BAC Information

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BAC

Clone NameB6Ng01-232L08
Chromosome11 (Build37)
Map Location 73,592,496 - 73,593,580
singlet/doubletsinglet
Overlap genenone
Upstream geneCyb5d2, Zzef1, LOC627119, Atp2a3, P2rx1, LOC100043309, Camkk1, 1200014J11Rik, Itgae, Gsg2, P2rx5, Tmem93, Tax1bp3, Ctns, Carkl, Trpv1, Trpv3, Aspa, Spata22, Olfr20, Olfr376, Olfr377-ps1, Olfr1, Olfr75-ps1, Olfr378, Olfr379-ps1, Olfr380, Olfr381, Olfr382, Olfr383-ps1, Olfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389
Downstream geneOlfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4, E130309D14Rik, 1300001I01Rik, Pafah1b1, Mett10d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232L08.bB6Ng01-232L08.g
ACCGA044972GA044973
length1,0881,166
definitionB6Ng01-232L08.b B6Ng01-232L08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggtgagctgaatgaataataactgctagaactatttctttgg
acagtcttatctgctattcaggtaaaaactgtgagatttacagctgaaga
agtaaagtccattgggtcagcaacagcaactatcacaagtgatctttggt
ttgtagtcttttcacataagcctacataaaccatgggccccactcagtca
cagaatacaaataattctgagacacttggtacacaatttcccttatatta
ctctaagtttctgtttttctattaacttctcacattatgaaaggtaagag
ttacttcactctgatataatgttaataaataaattaaatgttaaaaacac
agtaaaacaccttcatagaaataccttgagctgtaatttgaccaaaatgg
attttaagccctataccagtttctataaaaactgtcatgttaggtatgga
tagttgaatatgaactcaagggagggattaaaattaattgacacttatga
agtgttcattgtatatattttttctccatcattatcagtggaatcatatg
tatagtgaaatcatatgaagcataaaaatattagtcattattagtattat
taaaaagagcattgcattttgtacacccaaatactttccataaatacaca
atcacatcttaaagctaatcacagactatcaaaatttaatgttgaggggg
tacttttggtgacttcatattttgaggagaatgaagaagagtaattattt
ggatttaatataaatttcttccttacattttaggctatgtctcaggctac
agaatagccaggaaatcttcatgaatactgggttatgaacaggcatgacc
tttcctgcaagaagtttacagtctgtcaacaatagctggtactgaatgat
aagctatgaaatgagtacaagatggtatgagaccattgtagcaggtctac
tatataggggataccaagaaattataacctcagtataactccataattca
atgtcatattgtggaaaccataaaacgacaagattacacctatagagaga
agatgtgataggttagggagaaatattaagtagaaatg
gaattctcacttgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatcctttatcatcagggaaatgcaaatcaaaacaaacccgagat
tcctcctcacaccagtcagaatggctaagatcaaaaattcaggtgacata
ggatgctggcgtggatgtgaagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggacgatcctgcaataactctcctgggc
atatatccagaagatgcttcaactggtaagatggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcatctattaaaaagaatgaatttatgaaattcctagccaa
atggatagacctggagggcatcttcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtagtcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagacga
aagaatggaccatgtagagactgccatatccagttatctaccctataatc
agcttccaaacgctgacaccattgcatacactagcaagattttatcaaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatctcaggctcccat
ggaggaactagagaaagtaccaaggagctaaagggatctgcaaccctata
gtgaacacatatgaactaaccagtaccccggagcctctgactctagctgc
atagttcaaagaatggcttagtcgcatcactggaagagaggccaattgaa
ccgcaaaccttattgctcaagtaagtacgcagccacgggcacggctggta
gtaatgtcccctgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_73592496_73593580
seq2: B6Ng01-232L08.b_42_1129 (reverse)

seq1  CATTTCTAACTTAATA-TTCT-CCTTACCTATCACATCTTCTCCTCTAT-  47
      ||||||| |||||||| |||| ||| |||||||||||||||| |||||| 
seq2  CATTTCT-ACTTAATATTTCTCCCTAACCTATCACATCTTCT-CTCTATA  48

seq1  GGTGT-ATCTTGTTCGTTTTATGG-TTCCACAATATGACATTGAATTATT  95
      ||||| |||||| ||||||||||| |||||||||||||||||||||||| 
seq2  GGTGTAATCTTG-TCGTTTTATGGTTTCCACAATATGACATTGAATTATG  97

seq1  GAGTTATACTGA-GTTATAATTTCTTTGTAT-CCCTATATAGTTAGACCT  143
      |||||||||||| ||||||||||||| |||| |||||||||| |||||||
seq2  GAGTTATACTGAGGTTATAATTTCTTGGTATCCCCTATATAG-TAGACCT  146

seq1  GCTACAATGGTCTCATACCATCTTGTACTCATTTCATAGCTTATCATTCA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAATGGTCTCATACCATCTTGTACTCATTTCATAGCTTATCATTCA  196

seq1  GTACCAGCTATTGTTGACAGACTGTAAACTTCTTGCAGGAAAGGTCATGC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGCTATTGTTGACAGACTGTAAACTTCTTGCAGGAAAGGTCATGC  246

seq1  CTGTTCATAACCCAGTATTCATGAAGATTTCCTGGCTATTCTGTAGCCTG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCATAACCCAGTATTCATGAAGATTTCCTGGCTATTCTGTAGCCTG  296

seq1  AGACATAGCCTAAAATGTAAGGAAGAAATTTATATTAAATCCAAATAATT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAGCCTAAAATGTAAGGAAGAAATTTATATTAAATCCAAATAATT  346

seq1  ACTCTTCTTCATTCTCCTCAAAATATGAAGTCACCAAAAGTACCCCCTCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTTCATTCTCCTCAAAATATGAAGTCACCAAAAGTACCCCCTCA  396

seq1  ACATTAAATTTTGATAGTCTGTGATTAGCTTTAAGATGTGATTGTGTATT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAATTTTGATAGTCTGTGATTAGCTTTAAGATGTGATTGTGTATT  446

seq1  TATGGAAAGTATTTGGGTGTACAAAATGCAATGCTCTTTTTAATAATACT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAAGTATTTGGGTGTACAAAATGCAATGCTCTTTTTAATAATACT  496

seq1  AATAATGACTAATATTTTTATGCTTCATATGATTTCACTATACATATGAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGACTAATATTTTTATGCTTCATATGATTTCACTATACATATGAT  546

seq1  TCCACTGATAATGATGGAGAAAAAATATATACAATGAACACTTCATAAGT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGATAATGATGGAGAAAAAATATATACAATGAACACTTCATAAGT  596

seq1  GTCAATTAATTTTAATCCCTCCCTTGAGTTCATATTCAACTATCCATACC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTAATTTTAATCCCTCCCTTGAGTTCATATTCAACTATCCATACC  646

seq1  TAACATGACAGTTTTTATAGAAACTGGTATAGGGCTTAAAATCCATTTTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGACAGTTTTTATAGAAACTGGTATAGGGCTTAAAATCCATTTTG  696

seq1  GTCAAATTACAGCTCAAGGTATTTCTATGAAGGTGTTTTACTGTGTTTTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATTACAGCTCAAGGTATTTCTATGAAGGTGTTTTACTGTGTTTTT  746

seq1  AACATTTAATTTATTTATTAACATTATATCAGAGTGAAGTAACTCTTACC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTAATTTATTTATTAACATTATATCAGAGTGAAGTAACTCTTACC  796

seq1  TTTCATAATGTGAGAAGTTAATAGAAAAACAGAAACTTAGAGTAATATAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAATGTGAGAAGTTAATAGAAAAACAGAAACTTAGAGTAATATAA  846

seq1  GGGAAATTGTGTACCAAGTGTCTCAGAATTATTTGTATTCTGTGACTGAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATTGTGTACCAAGTGTCTCAGAATTATTTGTATTCTGTGACTGAG  896

seq1  TGGGGCCCATGGTTTATGTAGGCTTATGTGAAAAGACTACAAACCAAAGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCCATGGTTTATGTAGGCTTATGTGAAAAGACTACAAACCAAAGA  946

seq1  TCACTTGTGATAGTTGCTGTTGCTGACCCAATGGACTTTACTTCTTCAGC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGTGATAGTTGCTGTTGCTGACCCAATGGACTTTACTTCTTCAGC  996

seq1  TGTAAATCTCACAGTTTTTACCTGAATAGCAGATAAGACTGTCCAAAGAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATCTCACAGTTTTTACCTGAATAGCAGATAAGACTGTCCAAAGAA  1046

seq1  ATAGTTCTAGCAGTTATTATTCATTCAGCTCACCTGGAATTC  1085
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCTAGCAGTTATTATTCATTCAGCTCACCTGGAATTC  1088