BAC Information

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BAC

Clone NameB6Ng01-233B03
Chromosome11 (Build37)
Map Location 6,916,759 - 7,070,431
singlet/doubletdoublet
Overlap geneAdcy1
Upstream geneCamk2b, Nudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332
Downstream geneLOC100041347, Igfbp1, Igfbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233B03.bB6Ng01-233B03.g
ACCGA045233GA045234
length1,1481,135
definitionB6Ng01-233B03.b B6Ng01-233B03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,069,279 - 7,070,431)(6,916,759 - 6,917,895)
sequence
gaattccagaagacctgcctctggctgttagcaagagcctactcttgggg
aaagccagcaaccccgctcttcatgcagtaagaggtgtcttttcaattct
tcccatactgccctgaccaagacctgaccagctctttgctgtgcccatgg
tatgaacagctcaactgtcatggccctgcccagcggggccaacttcccag
tctggcactcatacttgaaactgctacccaggcttggagttacccataag
ccaggacctaccagggctagagccatccataagccagggcttaccagggc
tggagccacccataagccaggacctaccagggctagagccacccataagc
cagggcttaccagggctggagccacccataagccagttgacttggggctc
agtcatggtgggctcctctgccagcttgacctccatagcttttgctgtga
ccatggaagatactcccaaggtcccgccacctatggcaacactagccagg
cataaccaggtcattaggaagagacagagctcagtgtgccccaaggggtg
gcttgggcacatttcccattggcctcaggccacactcagacaatgcttct
cctccagcccagccacttggctcctctgtctggtcctggctagagccatg
gtggcttgtgacaccctggagcattcttgccttgcatgcatctccagtgg
cccatgggctccactaggcttccttccctgctgctgtggatgacaggtac
tggctagtgggggctggagggagccctggtctgactgggggtccagccgc
gggacacagtgggggccgtctggcctggcctccgcctctcccataaagac
acatccttcgttccaagcgaaaggtcctgccgtggaactgtttccatcag
tcctgccttctagaagtacgtagcatctctcccttgcccttcacgctgac
tttgcctctgcacacaaactggtatgagcactcttcagcagccggtggac
ttcctcagtcactacaggggaaagaggtcagcatactcctaggtcatgat
atgaaggggtcttctggaggttagggacctccagtgaccttggaccttgc
accctcactttcaccacaagctggcctaattcctgtgtgatatttgga
gaattcaggagggatttgtatggcactgaactgcctgtgcagctggatgc
cttagagtggacaggcaaatacttggagggggtgtgtatcaataagtaat
gtctcttcagtaaccgagggacactgagggcccatggcttcatatctcag
gtgtcgaagaacaaggatccagtgattttctttgttcccagactcagtag
attggagaggtgaggcccggcaggcgggcaacattgcaggagcctgcaga
gtgcaggggagccagaattaggctgcaggtggccacagaacgaaggccaa
atgcaacacggggatgttaaaaaatacacacttaattgccacagaaagtg
ctagagaatcggaactatatttggattggaacggcttattggcaaaatat
tgcggcagatgctggaagggcgcttaattggaggaggctgcctgcgcaga
gcccagagattctgcaattgtcggatgcaatttcagctttgcaaaatata
gcatcttttaaaaggttgagggccgccatggaagctgtttatagttgtga
gaggggcatttttcttctcaaaataatttgaaatgctctctaatgactga
aagggaaaataatggtttatcgcagggggtgtgtgcgaaggaaaagactt
tctaagcaactctgtgctccgtgccattatttcctttacccttcacagtg
aaacctctgaaaattaaataatcttttccctttcaaagtaaactaggcat
cccggagagtcagtgaagagaattgattccatcttatctaatgaggacgc
cacgctgaacttgagacaacattcggtcagcatgagggcattgcagtctg
cccatccctcttctttgagagtcccctcaccccatgcattaaccccagtg
attttttttctggaccatgatcccagctacagttggtagacaactgggaa
ggccacctgttcataagtgctctctgttgtcttctgggggtacagaggga
agagacagatgccgtgtagccttgtgcaggttgatatacgctgcagctga
gcgtctcttagttctctggtgattctggaagaaaacacagtaaatacagg
ctgccagagagaaaaattcctcagatcacatctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7069279_7070431
seq2: B6Ng01-233B03.b_46_1193 (reverse)

seq1  TCCAAATATCAC-CAGG-ATTAGG-CAGC-TGTGGTGGAAAGTGA-GGTG  45
      |||||||||||| |||| |||||| |||| |||||| |||||||| ||||
seq2  TCCAAATATCACACAGGAATTAGGCCAGCTTGTGGT-GAAAGTGAGGGTG  49

seq1  CAGGGTCAAAGGTCACTGGGGAGCTCCTACCCTCCAGAAGACCCCCTCAT  95
      || |||| ||||||||||| | |  |||| ||||||||||||||| ||| 
seq2  CAAGGTCCAAGGTCACTGGAG-GTCCCTAACCTCCAGAAGACCCCTTCA-  97

seq1  TATCCATGA-CTAAGAGTAATGCTGACTTCTTTCCCCTGGTAGGTGACTG  144
      ||| ||||| ||| |||| |||||||| |||||||||| ||| |||||||
seq2  TAT-CATGACCTAGGAGT-ATGCTGACCTCTTTCCCCT-GTA-GTGACTG  143

seq1  AGGAAGTCCACCGGCTGCTGAAGAGGTGCTCATACCAGTTTGTGTGCAGA  194
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGGAAGTCCACCGGCTGCTGAAGA-GTGCTCATACCAGTTTGTGTGCAGA  192

seq1  GGCAAAGTCAGCGTGAAGGGCAAGGGAGAGATGCTAACGTACTTTCTAGA  244
      ||||||||||||||||||||||||||||||||||| |||||| |||||||
seq2  GGCAAAGTCAGCGTGAAGGGCAAGGGAGAGATGCT-ACGTAC-TTCTAGA  240

seq1  AGGCAGGACTGATGGAAACAGTTCCCACGGCAGGACCTTTCGCTTGGAAC  294
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGGCAGGACTGATGGAAACAGTT-CCACGGCAGGACCTTTCGCTTGGAAC  289

seq1  GAAGGATGTGTCCTTATGGGAGAGGCGGAGGCCAGGCCAGACGGCCCCCA  344
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAAGGATGTGTCTTTATGGGAGAGGCGGAGGCCAGGCCAGACGGCCCCCA  339

seq1  CTGTGTCCCGCGGCTGGACCCCCAGTCAGACCAGGGCTCCCTCCAGCCCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCCGCGGCTGGACCCCCAGTCAGACCAGGGCTCCCTCCAGCCCC  389

seq1  CACTAGCCAGTACCTGTCATCCACAGCAGCAGGGAAGGAAGCCTAGTGGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCCAGTACCTGTCATCCACAGCAGCAGGGAAGGAAGCCTAGTGGA  439

seq1  GCCCATGGGCCACTGGAGATGCATGCAAGGCAAGAATGCTCCAGGGTGTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGGGCCACTGGAGATGCATGCAAGGCAAGAATGCTCCAGGGTGTC  489

seq1  ACAAGCCACCATGGCTCTAGCCAGGACCAGACAGAGGAGCCAAGTGGCTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCACCATGGCTCTAGCCAGGACCAGACAGAGGAGCCAAGTGGCTG  539

seq1  GGCTGGAGGAGAAGCATTGTCTGAGTGTGGCCTGAGGCCAATGGGAAATG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAGGAGAAGCATTGTCTGAGTGTGGCCTGAGGCCAATGGGAAATG  589

seq1  TGCCCAAGCCACCCCTTGGGGCACACTGAGCTCTGTCTCTTCCTAATGAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAAGCCACCCCTTGGGGCACACTGAGCTCTGTCTCTTCCTAATGAC  639

seq1  CTGGTTATGCCTGGCTAGTGTTGCCATAGGTGGCGGGACCTTGGGAGTAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTATGCCTGGCTAGTGTTGCCATAGGTGGCGGGACCTTGGGAGTAT  689

seq1  CTTCCATGGTCACAGCAAAAGCTATGGAGGTCAAGCTGGCAGAGGAGCCC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGGTCACAGCAAAAGCTATGGAGGTCAAGCTGGCAGAGGAGCCC  739

seq1  ACCATGACTGAGCCCCAAGTCAACTGGCTTATGGGTGGCTCCAGCCCTGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGACTGAGCCCCAAGTCAACTGGCTTATGGGTGGCTCCAGCCCTGG  789

seq1  TAAGCCCTGGCTTATGGGTGGCTCTAGCCCTGGTAGGTCCTGGCTTATGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCCTGGCTTATGGGTGGCTCTAGCCCTGGTAGGTCCTGGCTTATGG  839

seq1  GTGGCTCCAGCCCTGGTAAGCCCTGGCTTATGGATGGCTCTAGCCCTGGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCCAGCCCTGGTAAGCCCTGGCTTATGGATGGCTCTAGCCCTGGT  889

seq1  AGGTCCTGGCTTATGGGTAACTCCAAGCCTGGGTAGCAGTTTCAAGTATG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTGGCTTATGGGTAACTCCAAGCCTGGGTAGCAGTTTCAAGTATG  939

seq1  AGTGCCAGACTGGGAAGTTGGCCCCGCTGGGCAGGGCCATGACAGTTGAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAGACTGGGAAGTTGGCCCCGCTGGGCAGGGCCATGACAGTTGAG  989

seq1  CTGTTCATACCATGGGCACAGCAAAGAGCTGGTCAGGTCTTGGTCAGGGC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCATACCATGGGCACAGCAAAGAGCTGGTCAGGTCTTGGTCAGGGC  1039

seq1  AGTATGGGAAGAATTGAAAAGACACCTCTTACTGCATGAAGAGCGGGGTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGGAAGAATTGAAAAGACACCTCTTACTGCATGAAGAGCGGGGTT  1089

seq1  GCTGGCTTTCCCCAAGAGTAGGCTCTTGCTAACAGCCAGAGGCAGGTCTT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTTTCCCCAAGAGTAGGCTCTTGCTAACAGCCAGAGGCAGGTCTT  1139

seq1  CTGGAATTC  1153
      |||||||||
seq2  CTGGAATTC  1148

seq1: chr11_6916759_6917895
seq2: B6Ng01-233B03.g_66_1200

seq1  GAATTCAGGAGGGATTTGTATGGCACTGAACTGCCTGTGCAGCTGGATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGGGATTTGTATGGCACTGAACTGCCTGTGCAGCTGGATGC  50

seq1  CTTAGAGTGGACAGGCAAATACTTGGAGGGGGTGTGTATCAATAAGTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGTGGACAGGCAAATACTTGGAGGGGGTGTGTATCAATAAGTAAT  100

seq1  GTCTCTTCAGTAACCGAGGGACACTGAGGGCCCATGGCTTCATATCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTCAGTAACCGAGGGACACTGAGGGCCCATGGCTTCATATCTCAG  150

seq1  GTGTCGAAGAACAAGGATCCAGTGATTTTCTTTGTTCCCAGACTCAGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCGAAGAACAAGGATCCAGTGATTTTCTTTGTTCCCAGACTCAGTAG  200

seq1  ATTGGAGAGGTGAGGCCCGGCAGGCGGGCAACATTGCAGGAGCCTGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGAGGTGAGGCCCGGCAGGCGGGCAACATTGCAGGAGCCTGCAGA  250

seq1  GTGCAGGGGAGCCAGAATTAGGCTGCAGGTGGCCACAGAACGAAGGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGGGAGCCAGAATTAGGCTGCAGGTGGCCACAGAACGAAGGCCAA  300

seq1  ATGCAACACGGGGATGTTAAAAAATACACACTTAATTGCCACAGAAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACACGGGGATGTTAAAAAATACACACTTAATTGCCACAGAAAGTG  350

seq1  CTAGAGAATCGGAACTATATTTGGATTGGAACGGCTTATTGGCAAAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAATCGGAACTATATTTGGATTGGAACGGCTTATTGGCAAAATAT  400

seq1  TGCGGCAGATGCTGGAAGGGCGCTTAATTGGAGGAGGCTGCCTGCGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGCAGATGCTGGAAGGGCGCTTAATTGGAGGAGGCTGCCTGCGCAGA  450

seq1  GCCCAGAGATTCTGCAATTGTCGGATGCAATTTCAGCTTTGCAAAATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAGATTCTGCAATTGTCGGATGCAATTTCAGCTTTGCAAAATATA  500

seq1  GCATCTTTTAAAAGGTTGAGGGCCGCCATGGAAGCTGTTTATAGTTGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTTTAAAAGGTTGAGGGCCGCCATGGAAGCTGTTTATAGTTGTGA  550

seq1  GAGGGGCATTTTTCTTCTCAAAATAATTTGAAATGCTCTCTAATGACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGCATTTTTCTTCTCAAAATAATTTGAAATGCTCTCTAATGACTGA  600

seq1  AAGGGAAAATAATGGTTTATCGCAGGGGGTGTGTGCGAAGGAAAAGACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAATAATGGTTTATCGCAGGGGGTGTGTGCGAAGGAAAAGACTT  650

seq1  TCTAAGCAACTCTGTGCTCCGTGCCATTATTTCCTTTACCCTTCACAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCAACTCTGTGCTCCGTGCCATTATTTCCTTTACCCTTCACAGTG  700

seq1  AAACCTCTGAAAATTAAATAATCTTTTCCCTTTCAAAGTAAACTAGGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCTGAAAATTAAATAATCTTTTCCCTTTCAAAGTAAACTAGGCAT  750

seq1  CCCGGAGAGTCAGTGAAGAGAATTGATTCCATCTTATCTAATGAGGACGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGAGAGTCAGTGAAGAGAATTGATTCCATCTTATCTAATGAGGACGC  800

seq1  CACGCTGAACTTGAGACAACATTCGGTCAGCATGAGGGCATTGCAGTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTGAACTTGAGACAACATTCGGTCAGCATGAGGGCATTGCAGTCTG  850

seq1  CCCATCCCTCTTCTTTGAGAGTCCCCTCACCCCATGCATTAACCCCAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCCTCTTCTTTGAGAGTCCCCTCACCCCATGCATTAACCCCAGTG  900

seq1  ATTTTTTTTCTGGACCATGATCCCAGCTACAGTTGGTTAGACAACT-GGA  949
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  ATTTTTTTTCTGGACCATGATCCCAGCTACAGTTGG-TAGACAACTGGGA  949

seq1  AGGCCACCTGTTCATAAGTGCTCTCTGTTGTCTTCTGGGGGTACAGAGGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACCTGTTCATAAGTGCTCTCTGTTGTCTTCTGGGGGTACAGAGGG  999

seq1  AAGAGACAGATGCCGGTGTAGCCTTGTGCAGGGTGATATACGCTGCAGGC  1049
      |||||||||||||| ||||||||||||||||| |||||||||||||| ||
seq2  AAGAGACAGATGCC-GTGTAGCCTTGTGCAGGTTGATATACGCTGCA-GC  1047

seq1  TGAGCGGTCCTCT-TTAGTTCTCTGTGTATCCTG--AG-AAACACAGTAA  1095
      ||||||    ||| |||||||||||   || |||  || ||||||||| |
seq2  TGAGCG----TCTCTTAGTTCTCTGGTGATTCTGGAAGAAAACACAGT-A  1092

seq1  AATACAGGCTG-CAGAGAGAAAAA-TCCTCAAAAACACATCTAC  1137
      ||||||||||| |||||||||||| ||||| | | |||||||||
seq2  AATACAGGCTGCCAGAGAGAAAAATTCCTC-AGATCACATCTAC  1135