948)(12,315,423 - 12,316,527)
sequence
tgagtctgaaggccacactccagcccaagtcctttgctgacctctggaca
ctcctcttgccagtcggtaaaataagtataagttggttgtggtaatctct
cgaatctctgatagacttagactattctttgaaatctcaaatcttaagac
atggcaaagactcattcattgtttccccgataactagttctgtatcttaa
gagtggacagcatcaggggctggagaggtggcttagcagttaagagcacg
cactgctcttccagaggtcctgagttcaattcccagtaatcacatggtgg
ctcacaaccatctgtaatgggaactgatgccctcttctggtgtggctgaa
gacagctacagtgtactcatataaataaataaataaataaataaataaat
aaaaattaaaaaagagattgacagcttcatcttattatcctctctctctc
tctctctctctctatctctctctctctctctctctctctctctctgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtg

gaattctagttacccacagctctaatatttgatcttgaggattcttggag
agtttaataggcctctttactaccctattggagataatgaaagaaaaatt
aaaagagaatacaagaagatgcatttagatttacttatgtgtgggtggat
tttggttgaagtctagttagtttagtttgtgttgatttttatttgattta
gttcaaactcacagttcagtgttgaaggtaagtttttgtctgttggatat
aaaaaggtaacacattttcctaggcgctttgcatctaggactcgatttaa
tacaaataacaccttgttctgcagtgacagcatcacaattaattatgaaa
gggcaaattaccctttctctgttctttaataccaaaacagtattcatagt
cttaacttatcttctaaaaatacttggtagcattcaaaaaaataaagcgg
aaactcactgctggccaacatagagtgttttctaatagtaactgtcagag
aatagagcacttggaagctattcggggtatgatgcctttgaggaagaatt
aaaaaaaaaaaggaataaaaacgtctttactttcttttggggaaaatata
taaacacaaatagtgtctgtcggatgagaatagaagtgggaccttcccaa
ataaatatacctctttatatgattttgattgtagatgtagtgttttacat
agtcagaaaacaagggagtgtcaaagtttgaagtgaatcatgaagaagct
gaaaaacaaaaagcacagtctgagtatgtaaagcccgataacccaattga
gacggttctacatagctgcagtgaaaacgtgcatacaactcagtgtcacg
attccttaatgtcctggggaagtgcaagcaacccaggaaggcttaaagca
accttgaaagaacagtaaacaccattctaggcctttcttctacctgattt
cagtggggagcagaagccttttcaaccagttgttgccaggcaaccagtgc
tgtcagcatcagtgctgccaagcaccagtgctaccaggacagctgtgtac
tcacacaccaaagaaatgagctggatcagatttatacctatacaatatgc
ccattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12171415_12171948
seq2: B6Ng01-232B05.b_44_577

seq1  GAATTCTGAGTCTGAAGGCCACACTCCAGCCCAAGTCCTTTGCTGACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGTCTGAAGGCCACACTCCAGCCCAAGTCCTTTGCTGACCTC  50

seq1  TGGACACTCCTCTTGCCAGTCGGTAAAATAAGTATAAGTTGGTTGTGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACTCCTCTTGCCAGTCGGTAAAATAAGTATAAGTTGGTTGTGGTA  100

seq1  ATCTCTCGAATCTCTGATAGACTTAGACTATTCTTTGAAATCTCAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCGAATCTCTGATAGACTTAGACTATTCTTTGAAATCTCAAATCT  150

seq1  TAAGACATGGCAAAGACTCATTCATTGTTTCCCCGATAACTAGTTCTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATGGCAAAGACTCATTCATTGTTTCCCCGATAACTAGTTCTGTA  200

seq1  TCTTAAGAGTGGACAGCATCAGGGGCTGGAGAGGTGGCTTAGCAGTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGAGTGGACAGCATCAGGGGCTGGAGAGGTGGCTTAGCAGTTAAG  250

seq1  AGCACGCACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGTAATCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGCACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGTAATCACA  300

seq1  TGGTGGCTCACAACCATCTGTAATGGGAACTGATGCCCTCTTCTGGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCTCACAACCATCTGTAATGGGAACTGATGCCCTCTTCTGGTGTG  350

seq1  GCTGAAGACAGCTACAGTGTACTCATATAAATAAATAAATAAATAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGACAGCTACAGTGTACTCATATAAATAAATAAATAAATAAATAA  400

seq1  ATAAATAAAAATTAAAAAAGAGATTGACAGCTTCATCTTATTATCCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAAAATTAAAAAAGAGATTGACAGCTTCATCTTATTATCCTCTC  450

seq1  TCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  500
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  500

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  534
      ||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  534


seq1: chr11_12315423_12316527
seq2: B6Ng01-232B05.g_67_1173 (reverse)

seq1  ATAATGTGCATATCTGTATA-GTATAAATACTGAATCCAGCTTCATTCTT  49
      |||||| |||||| |||||| |||||||| ||| ||||||||   |||||
seq2  ATAATGGGCATAT-TGTATAGGTATAAAT-CTG-ATCCAGCTCATTTCTT  47

seq1  TTGTGTGTGGGTACACAGCTGTCCTGGTAGCACTGGTTGCTTGGCAGCAC  99
      | ||||||| |||||||||||||||||||||||||| |||||||||||||
seq2  TGGTGTGTGAGTACACAGCTGTCCTGGTAGCACTGG-TGCTTGGCAGCAC  96

seq1  TGGTTGCCTGGCAGCACTGGTTGCCTGGCAAC-ACTGGTTG-AAAGGCTT  147
      || |   ||| ||||||||||||||||||||| |||||||| ||||||||
seq2  TGAT--GCTGACAGCACTGGTTGCCTGGCAACAACTGGTTGAAAAGGCTT  144

seq1  CTTGCT-CCCACTGAAATCAGGTAGAAGAAAGGCCTAGAATGGTGTTTAC  196
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  C-TGCTCCCCACTGAAATCAGGTAGAAGAAAGGCCTAGAATGGTGTTTAC  193

seq1  TGTTCTTTCAGGGTTGCTTT-AGCCTTCCTGGGTTGCTTGCACTTCCCCA  245
      |||||||||| ||||||||| |||||||||||||||||||||||||||||
seq2  TGTTCTTTCAAGGTTGCTTTAAGCCTTCCTGGGTTGCTTGCACTTCCCCA  243

seq1  GGACATTTAGG-ATCGTGACACTGAGTTGTATGCACGTTTTCACTGCAGC  294
      ||||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  GGACATTAAGGAATCGTGACACTGAGTTGTATGCACGTTTTCACTGCAGC  293

seq1  TATGTAGAACCGTCTCAATTGGGTTATC-GGCTTTACATACTCAGACTGT  343
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TATGTAGAACCGTCTCAATTGGGTTATCGGGCTTTACATACTCAGACTGT  343

seq1  GC-TTTTGTTTTTCAGCTTCTTCATGATTCACTTC-AACTTTGACACTCC  391
      || |||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCTTTTTGTTTTTCAGCTTCTTCATGATTCACTTCAAACTTTGACACTCC  393

seq1  CTTGTTTTCTGACTATGTAAAACACTACATCTACAATCAAAATCATATAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTCTGACTATGTAAAACACTACATCTACAATCAAAATCATATAA  443

seq1  AGAGGTATATTTATTTGGGAAGGTCCCACTTCTATTCTCATCCGACAGAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTATATTTATTTGGGAAGGTCCCACTTCTATTCTCATCCGACAGAC  493

seq1  ACTATTTGTGTTTATATATTTTCCCCAAAAGAAAGTAAAGACGTTTTTAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTGTGTTTATATATTTTCCCCAAAAGAAAGTAAAGACGTTTTTAT  543

seq1  TCCTTTTTTTTTTTAATTCTTCCTCAAAGGCATCATACCCCGAATAGCTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTTTTTTTAATTCTTCCTCAAAGGCATCATACCCCGAATAGCTT  593

seq1  CCAAGTGCTCTATTCTCTGACAGTTACTATTAGAAAACACTCTATGTTGG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGCTCTATTCTCTGACAGTTACTATTAGAAAACACTCTATGTTGG  643

seq1  CCAGCAGTGAGTTTCCGCTTTATTTTTTTGAATGCTACCAAGTATTTTTA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGTGAGTTTCCGCTTTATTTTTTTGAATGCTACCAAGTATTTTTA  693

seq1  GAAGATAAGTTAAGACTATGAATACTGTTTTGGTATTAAAGAACAGAGAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAAGTTAAGACTATGAATACTGTTTTGGTATTAAAGAACAGAGAA  743

seq1  AGGGTAATTTGCCCTTTCATAATTAATTGTGATGCTGTCACTGCAGAACA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAATTTGCCCTTTCATAATTAATTGTGATGCTGTCACTGCAGAACA  793

seq1  AGGTGTTATTTGTATTAAATCGAGTCCTAGATGCAAAGCGCCTAGGAAAA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTATTTGTATTAAATCGAGTCCTAGATGCAAAGCGCCTAGGAAAA  843

seq1  TGTGTTACCTTTTTATATCCAACAGACAAAAACTTACCTTCAACACTGAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTACCTTTTTATATCCAACAGACAAAAACTTACCTTCAACACTGAA  893

seq1  CTGTGAGTTTGAACTAAATCAAATAAAAATCAACACAAACTAAACTAACT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGTTTGAACTAAATCAAATAAAAATCAACACAAACTAAACTAACT  943

seq1  AGACTTCAACCAAAATCCACCCACACATAAGTAAATCTAAATGCATCTTC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCAACCAAAATCCACCCACACATAAGTAAATCTAAATGCATCTTC  993

seq1  TTGTATTCTCTTTTAATTTTTCTTTCATTATCTCCAATAGGGTAGTAAAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTCTCTTTTAATTTTTCTTTCATTATCTCCAATAGGGTAGTAAAG  1043

seq1  AGGCCTATTAAACTCTCCAAGAATCCTCAAGATCAAATATTAGAGCTGTG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTATTAAACTCTCCAAGAATCCTCAAGATCAAATATTAGAGCTGTG  1093

seq1  GGTAACTAGAATTC  1105
      ||||||||||||||
seq2  GGTAACTAGAATTC  1107


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