BAC Information

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BAC

Clone NameB6Ng01-232P21
Chromosome11 (Build37)
Map Location 57,383,933 - 57,531,811
singlet/doubletdoublet
Overlap geneGalnt10
Upstream geneGria1, LOC667878, 1810073G14Rik, Mfap3
Downstream geneSap30l, Hand1, LOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325, Olfr324, 2210407C18Rik, Olfr323, Trim58, Olfr216, OTTMUSG00000005755, Olfr320, LOC668058, Olfr319
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232P21.bB6Ng01-232P21.g
ACCGA045182GA045183
length701967
definitionB6Ng01-232P21.b B6Ng01-232P21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,383,933 - 57,384,633)(57,531,275 - 57,531,811)
sequence
gaattctttccagggtcaagcattctccagctctgttctgtgcttctcca
caatgggtcctagaaagcagagagggaggcacctagcatgacctgagagg
agtctcttctcagcaagaaatgtctttcttcagacttaaccttcctacag
ccaggcatcacagactgtatgtgccctcctctctccaacttgcactgcag
tgggcagaaaaaaaaacagaagcctgtatcagttacttctgttaaggctg
taacaaaatgcctgaggaatgcagcacaaggaaagaaaggtttactctgg
cttagagtctgagtgtacagttgatcatggtgcggaagccccaggagcag
gagccggagagagctggtcatggtgcatccaaaagcaggaagcagagaga
gatgaacactggtactcagtccactttctccttttcatccaatccaggac
ggaagcccacagaatggtgccatcacattcagaatgtattttcccacctc
agtgaaacctagtttcctttttaacacaccctcccagtgtggcccagcgc
tctatatgactctaaatccagtcaagttaacaatgtagatgaatggaacc
atgctggtttttcactaacaaggacctgtcagtgccagatcccttgagga
gaagagcaaggtgatcagatggcgggcgggtgtgtgtgtgtgtgtggggg
g
gaattctgggagaggcaaagtgtgaggggtaacctcagcgttaacttgat
tggacttagcatcacccaggagacacacctttgagagtgtctgagagggc
attaactgagagagcaaagcccaccctgagtgtggatggtaccattcctg
tggtccagggtcccagtcctgacaaaaaggagaatgaacggagtactgtc
tctctctgcttcctgactgtggacccaatgtgacaatgtctcatactcag
ttcctgcccaccatgccacccctgacatgaaggtatgtagccttcttaaa
ccactaactaatatgaacccttcctgcggctggagagatggcttaggggc
tgagagcattggctgcctttcaaaaggacttgggttttattgccagaacc
tacacagtagctcacaagtatctgcaattctagttccaggggattggatg
ttctcttctggatgccacaggcactagggaagtacaaggtacactgacta
catgcagacgaacgcccacacacatcaagaaacaaaaacaaaccatcttc
cttccgtaagttgcttttgatgatgttgtcatagcaatgagaaaagtagt
taatacatatagttaaataagacagtccgggggctggtgagatggctcaa
cagataagagcacccgactgttcttctgaaggtcctgagttcaattccca
gcaccacatggtggctcacaaccatccctaacaagatctggcgccctctt
ctggagtatctgaagacagctaacggtgtacttacatataataaataata
atccttaaaaaaaaaaataaagactgtccgaggtttaataaatagaataa
gaaaagacacacatcactcctaggtgtatacttcacgtgtacagaataat
ctctagtatttaaagagttccgcggattactggtaaggatgccttacgaa
gtcttggggaggaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_57383933_57384633
seq2: B6Ng01-232P21.b_51_751

seq1  GAATTCTTTCCAGGGTCAAGCATTCTCCAGCTCTGTTCTGTGCTTCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCAGGGTCAAGCATTCTCCAGCTCTGTTCTGTGCTTCTCCA  50

seq1  CAATGGGTCCTAGAAAGCAGAGAGGGAGGCACCTAGCATGACCTGAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGTCCTAGAAAGCAGAGAGGGAGGCACCTAGCATGACCTGAGAGG  100

seq1  AGTCTCTTCTCAGCAAGAAATGTCTTTCTTCAGACTTAACCTTCCTACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTTCTCAGCAAGAAATGTCTTTCTTCAGACTTAACCTTCCTACAG  150

seq1  CCAGGCATCACAGACTGTATGTGCCCTCCTCTCTCCAACTTGCACTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCATCACAGACTGTATGTGCCCTCCTCTCTCCAACTTGCACTGCAG  200

seq1  TGGGCAGAAAAAAAAACAGAAGCCTGTATCAGTTACTTCTGTTAAGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGAAAAAAAAACAGAAGCCTGTATCAGTTACTTCTGTTAAGGCTG  250

seq1  TAACAAAATGCCTGAGGAATGCAGCACAAGGAAAGAAAGGTTTACTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAATGCCTGAGGAATGCAGCACAAGGAAAGAAAGGTTTACTCTGG  300

seq1  CTTAGAGTCTGAGTGTACAGTTGATCATGGTGCGGAAGCCCCAGGAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGTCTGAGTGTACAGTTGATCATGGTGCGGAAGCCCCAGGAGCAG  350

seq1  GAGCCGGAGAGAGCTGGTCATGGTGCATCCAAAAGCAGGAAGCAGAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGGAGAGAGCTGGTCATGGTGCATCCAAAAGCAGGAAGCAGAGAGA  400

seq1  GATGAACACTGGTACTCAGTCCACTTTCTCCTTTTCATCCAATCCAGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACACTGGTACTCAGTCCACTTTCTCCTTTTCATCCAATCCAGGAC  450

seq1  GGAAGCCCACAGAATGGTGCCATCACATTCAGAATGTATTTTCCCACCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCCACAGAATGGTGCCATCACATTCAGAATGTATTTTCCCACCTC  500

seq1  AGTGAAACCTAGTTTCCTTTTTAACACACCCTCCCAGTGTGGCCCAGCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAACCTAGTTTCCTTTTTAACACACCCTCCCAGTGTGGCCCAGCGC  550

seq1  TCTATATGACTCTAAATCCAGTCAAGTTAACAATGTAGATGAATGGAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATGACTCTAAATCCAGTCAAGTTAACAATGTAGATGAATGGAACC  600

seq1  ATGCTGGTTTTTCACTAACAAGGACCTGTCAGTGCCAGATCCCTTGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGTTTTTCACTAACAAGGACCTGTCAGTGCCAGATCCCTTGAGGA  650

seq1  GAAGAGCAAGGTGATCAGATGGCGGGCGGGTGTGTGTGTGTGTGTGGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCAAGGTGATCAGATGGCGGGCGGGTGTGTGTGTGTGTGTGGGGG  700

seq1  G  701
      |
seq2  G  701

seq1: chr11_57531275_57531811
seq2: B6Ng01-232P21.g_516_1037 (reverse)

seq1  CACCTCCCTCCCCAAGACTCTTCTGTAGGCATCCTTACCCAGTCATCCCG  50
      ||||| |||||||||||  ||||   ||||||||||| ||||| ||||  
seq2  CACCT-CCTCCCCAAGA--CTTCGTAAGGCATCCTTA-CCAGTAATCC--  44

seq1  GCGGGAACCTCTTCTAAATAACTAGAGATTTTATCTGTACCACCTTTAAG  100
      ||||  | ||||| ||||| |||||||||| | |||||||   | | |||
seq2  GCGG--AACTCTT-TAAAT-ACTAGAGATTAT-TCTGTAC--ACGTGAAG  87

seq1  GTAATACA-CTA-GAGTGATGTGTGTCTTTTCTTATCCTATTTATTAAAC  148
         ||||| ||| ||||||||||||||||||||||| |||||||||||| 
seq2  --TATACACCTAGGAGTGATGTGTGTCTTTTCTTATTCTATTTATTAAA-  134

seq1  CCTCGGACTGTC-TTATTTTTTTTTTTAAAGATTTATTTATTTATTATAT  197
      |||||||| ||| |||||||||||||||| ||||   |||||||||||||
seq2  CCTCGGACAGTCTTTATTTTTTTTTTTAAGGATT--ATTATTTATTATAT  182

seq1  GTAAGTACACTG-TAGCTGTCTTCAGATACTCCAGAAGAGGGCGCCAGAT  246
      |||||||||| | |||||||||||||||||||||||||||||||||||||
seq2  GTAAGTACACCGTTAGCTGTCTTCAGATACTCCAGAAGAGGGCGCCAGAT  232

seq1  CTTGTTAGGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTC  296
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTTGTTAGGGATGGTTGTGAGCCACCATGTGG-TGCTGGGAATTGAACTC  281

seq1  AGGACCTTCAGAAGAACAGTCGGGTGCTCTTATCTGTTGAGCCATCTCAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTTCAGAAGAACAGTCGGGTGCTCTTATCTGTTGAGCCATCTCAC  331

seq1  CAGCCCCCGGACTGTCTTATTTAACTATATGTATTAACTACTTTTCTCAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCCGGACTGTCTTATTTAACTATATGTATTAACTACTTTTCTCAT  381

seq1  TGCTATGACAACATCATCAAAAGCAACTTACGGAAGGAAGATGGTTTGTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGACAACATCATCAAAAGCAACTTACGGAAGGAAGATGGTTTGTT  431

seq1  TTTGTTTCTTGATGTGTGTGGGCGTTCGTCTGCATGTAGTCAGTGTACCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCTTGATGTGTGTGGGCGTTCGTCTGCATGTAGTCAGTGTACCT  481

seq1  TGTACTTCCCTAGTGCCTGTGGCATCCAGAAGAGAACATCC  537
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTCCCTAGTGCCTGTGGCATCCAGAAGAGAACATCC  522