MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-235K08
Chromosome	11 (Build37)
Map Location	89,278,571 - 89,406,866
singlet/doublet	doublet
Overlap gene	4932411E22Rik, Ankfn1
Upstream gene	Msi2, LOC100038945, Akap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525, LOC100039114, Nog, LOC100039047
Downstream gene	Pctp, Tmem100, LOC100039104, Mmd, Hlf, Stxbp4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Msi2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76626 MGI:1923876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038945 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038945
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 2 Proteins

name	Akap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11640 MGI:104729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Scpep1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74617 MGI:1921867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	OTTMUSG00000001305 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217066 MGI:3651308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	2210409E12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72381 MGI:1919631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Coil (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12812 MGI:104842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039051 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039051
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Trim25 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217069 MGI:102749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dgke (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56077 MGI:1889276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930013B10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414094 MGI:3041185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	Gm525 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217071 MGI:2685371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039114 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039114
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Nog (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18121 MGI:104327
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039047 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	4932411E22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214604 MGI:3045332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankfn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382543 MGI:2686021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pctp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18559 MGI:107375
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem100 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67888 MGI:1915138
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039104 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Mmd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67468 MGI:1914718
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hlf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217082 MGI:96108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stxbp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20913 MGI:1342296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Msi2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286824 GeneID:76626 MGI:1923876
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Musashi homolog 2 (Drosophila) transcript_id : NM_054043.3

name	LOC100038945 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262367 GeneID:100038945
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 2 Proteins product : similar to Musashi homolog 2 (Drosophila) transcript_id : XM_001471946.1

name	Akap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347476 GeneID:11640 MGI:104729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 1 transcript_id : NM_001042541.1

name	Akap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347488 GeneID:11640 MGI:104729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 1 transcript_id : NM_009648.2

name	Scpep1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982616 GeneID:74617 MGI:1921867
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine carboxypeptidase 1 transcript_id : NM_029023.2

name	Coil (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053928 GeneID:12812 MGI:104842
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coilin transcript_id : NM_016706.2

name	LOC100039051 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262372 GeneID:100039051
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039051 transcript_id : XM_001472257.1

name	Trim25 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849790 GeneID:217069 MGI:102749
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif protein 25 transcript_id : NM_009546.1

name	Dgke (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126432551 GeneID:56077 MGI:1889276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diacylglycerol kinase, epsilon transcript_id : NM_019505.3

name	Gm525 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126366077 GeneID:217071 MGI:2685371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 525, (NCBI) transcript_id : NM_001033266.2

name	LOC100039114 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262374 GeneID:100039114
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039114 transcript_id : XM_001472509.1

name	Nog (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7110674 GeneID:18121 MGI:104327
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : noggin transcript_id : NM_008711.1

name	LOC100039047 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262370 GeneID:100039047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : hypothetical protein LOC100039047 transcript_id : XM_001472161.1

name	4932411E22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803578 GeneID:214604 MGI:3045332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932411E22 gene transcript_id : NM_172534.2

name	Ankfn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286855 GeneID:382543 MGI:2686021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin-repeat and fibronectin type III domain containing 1 transcript_id : NM_001080933.1

name	Pctp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117320551 GeneID:18559 MGI:107375
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylcholine transfer protein transcript_id : NM_008796.2

name	Tmem100 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353421 GeneID:67888 MGI:1915138
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 100 transcript_id : NM_026433.2

name	Mmd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982654 GeneID:67468 MGI:1914718
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : monocyte to macrophage differentiation-associated transcript_id : NM_026178.2

name	Hlf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487342 GeneID:217082 MGI:96108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hepatic leukemia factor transcript_id : NM_172563.3

name	Stxbp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755691 GeneID:20913 MGI:1342296
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syntaxin binding protein 4 transcript_id : NM_011505.1

name	Msi2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17157989 GeneID:76626 MGI:1923876
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005844 - polysome [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008266 - poly(U) binding [Evidence IDA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003727 - single-stranded RNA binding [Evidence IDA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : unclassified translation discrepancy note : Musashi2 product : Musashi homolog 2 protein_id : NP_473384.1

name	LOC100038945 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262368 GeneID:100038945
definition	codon_start : 1 product : similar to Musashi homolog 2 (Drosophila) protein_id : XP_001471996.1

name	Akap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347477 GeneID:11640 MGI:104729
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : A kinase anchor protein product : A-kinase anchor protein 1 protein_id : NP_001036006.1

name	Akap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347489 CCDS:CCDS25229.1 GeneID:11640 MGI:104729
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : A kinase anchor protein product : A-kinase anchor protein 1 protein_id : NP_033778.2

name	Scpep1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982617 CCDS:CCDS25230.1 GeneID:74617 MGI:1921867
definition	GO_function : GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : retinoid-inducible serine caroboxypetidase; retinoid-inducible serine caroboxypeptidase; serine caroboxypeptidase 1 product : serine carboxypeptidase 1 protein_id : NP_083299.2

name	Coil (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053929 GeneID:12812 MGI:104842
definition	GO_component : GO:0015030 - Cajal body [Evidence IDA]; GO:0001674 - female germ cell nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : nuclear phosphoprotein of Cajal body; p80 Coilin product : coilin protein_id : NP_057915.2

name	LOC100039051 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262373 GeneID:100039051
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472307.1

name	Trim25 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849791 GeneID:217069 MGI:102749
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : estrogen-responsive finger protein; zinc finger protein 147 product : tripartite motif protein 25 protein_id : NP_033572.1

name	Dgke (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506541 CCDS:CCDS25234.1 GeneID:56077 MGI:1889276
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0004143 - diacylglycerol kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007205 - protein kinase C activation [Evidence IEA] codon_start : 1 product : diacylglycerol kinase, epsilon protein_id : NP_062378.1

name	Gm525 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701760 GeneID:217071 MGI:2685371
definition	codon_start : 1 note : novel transcript product : hypothetical protein LOC217071 protein_id : NP_001028438.1

name	LOC100039114 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262375 GeneID:100039114
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472559.1

name	Nog (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7110675 CCDS:CCDS25236.1 GeneID:18121 MGI:104327
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_process : GO:0030509 - BMP signaling pathway [Evidence IDA]; GO:0007420 - brain development [Evidence IMP]; GO:0051216 - cartilage development [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0045596 - negative regulation of cell differentiation [Evidence IEA]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001501 - skeletal development [Evidence IMP]; GO:0001657 - ureteric bud development [Evidence IDA] codon_start : 1 product : noggin protein_id : NP_032737.1

name	LOC100039047 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262371 GeneID:100039047
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472211.1

name	4932411E22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369752 CCDS:CCDS25237.1 GeneID:214604 MGI:3045332
definition	codon_start : 1 product : hypothetical protein LOC214604 protein_id : NP_766122.1

name	Ankfn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286856 GeneID:382543 MGI:2686021
definition	codon_start : 1 product : ankyrin-repeat and fibronectin type III domain containing 1 protein_id : NP_001074402.1

name	Pctp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117320552 CCDS:CCDS25238.1 GeneID:18559 MGI:107375
definition	GO_function : GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0008203 - cholesterol metabolism [Evidence IMP]; GO:0006869 - lipid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : phosphatidylcholine transfer protein protein_id : NP_032822.2

name	Tmem100 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385928 CCDS:CCDS25239.1 GeneID:67888 MGI:1915138
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC67888 protein_id : NP_080709.1

name	Mmd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385688 CCDS:CCDS25240.1 GeneID:67468 MGI:1914718
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0019835 - cytolysis [Evidence IEA] codon_start : 1 product : monocyte to macrophage differentiation-associated protein_id : NP_080454.1

name	Hlf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982951 CCDS:CCDS25241.1 GeneID:217082 MGI:96108
definition	GO_function : GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0048511 - rhythmic process [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : hepatic leukemia factor protein_id : NP_766151.1

name	Stxbp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755692 CCDS:CCDS25242.1 GeneID:20913 MGI:1342296
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0015758 - glucose transport [Evidence IDA]; GO:0008286 - insulin receptor signaling pathway [Evidence IDA]; GO:0006605 - protein targeting [Evidence IDA] codon_start : 1 product : syntaxin binding protein 4 protein_id : NP_035635.1

name	LOC100039104 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039104
definition	number : 1 pseudo : _no_value

name	LOC100039104 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039104
definition	number : 2 pseudo : _no_value

name	LOC100039104 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039104
definition	number : 3 pseudo : _no_value

name	LOC100039104 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039104
definition	number : 4 pseudo : _no_value

name	OTTMUSG00000001305 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262364 GeneID:217066 MGI:3651308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000001305 pseudo : _no_value transcript_id : XR_035754.1

name	2210409E12Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:134053860 GeneID:72381 MGI:1919631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2210409E12 gene pseudo : _no_value transcript_id : NR_003492.1

name	A930013B10Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262369 GeneID:414094 MGI:3041185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : RIKEN cDNA A930013B10 gene transcript_id : XR_035174.1

clone name	MSMg01-402L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339I04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-307D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121J15
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-235K08.b	B6Ng01-235K08.g
ACC	GA047069	GA047070
length	1,110	692
definition	B6Ng01-235K08.b	B6Ng01-235K08.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(89,278,571 - 89,279,678)	(89,406,179 - 89,406,866)
sequence	gaattcccttgttattaaagtttttcctagttctgactgaatttctcaaa acattcttttctttctcagacatgctcagggtatctttaccacttatgga aggagctagagcacaaggccctcgttaaaaacgttttccttagcatcttc ttcagagggggctggtccattatagcaaaggcttaagagattctatggaa gttgtcattaatttcttagtgggctgatgcccagtggaggagaagagaaa gttctggtcatttaaggataaggtggggtttgccgtgatccttactaaaa gcctgcaatattttaaaacttgtttctgacacaaggaactttgatctgga cagtgtatcagtttctatgcactggcaacactgctctgtggtccttaaaa aaaaaaaaaaaaaaacaaagacactgatggaattggatgtgccaatgaaa caaagcccaaccacgtggccttttccggaaattacatgatgctcattagt cagttagataacccatgatgtagccagaagggagggacaacggagaatca gtttgtctttcggggggaaaaaaaggcagccttaaaatgaggaactgtga gacacaggctttgatctatggtctatttttcatagattaaggctagtgtg tatggtcttacagttgcttttaacaacaaaagtaggtaagacagatcaaa gtggaagacacagttggatacgactatattactctgctggtcatatttct aagtctatatttatgttatttatccctgggtcctaggaagaaccacttaa actatggcccatggatttgtggcgtcgtgatttccccgagagcttattag aaaagtgtatttttccagctctctctcagcctcctgacccagcatcgatg ggtctgggcttccagaaagctatgttttaacaagctctccaaggtgattt cttatgaacagtaaactttcgaggaacattattctagggcattggtagcc taagtatgtgttttgtggatattttttttaaatagatgccatgccaaaaa tgtttcagtctgtcagatgattcagaaaattctggttagaacaaagtcag ctttctttct	gaattctaacgacgacggagagggtggcaggcagaacaagaagacttttc aggagttcagggactctgattatcacgtcgtcgtaggagctgcagcgagc tgggaggctgccggagaggcgcgcacagagccgttcttggaaagctgtca gggaagggtttgtaacctccctaagagaatcgcgcttcttaaaatcccca gtctggaaaaacctcccgtgaccggtccggatcaacgctgtgtggtagct gcagcaaaaagaacggggaaccacctctgcctgaatctttctgaatgtcg agtgtctgggctcctcaagactgggggcaaactccacaagcgggttcccc gcgtgttaggaaggcattacttttttttctgaaaggtcatctggggctta aaacaaaatcatcgagaaagagcatgcccatgaacagtctgcacgatttg aaaaggcctatctgaaaccgaaatagcagcaccctccctacagcccttct ctctctttgggggattagtagagggggcagggggaggggaagaggcagag catggcattcattactgacaacttcacacataataagcatgttcgaatcc accctgaggagttctctttttttattttatttttaatcccccctcccctt tagctgtttttgataagtgggtacattttatttggggggggg
quality values	Open. Hide. 38 47 34 38 62 62 62 62 62 62 62 62 47 56 47 54 62 62 47 47 54 62 62 62 62 62 62 62 59 62 62 45 50 24 24 33 40 50 49 37 48 59 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 59 62 62 54 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 42 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 54 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 51 51 50 51 45 51 50 34 33 56 34 59 59 59 43 59 59 59 62 59 59 59 56 46 56 56 59 56 59 59 59 50 44 56 59 59 59 62 62 62 59 62 50 59 62 59 59 56 59 59 56 56 51 56 56 56 56 56 56 56 62 62 51 51 51 56 56 56 56 56 56 56 56 56 56 62 62 51 56 50 50 40 39 56 56 62 51 56 62 47 56 51 51 51 31 43 56 56 62 62 62 56 56 56 54 47 56 56 56 56 39 56 62 56 56 62 56 56 62 56 62 56 62 62 54 47 62 62 62 56 47 36 23 38 43 42 49 62 43 54 62 62 62 49 54 62 62 62 62 62 62 54 52 62 52 62 54 62 62 54 54 54 54 58 52 52 52 54 54 54 47 58 52 47 52 48 52 52 40 44 52 44 40 46 52 27 33 52 25 36 40 50 54 52 43 54 52 54 46 42 37 52 40 54 47 52 54 54 48 47 54 52 46 54 52 54 52 39 52 41 42 43 23 54 58 38 51 51 52 49 47 51 48 48 40 58 40 54 41 47 45 58 58 47 42 49 50 40 49 39 37 47 37 47 50 49 50 41 41 34 28 48 40 50 32 12 54 58 50 39 53 53 49 49 37 37 54 39 54 46 52 40 32 50 53 51 54 49 37 43 48 34 58 49 31 58 27 32 53 32 49 58 30 47 53 52 37 24 28 10 41 30 28 31 35 37 53 39 39 39 50 51 30 37 39 35 58 51 32 50 40 40 37 49 51 54 38 21 53 41 35 34 42 37 49 37 52 39 54 28 49 52 25 6 10 31 32 29 28 40 35 27 51 20 8 20 54 54 38 53 47 14 32 19 35 46 34 24 54 16 10 25 26 40 28 12 9 44 41 38 32 34 44 49 52 20 51 36 27 31 32 33 22 40 32 33 31 28 29 31 30 27 37 53 26 28 42 15 14 53 18 53 34 41 31 24 45 9 6 9 9 9 38 32 45 18 21 18 38 46 46 17 12 20 40 24 25 28 51 51 51 24 11 17 30 28 30 20 25 36 34 30 21 30 31 21 14 31 23 25 29 13 15 24 31 17 40 16 9 17 32 25 9 9 14 32 29 31 48 32 22 29 25 48 46 6 10 21 8 16 30 17 14 41 42 31 27 31 31 12 25 32 32 35 30 9 7 6 27 7 24 25 30 31 32 18 10 39 10 18 37 19 7 16 28 16 21 6 10 25 22 17 11 12 33 8 11 10 11 9 13 44 36 20 22 42 16 11 9 21 18 30 38 13 10 10 29 30 31 33 22 32 20 14 16 33 19 18 21 21 26 10 16 7 18 20 29 20 4 13 9 4 11 8 8 16 9 24 12 43 31 24 14 5 17 15 10 9 9 18 33 21 31 33 31 37 7 30 36 12 8 15 18 34 22 21 10 34 16 11 33 19 27 21 40 21 29 17 6 3 3 15 7 22 6 5 7 3 3 5 4 6 8 7 14 13 7 12 22 28 7 5 15 28 40 10 7 11 10 5 7 9 15 3 9 6 6 8 11 7 20 28 14 17 27 9 21 13 23 14 28 23 9 8 25 8 7 11	Open. Hide. 62 47 51 47 62 62 62 51 62 62 18 34 30 12 21 27 28 49 26 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 59 59 62 62 62 49 54 59 62 62 59 40 59 56 59 59 62 62 59 59 59 62 62 62 59 59 62 59 59 62 62 59 62 59 62 62 62 59 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 54 59 59 62 62 62 62 62 62 62 62 54 59 59 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 47 54 62 62 49 62 62 56 47 32 44 50 22 19 46 24 42 26 31 39 18 14 20 33 29 20 14 34 34 24 20 24 32 42 24 21 38 30 51 42 39 21 31 42 51 38 23 14 24 14 22 22 39 33 56 47 62 31 23 22 15 42 30 30 37 39 27 26 28 28 18 30 27 9 24 33 25 16 17 24 17 27 23 27 26 31 30 38 38 31 56 15 14 30 32 22 30 27 15 25 11 10 13 13 23 15 47 43 26 30 9 35 41 34 38 35 34 28 10 12 16 21 10 19 27 38 35 22 32 22 12 17 18 24 18 18 21 18 13 10 11 23 35 21 9 33 15 47 52 22 9 17 17 17 25 24 27 32

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_89278571_89279678
seq2: B6Ng01-235K08.b_47_1156

seq1  GAATTCCCTTGTTATTAAAGTTTTTCCTAGTTCTGACTGAATTTCTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTGTTATTAAAGTTTTTCCTAGTTCTGACTGAATTTCTCAAA  50

seq1  ACATTCTTTTCTTTCTCAGACATGCTCAGGGTATCTTTACCACTTATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTTTTCTTTCTCAGACATGCTCAGGGTATCTTTACCACTTATGGA  100

seq1  AGGAGCTAGAGCACAAGGCCCTCGTTAAAAACGTTTTCCTTAGCATCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTAGAGCACAAGGCCCTCGTTAAAAACGTTTTCCTTAGCATCTTC  150

seq1  TTCAGAGGGGGCTGGTCCATTATAGCAAAGGCTTAAGAGATTCTATGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGGGGGCTGGTCCATTATAGCAAAGGCTTAAGAGATTCTATGGAA  200

seq1  GTTGTCATTAATTTCTTAGTGGGCTGATGCCCAGTGGAGGAGAAGAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCATTAATTTCTTAGTGGGCTGATGCCCAGTGGAGGAGAAGAGAAA  250

seq1  GTTCTGGTCATTTAAGGATAAGGTGGGGTTTGCCGTGATCCTTACTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGTCATTTAAGGATAAGGTGGGGTTTGCCGTGATCCTTACTAAAA  300

seq1  GCCTGCAATATTTTAAAACTTGTTTCTGACACAAGGAACTTTGATCTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAATATTTTAAAACTTGTTTCTGACACAAGGAACTTTGATCTGGA  350

seq1  CAGTGTATCAGTTTCTATGCACTGGCAACACTGCTCTGTGGTCCTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTATCAGTTTCTATGCACTGGCAACACTGCTCTGTGGTCCTTAAAA  400

seq1  AAAAAAAAAAAAAAACAAAGACACTGATGGAATTGGATGTGCCAATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAACAAAGACACTGATGGAATTGGATGTGCCAATGAAA  450

seq1  CAAAGCCCAACCACGTGGCCTTTTCCGGAAATTACATGATGCTCATTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCCAACCACGTGGCCTTTTCCGGAAATTACATGATGCTCATTAGT  500

seq1  CAGTTAGATAACCCATGATGTAGCCAGAAGGGAGGGACAACGGAGAATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGATAACCCATGATGTAGCCAGAAGGGAGGGACAACGGAGAATCA  550

seq1  GTTTGTCTTTCGGGGGGAAAAAAAGGCAGCCTTAAAATGAGGAACTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCTTTCGGGGGGAAAAAAAGGCAGCCTTAAAATGAGGAACTGTGA  600

seq1  GACACAGGCTTTGATCTATGGTCTATTTTTCATAGATTAAGGCTAGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGGCTTTGATCTATGGTCTATTTTTCATAGATTAAGGCTAGTGTG  650

seq1  TATGGTCTTACAGTTGCTTTTAACAACAAAAGTAGGTAAGACAGATCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCTTACAGTTGCTTTTAACAACAAAAGTAGGTAAGACAGATCAAA  700

seq1  GTGGAAGACACAGTTGGATACGACTATATTACTCTGCTGGTCATATTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGACACAGTTGGATACGACTATATTACTCTGCTGGTCATATTTCT  750

seq1  AAGTCTATATTTATG-TATTTATCCCTGGGTCCTAGGAAGAACCACTTAA  799
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGTCTATATTTATGTTATTTATCCCTGGGTCCTAGGAAGAACCACTTAA  800

seq1  ACTATGGCCCATGGATTTGTGGCGTCGTGA-TTCCCCGAGAGCTTATTAG  848
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACTATGGCCCATGGATTTGTGGCGTCGTGATTTCCCCGAGAGCTTATTAG  850

seq1  AAAAGTGTA-TTTTCCAGCTCTCTCTCAGCCTCCTGACCCAGCATCGATG  897
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGTATTTTTCCAGCTCTCTCTCAGCCTCCTGACCCAGCATCGATG  900

seq1  GGTCTGGGC-TCCAGAAAGCTATGTTTTAACAAGCTCTCC-AGGTGA-TT  944
      ||||||||| |||||||||||||||||||||||||||||| |||||| ||
seq2  GGTCTGGGCTTCCAGAAAGCTATGTTTTAACAAGCTCTCCAAGGTGATTT  950

seq1  CTTATGAACAGTAAAC-TTCGAGGAACATTATTCTAGGGCATT-GTAGCC  992
      |||||||||||||||| |||||||||||||||||||||||||| |||| |
seq2  CTTATGAACAGTAAACTTTCGAGGAACATTATTCTAGGGCATTGGTAG-C  999

seq1  CTAAGTATGTGTTTTGTGGATATTTTTTTTAAATAGATGCCATGCCAAAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTATGTGTTTTGTGGATATTTTTTTTAAATAGATGCCATGCCAAAA  1049

seq1  ATGTTTCCAGTTCTGGTCAGATGATTTCAGAAAATTCTGGGTTAG-ACAA  1091
      |||||| ||| ||| ||||||||| ||||||||||||| |||||| ||||
seq2  ATGTTT-CAG-TCT-GTCAGATGA-TTCAGAAAATTCT-GGTTAGAACAA  1094

seq1  AGTCAAGCTTTCTTTCT  1108
      |||| ||||||||||||
seq2  AGTC-AGCTTTCTTTCT  1110

seq1: chr11_89406179_89406866
seq2: B6Ng01-235K08.g_64_755 (reverse)

seq1  CCCCCCCCCAAATAAAATGT-GCCACTTATCAAAAACAGCTAAAGGG--A  47
      ||||||||||||||||||||  |||||||||||||||||||||||||   
seq2  CCCCCCCCCAAATAAAATGTACCCACTTATCAAAAACAGCTAAAGGGGAG  50

seq1  GGGGGATTAAAAATAAAAT-AAAAAAGAGAACTCCTCAGGGTGGATTCGA  96
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGGGGATTAAAAATAAAATAAAAAAAGAGAACTCCTCAGGGTGGATTCGA  100

seq1  ACATGCTTATTATGTGTGAAGTTGTCAGTAATGAATGCCATGCTCTGCCT  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTTATTATGTGTGAAGTTGTCAGTAATGAATGCCATGCTCTGCCT  150

seq1  CTTCCCCTCCCCCTGCCCCCTCTACTAATCCCCCAAAGAGAGAGAAGGGC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTCCCCCTGCCCCCTCTACTAATCCCCCAAAGAGAGAGAAGGGC  200

seq1  TGTAGGGAGGGTGCTGCTATTTCGGTTTCAGATAGGCCTTTTCAAATCGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGAGGGTGCTGCTATTTCGGTTTCAGATAGGCCTTTTCAAATCGT  250

seq1  GCAGACTGTTCATGGGCATGCTCTTTCTCGATGATTTTGTTTTAAGCCCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTGTTCATGGGCATGCTCTTTCTCGATGATTTTGTTTTAAGCCCC  300

seq1  AGATGACCTTTCAGAAAAAAAAGTAATGCCTTCCTAACACGCGGGGAACC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACCTTTCAGAAAAAAAAGTAATGCCTTCCTAACACGCGGGGAACC  350

seq1  CGCTTGTGGAGTTTGCCCCCAGTCTTGAGGAGCCCAGACACTCGACATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTGTGGAGTTTGCCCCCAGTCTTGAGGAGCCCAGACACTCGACATTC  400

seq1  AGAAAGATTCAGGCAGAGGTGGTTCCCCGTTCTTTTTGCTGCAGCTACCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATTCAGGCAGAGGTGGTTCCCCGTTCTTTTTGCTGCAGCTACCA  450

seq1  CACAGCGTTGATCCGGACCGGTCACGGGAGGTTTTTCCAGACTGGGGATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCGTTGATCCGGACCGGTCACGGGAGGTTTTTCCAGACTGGGGATT  500

seq1  TTAAGAAGCGCGATTCTCTTAGGGAGGTTACAAACCCTTCCCTGACAGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAGCGCGATTCTCTTAGGGAGGTTACAAACCCTTCCCTGACAGCT  550

seq1  TTCCAAGAACGGCTCTGTGCGCGCCTCTCCGGCAGCCTCCCAGCTCGCTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGAACGGCTCTGTGCGCGCCTCTCCGGCAGCCTCCCAGCTCGCTG  600

seq1  CAGCTCCTACGACGACGTGATAATCAGAGTCCCTGAACTCCTGAAAAGTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTACGACGACGTGATAATCAGAGTCCCTGAACTCCTGAAAAGTC  650

seq1  TTCTTGTTCTGCCTGCCACCCTCTCCGTCGTCGTTAGAATTC  688
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTCTGCCTGCCACCCTCTCCGTCGTCGTTAGAATTC  692

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information