MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-233N06
Chromosome	11 (Build37)
Map Location	44,102,399 - 44,243,170
singlet/doublet	doublet
Overlap gene	Il12b
Upstream gene	EG544767, Pttg1, Slu7, LOC100039392, C1qtnf2, Ccnjl, Fabp6, LOC620562, 4631424J17Rik, Ttc1, Adra1b
Downstream gene	Ublcp1, 3732413I11Rik, Ebf1, LOC382510
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG544767 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544767 MGI:3646984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Pttg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30939 MGI:1353578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slu7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:193116 MGI:2385598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039392 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	C1qtnf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69183 MGI:1916433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccnjl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380694 MGI:2685723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fabp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16204 MGI:96565
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620562 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620562
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	4631424J17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70802 MGI:1918052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 67 ESTs, 2 Proteins

name	Ttc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66827 MGI:1914077
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adra1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11548 MGI:104774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il12b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16160 MGI:96540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ublcp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:79560 MGI:1933105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3732413I11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74315 MGI:1921565
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ebf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13591 MGI:95275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC382510 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382510
definition	gene_synonym : Gm1911 note : tRNA-yW synthesizing tRNA-yW synthesizing pseudogene pseudo : _no_value

name	EG544767 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390054 GeneID:544767 MGI:3646984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG544767 transcript_id : XM_622131.3

name	Pttg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305426 GeneID:30939 MGI:1353578
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pituitary tumor-transforming 1 transcript_id : NM_013917.1

name	Slu7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39812155 GeneID:193116 MGI:2385598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLU7 splicing factor homolog (S. cerevisiae) transcript_id : NM_148673.3

name	Slu7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39812172 GeneID:193116 MGI:2385598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLU7 splicing factor homolog (S. cerevisiae) transcript_id : NM_198936.1

name	C1qtnf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801860 GeneID:69183 MGI:1916433
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1q and tumor necrosis factor related protein 2 transcript_id : NM_026979.2

name	Ccnjl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865890 GeneID:380694 MGI:2685723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin J-like transcript_id : NM_001045530.1

name	Fabp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680440 GeneID:16204 MGI:96565
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fatty acid binding protein 6, ileal (gastrotropin) transcript_id : NM_008375.1

name	4631424J17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261857 GeneID:70802 MGI:1918052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 67 ESTs, 2 Proteins product : RIKEN cDNA 4631424J17 gene, transcript variant 1 transcript_id : XM_282969.7

name	Ttc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20452461 GeneID:66827 MGI:1914077
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 1 transcript_id : NM_133795.1

name	Adra1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803355 GeneID:11548 MGI:104774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adrenergic receptor, alpha 1b transcript_id : NM_007416.3

name	Il12b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892765 GeneID:16160 MGI:96540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 12b transcript_id : NM_008352.2

name	Ublcp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382229 GeneID:79560 MGI:1933105
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-like domain containing CTD phosphatase 1 transcript_id : NM_024475.4

name	3732413I11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801878 GeneID:74315 MGI:1921565
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3732413I11 gene transcript_id : NM_028862.2

name	Ebf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131118 GeneID:13591 MGI:95275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : early B-cell factor 1 transcript_id : NM_007897.2

name	EG544767 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63621847 GeneID:544767 MGI:3646984
definition	codon_start : 1 product : hypothetical protein protein_id : XP_622131.1

name	Pttg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305427 CCDS:CCDS24556.1 GeneID:30939 MGI:1353578
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0050875 - cellular physiological process [Evidence ISS]; GO:0051276 - chromosome organization and biogenesis [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]; GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0045143 - homologous chromosome segregation [Evidence IDA]; GO:0007067 - mitosis [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : pituitary tumor-transforming 1 protein_id : NP_038945.1

name	Slu7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27477103 CCDS:CCDS24557.1 GeneID:193116 MGI:2385598
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : step II splicing factor SLU7 protein_id : NP_683514.2

name	Slu7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39812173 CCDS:CCDS24557.1 GeneID:193116 MGI:2385598
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : step II splicing factor SLU7 protein_id : NP_945174.1

name	C1qtnf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037153 CCDS:CCDS24558.1 GeneID:69183 MGI:1916433
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005102 - receptor binding [Evidence IDA] GO_process : GO:0000187 - activation of MAPK activity [Evidence IDA]; GO:0006817 - phosphate transport [Evidence IEA]; GO:0046321 - positive regulation of fatty acid oxidation [Evidence IDA]; GO:0046326 - positive regulation of glucose import [Evidence IDA]; GO:0045725 - positive regulation of glycogen biosynthesis [Evidence IDA]; GO:0051260 - protein homooligomerization [Evidence IDA] codon_start : 1 product : C1q and tumor necrosis factor related protein 2 protein_id : NP_081255.1

name	Ccnjl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865891 CCDS:CCDS24559.1 GeneID:380694 MGI:2685723
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : cyclin J-like protein_id : NP_001038995.1

name	Fabp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680441 CCDS:CCDS24560.1 GeneID:16204 MGI:96565
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0008206 - bile acid metabolism [Evidence TAS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ileal lipid binding protein product : fatty acid binding protein 6, ileal (gastrotropin) protein_id : NP_032401.1

name	4631424J17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63621857 GeneID:70802 MGI:1918052
definition	codon_start : 1 product : hypothetical protein LOC70802 isoform 1 protein_id : XP_282969.4

name	Ttc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20452462 CCDS:CCDS24561.1 GeneID:66827 MGI:1914077
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : tetratricopeptide repeat domain 1 protein_id : NP_598556.1

name	Adra1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66792804 CCDS:CCDS24562.1 GeneID:11548 MGI:104774
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0000299 - integral to membrane of membrane fraction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004937 - alpha1-adrenergic receptor activity [Evidence IDA] [Evidence IMP] [Evidence IGI]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007512 - adult heart development [Evidence IGI]; GO:0048148 - behavioral response to cocaine [Evidence IMP]; GO:0001974 - blood vessel remodeling [Evidence IMP]; GO:0016049 - cell growth [Evidence IGI]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0042593 - glucose homeostasis [Evidence IMP]; GO:0001997 - increased strength of heart contraction by epinephrine-norepinephrine [Evidence IGI]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0045818 - negative regulation of glycogen catabolism [Evidence IMP]; GO:0035265 - organ growth [Evidence IGI]; GO:0045819 - positive regulation of glycogen catabolism [Evidence IMP]; GO:0001996 - positive regulation of heart contraction rate by epinephrine-norepinephrine [Evidence IGI]; GO:0001975 - response to amphetamine [Evidence IMP]; GO:0043278 - response to morphine [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0001987 - vasoconstriction of artery during baroreceptor response to lowering of blood pressure [Evidence IMP]; GO:0008542 - visual learning [Evidence IMP] codon_start : 1 note : alpha1B-adrenergic receptor product : adrenergic receptor, alpha 1b protein_id : NP_031442.2

name	Il12b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680397 CCDS:CCDS24563.1 GeneID:16160 MGI:96540
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0042164 - interleukin-12 alpha subunit binding [Evidence IPI]; GO:0005143 - interleukin-12 receptor binding [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0019735 - antimicrobial humoral response (sensu Vertebrata) [Evidence ISS]; GO:0007166 - cell surface receptor linked signal transduction [Evidence IDA]; GO:0042095 - interferon-gamma biosynthesis [Evidence ISS]; GO:0030101 - natural killer cell activation [Evidence ISS]; GO:0042104 - positive regulation of activated T cell proliferation [Evidence ISS]; GO:0045078 - positive regulation of interferon-gamma biosynthesis [Evidence ISS]; GO:0042035 - regulation of cytokine biosynthesis [Evidence ISS]; GO:0042093 - T-helper cell differentiation [Evidence ISS] codon_start : 1 note : IL-12 p40; IL-23 subunit p40 product : interleukin 12b protein_id : NP_032378.1

name	Ublcp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46575895 CCDS:CCDS24564.1 GeneID:79560 MGI:1933105
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 product : ubiquitin-like domain containing CTD phosphatase 1 protein_id : NP_077795.2

name	3732413I11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037357 CCDS:CCDS24565.1 GeneID:74315 MGI:1921565
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC74315 protein_id : NP_083138.1

name	Ebf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681253 CCDS:CCDS24566.1 GeneID:13591 MGI:95275
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : early B-cell factor 1 protein_id : NP_031923.1

name	LOC100039392 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039392
definition	number : 1 pseudo : _no_value

name	LOC620562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620562
definition	number : 1 pseudo : _no_value

name	LOC620562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620562
definition	number : 2 pseudo : _no_value

name	LOC620562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620562
definition	number : 3 pseudo : _no_value

clone name	MSMg01-483N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332M21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-232E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065H10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-499B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114K10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-233N06.b	B6Ng01-233N06.g
ACC	GA045772	GA045773
length	336	1,163
definition	B6Ng01-233N06.b	B6Ng01-233N06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(44,102,399 - 44,102,734)	(44,242,027 - 44,243,170)
sequence	aaacaccatattactgatggaacccaaaactaggcaagacaatatgctgg caactatcattacttgagggatggtatcattttgtaccacctgatctggg aaagaggtgccaggtggacctgtcatcctaccacggtacagagagcatct gctatctgcactggcaggtggtagtgtggttaacagaaaggtttcccaca gagacttggcacctgctctttcagagtgaaaatggcccctacaggcccac agggagtggcactattaggaagtgtggccttgttgaagtaggtctggtat tgttggaggaagtgtgtcactggagggggtggggct	gaattctggagttgatcctatatcaccatgaggacattaatgggacagat ctgaattgagaagtaggagtaagacaataatattgtgcaaatattaattc caggtttagataattatggtacaattatgttaacattagggaaaatctgg tgttgggaataggaaataccaacacatattataaatcctcaaataaacaa aagctggaagggttaaaagaaaaatacatatccttatttggcaatctgac atgagtatggcaataatgctagaagctagatgcctagctgttaaggttgg aatatgtttctgtaaaattcatatacaggaaactgcaacttgggtgtttt cacatgtattagatgtaggcttccacatatgtcattcttaagatggggtc ctatggcagtaggatgcatccctaatccaatatttcttgttttctcatta aaagtagaactttagacatacatgggaacacaaggagatatcttaagatg gtatagccagaccttcttaggagtcgtgcaagaaagttgaggggcagtag gattgtcagcaaaatagcgagaactaaggagaggctcagtgcagatccat ccctcatagccctcactaattgccagcctattgtctaagctacctggtca tttgtaacaggagccttgggaaactgatacactgggtaacatgttctgca accccaatattaatcacccatagcaagctctttccctcagcctcttaaca aacaatcgtcattgttagtgctccctactgttgagggaattagtgcatgg agtaggtaagctgaccatcttgtggttgcacagttggtatgtggaagaac aggtttttagcctctgtacctgacatcagcggacattcttcctaacggtt tctttcctcctggattctaatttccaaaggactttcttacagtattcgag atgggttgctgggatttaattactttctgttgttgtgaataaaacaccca gccccaagacaacatcgggaagaaaagttgcttttgggccttaatggtcc ttagaatgtggagatttaataatgggtagaagccagatataagcaagagc ttggcactcaccattgttggaggtgagaagagagagaataaaaactattg cagcaaagctttt
quality values	Open. Hide. 13 39 52 39 25 62 42 38 54 62 62 49 56 62 54 62 47 47 62 62 49 62 51 62 47 42 56 56 56 56 56 44 27 38 35 59 62 62 59 59 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 59 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 59 62 62 59 62 56 54 59 62 62 62 62 62 62 59 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 34 62 62 62 62 62 62 62 62 62 62 54 62 62 62 49 62 62 62 62 62 62 62 62 62 23 15 19	Open. Hide. 62 47 31 38 62 62 62 62 62 47 62 56 56 30 18 28 46 38 56 56 62 56 62 47 62 62 59 44 62 59 44 62 49 59 59 62 59 43 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 54 54 62 62 62 62 59 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 51 62 62 62 62 62 62 52 62 62 62 62 62 58 58 49 54 54 54 58 54 58 47 58 58 58 58 58 58 58 58 58 54 58 58 58 54 52 54 54 53 54 58 58 54 58 58 54 58 54 58 58 50 49 54 58 58 58 58 54 54 45 39 58 58 58 58 58 54 58 39 58 58 49 58 58 54 58 58 54 54 58 52 58 58 58 51 51 58 58 58 51 58 58 58 51 58 51 58 54 49 58 38 30 58 58 58 58 53 53 58 54 58 58 51 58 58 49 51 58 53 50 58 49 42 54 40 54 32 58 51 53 58 36 46 35 58 51 40 50 54 58 48 54 40 39 47 52 54 31 58 52 58 58 58 41 39 42 53 53 54 58 58 54 52 50 41 39 40 52 52 58 47 41 58 32 53 43 58 37 50 46 58 58 47 51 37 50 58 41 52 52 32 37 54 49 53 58 33 50 39 52 58 51 50 40 39 39 49 39 29 58 54 30 51 49 51 45 53 54 50 34 36 54 37 52 52 38 39 39 49 39 46 42 49 26 34 35 35 37 32 42 38 52 26 54 51 42 42 37 24 53 34 54 54 16 6 54 36 37 41 39 41 40 37 41 37 33 33 47 35 34 37 32 40 46 34 42 39 53 43 42 54 33 20 44 38 35 34 34 23 32 37 40 38 45 40 21 33 23 25 53 53 29 14 52 31 40 33 32 32 32 53 29 45 22 34 42 32 31 41 31 41 30 53 42 29 32 35 35 41 10 41 34 31 26 49 31 31 32 31 38 35 28 31 41 32 35 31 37 30 40 24 34 36 23 46 29 34 42 23 31 31 30 30 12 40 23 31 31 31 33 31 21 31 25 21 25 31 26 21 30 31 37 33 31 43 42 26 28 38 34 28 37 24 24 46 16 33 34 32 29 21 31 24 46 47 48 28 19 23 31 30 19 16 25 29 26 30 25 22 31 30 31 18 23 37 35 31 20 38 14 12 31 23 24 31 11 16 14 31 32 25 31 25 22 30 27 28 24 48 30 31 31 47 31 18 6 6 17 25 21 31 32 42 33 27 32 31 25 22 9 48 24 29 32 27 44 36 9 7 10 16 19 48 9 24 6 31 24 15 8 24 21 21 22 34 33 8 19 11 11 11 11 36 15 27 21 32 29 32 23 29 10 26 9 34 9 33 8 7 31 19 29 14 47 6 4 9 22 17 24 32 15 17 33 25 19 33 7 7 9 22 31 26 16 8 19 36 8 43 10 15 33 48 15 20 21 8 32 8 8 14 18 14 15 10 7 21 13 3 4 6 38 47 47 27 9 13 9 23 26 18 33 32 8 14 28 17 8 11 26 7 7 11 10 18 14 18 6 26 9 9 9 9 9 21 13 14 13 11 7 10 7 19 5 27 23 9 7 6 6 20 6 16 28 13 6 10 12 24 27 9 14 4 13 3 3 5 4 7 7 24 16 9 8 5 3 3 3 8 11 5 24 7 3 5 5 10 6 4 7 5 4 8 5 6 5 4 7 9 13 8 5 4 20 5 6 9 4 9 12 7 8 16 5 13 11 6 14 7 18 26 8 4 4 4 6 8 17 6 9 5 13 4 3 19 12 12 4 3 10 28 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_44102399_44102734
seq2: B6Ng01-233N06.b_52_387

seq1  AAACACCATATTACTGATGGAACCCAAAACTAGGCAAGACAATATGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCATATTACTGATGGAACCCAAAACTAGGCAAGACAATATGCTGG  50

seq1  CAACTATCATTACTTGAGGGATGGTATCATTTTGTACCACCTGATCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATCATTACTTGAGGGATGGTATCATTTTGTACCACCTGATCTGGG  100

seq1  AAAGAGGTGCCAGGTGGACCTGTCATCCTACCACGGTACAGAGAGCATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGTGCCAGGTGGACCTGTCATCCTACCACGGTACAGAGAGCATCT  150

seq1  GCTATCTGCACTGGCAGGTGGTAGTGTGGTTAACAGAAAGGTTTCCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTGCACTGGCAGGTGGTAGTGTGGTTAACAGAAAGGTTTCCCACA  200

seq1  GAGACTTGGCACCTGCTCTTTCAGAGTGAAAATGGCCCCTACAGGCCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTGGCACCTGCTCTTTCAGAGTGAAAATGGCCCCTACAGGCCCAC  250

seq1  AGGGAGTGGCACTATTAGGAAGTGTGGCCTTGTTGAAGTAGGTCTGGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTGGCACTATTAGGAAGTGTGGCCTTGTTGAAGTAGGTCTGGTAT  300

seq1  TGTTGGAGGAAGTGTGTCACTGGAGGGGGTGGGGCT  336
      ||||||||||||||||||||||||||||||||||||
seq2  TGTTGGAGGAAGTGTGTCACTGGAGGGGGTGGGGCT  336

seq1: chr11_44242027_44243170
seq2: B6Ng01-233N06.g_69_1231 (reverse)

seq1  AAAAGCTTTGCCTGC-ATATGTTTTATTCTCTCTCTTTCTCAC--TCAAC  47
      |||||||||| |||| |||  |||||||||||||| |||||||   ||||
seq2  AAAAGCTTTG-CTGCAATAGTTTTTATTCTCTCTC-TTCTCACCTCCAAC  48

seq1  A--TGTGAGTGCCCAGCTTCCTGCTTATA-CTTGC-TCTA-CCATTA-TA  91
      |   ||||||||| ||| || |||||||| || || |||| |||||| ||
seq2  AATGGTGAGTGCCAAGC-TCTTGCTTATATCTGGCTTCTACCCATTATTA  97

seq1  AATCT-CACATTCT-AGGACCA-TAAG--CCCAAAGCAACTTTTTCTTCC  136
      ||||| |||||||| ||||||| ||||  || |||||||| |||||||||
seq2  AATCTCCACATTCTAAGGACCATTAAGGCCCAAAAGCAAC-TTTTCTTCC  146

seq1  CGATGTTGTCTT-GGGCTTGGTGTTTTA-TCACAACAACAGAAAAGTAAT  184
      |||||||||||| ||||| ||||||||| |||||||||||| ||||||||
seq2  CGATGTTGTCTTGGGGCTGGGTGTTTTATTCACAACAACAG-AAAGTAAT  195

seq1  TAA--TCCAGCAA-CCATCTCGAATACTGTAAG-AAGT-CTTTGG-AATT  228
      |||   ||||||| ||||||||||||||||||| |||| |||||| ||||
seq2  TAAATCCCAGCAACCCATCTCGAATACTGTAAGAAAGTCCTTTGGAAATT  245

seq1  AGAATCCAGGA-GAAAGAAACCGTTAGGAAG-ATGTCCGCTGATGTCAGG  276
      ||||||||||| ||||||||||||||||||| ||||||||||||||||||
seq2  AGAATCCAGGAGGAAAGAAACCGTTAGGAAGAATGTCCGCTGATGTCAGG  295

seq1  TACAGAGGCTAAAAACCTGTTCTTCCACATACCAACTGTGCAACCACAAG  326
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGCTAAAAACCTGTTCTTCCACATACCAACTGTGCAACCACAAG  345

seq1  ATGGTCAGCTTACCTACTCCATGCACTAATTCCCTCAACAGTAGGGAGCA  376
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCAGCTTACCTACTCCATGCACTAATTCCCTCAACAGTAGGGAGCA  395

seq1  CTAACAATGACGATTGTTTGTTAAGAGGCTGAGGGAAAGAGCTTGCTATG  426
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAATGACGATTGTTTGTTAAGAGGCTGAGGGAAAGAGCTTGCTATG  445

seq1  GGTGATTAATATTGGGGTTGCAGAACATGTTACCCAGTGTATCAGTTTCC  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTAATATTGGGGTTGCAGAACATGTTACCCAGTGTATCAGTTTCC  495

seq1  CAAGGCTCCTGTTACAAATGACCAGGTAGCTTAGACAATAGGCTGGCAAT  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTCCTGTTACAAATGACCAGGTAGCTTAGACAATAGGCTGGCAAT  545

seq1  TAGTGAGGGCTATGAGGGATGGATCTGCACTGAGCCTCTCCTTAGTTCTC  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGGGCTATGAGGGATGGATCTGCACTGAGCCTCTCCTTAGTTCTC  595

seq1  GCTATTTTGCTGACAATCCTACTGCCCCTCAACTTTCTTGCACGACTCCT  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTTGCTGACAATCCTACTGCCCCTCAACTTTCTTGCACGACTCCT  645

seq1  AAGAAGGTCTGGCTATACCATCTTAAGATATCTCCTTGTGTTCCCATGTA  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGTCTGGCTATACCATCTTAAGATATCTCCTTGTGTTCCCATGTA  695

seq1  TGTCTAAAGTTCTACTTTTAATGAGAAAACAAGAAATATTGGATTAGGGA  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAAGTTCTACTTTTAATGAGAAAACAAGAAATATTGGATTAGGGA  745

seq1  TGCATCCTACTGCCATAGGACCCCATCTTAAGAATGACATATGTGGAAGC  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCTACTGCCATAGGACCCCATCTTAAGAATGACATATGTGGAAGC  795

seq1  CTACATCTAATACATGTGAAAACACCCAAGTTGCAGTTTCCTGTATATGA  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCTAATACATGTGAAAACACCCAAGTTGCAGTTTCCTGTATATGA  845

seq1  ATTTTACAGAAACATATTCCAACCTTAACAGCTAGGCATCTAGCTTCTAG  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACAGAAACATATTCCAACCTTAACAGCTAGGCATCTAGCTTCTAG  895

seq1  CATTATTGCCATACTCATGTCAGATTGCCAAATAAGGATATGTATTTTTC  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTGCCATACTCATGTCAGATTGCCAAATAAGGATATGTATTTTTC  945

seq1  TTTTAACCCTTCCAGCTTTTGTTTATTTGAGGATTTATAATATGTGTTGG  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACCCTTCCAGCTTTTGTTTATTTGAGGATTTATAATATGTGTTGG  995

seq1  TATTTCCTATTCCCAACACCAGATTTTCCCTAATGTTAACATAATTGTAC  1026
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTATTCCCAACACCAGATTTTCCCTAATGTTAACATAATTGTAC  1045

seq1  CATAATTATCTAAACCTGGAATTAATATTTGCACAATATTATTGTCTTAC  1076
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTATCTAAACCTGGAATTAATATTTGCACAATATTATTGTCTTAC  1095

seq1  TCCTACTTCTCAATTCAGATCTGTCCCATTAATGTCCTCATGGTGATATA  1126
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTTCTCAATTCAGATCTGTCCCATTAATGTCCTCATGGTGATATA  1145

seq1  GGATCAACTCCAGAATTC  1144
      ||||||||||||||||||
seq2  GGATCAACTCCAGAATTC  1163

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