MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-235L05
Chromosome	11 (Build37)
Map Location	67,853,817 - 67,993,931
singlet/doublet	doublet
Overlap gene	Stx8
Upstream gene	2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13, Gas7, Rcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16
Downstream gene	Ntn1, Pik3r5, BB220380, BC024997, Ccdc42, Myh10, Ndel1, 9930039A11Rik, Rpl26, Odf4, Arhgef15, Slc25a35, 2400006H24Rik, Pfas, 1500010J02Rik, Aurkb, 2310047M10Rik, Tmem107, Vamp2, Per1, Hes7, Aloxe3, Alox12b
Link	Open Mouse BAC browser

Click to get alignment info.

name	2310004I24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66358 MGI:1913608
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sco1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52892 MGI:106362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myh3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17883 MGI:1339709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 38 ESTs, 52 Proteins

name	Myh2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17882 MGI:1339710
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17879 MGI:1339711
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myh4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17884 MGI:1339713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myh8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17885 MGI:1339712
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myh13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544791 MGI:1339967
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gas7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14457 MGI:1202388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rcvrn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19674 MGI:97883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glp2r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93896 MGI:2136733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC544792 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:544792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins

name	Dhrs7c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68460 MGI:1915710
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041899 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041899
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Usp43 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216835 MGI:2444541
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71860 MGI:1919110
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stx8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55943 MGI:1890156
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ntn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18208 MGI:105088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pik3r5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320207 MGI:2443588
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BB220380 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104709 MGI:2144613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	BC024997 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215723 MGI:2384904
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc42 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:276920 MGI:3045254
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myh10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77579 MGI:1930780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndel1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83431 MGI:1932915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9930039A11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320040 MGI:2443227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl26 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19941 MGI:106022
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Odf4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:252868 MGI:2182079
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arhgef15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:442801 MGI:3045246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a35 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71998 MGI:1919248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2400006H24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57785 MGI:1889073
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pfas (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237823 MGI:2684864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 81 ESTs, 7 Proteins

name	1500010J02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68964 MGI:1916214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Aurkb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20877 MGI:107168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310047M10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71923 MGI:1919173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem107 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66910 MGI:1914160
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Vamp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22318 MGI:1313277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Per1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18626 MGI:1098283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hes7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:84653 MGI:2135679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aloxe3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23801 MGI:1345140
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alox12b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11686 MGI:1274782
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310004I24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351814 GeneID:66358 MGI:1913608
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310004I24 gene transcript_id : NM_025510.2

name	Sco1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90991709 GeneID:52892 MGI:106362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SCO cytochrome oxidase deficient homolog 1 (yeast) transcript_id : NM_001040026.1

name	Myh3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261972 GeneID:17883 MGI:1339709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 38 ESTs, 52 Proteins product : myosin, heavy polypeptide 3, skeletal muscle, embryonic transcript_id : XM_354614.6

name	Myh2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88196775 GeneID:17882 MGI:1339710
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin, heavy polypeptide 2, skeletal muscle, adult transcript_id : NM_001039545.1

name	Myh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82524273 GeneID:17879 MGI:1339711
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin, heavy polypeptide 1, skeletal muscle, adult transcript_id : NM_030679.1

name	Myh4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67189166 GeneID:17884 MGI:1339713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin, heavy polypeptide 4, skeletal muscle transcript_id : NM_010855.2

name	Myh8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71143151 GeneID:17885 MGI:1339712
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin, heavy polypeptide 8, skeletal muscle, perinatal transcript_id : NM_177369.3

name	Myh13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486958 GeneID:544791 MGI:1339967
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin, heavy polypeptide 13, skeletal muscle transcript_id : NM_001081250.1

name	Gas7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142389036 GeneID:14457 MGI:1202388
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth arrest specific 7 transcript_id : NM_008088.2

name	Rcvrn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677692 GeneID:19674 MGI:97883
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : recoverin transcript_id : NM_009038.1

name	Glp2r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30023839 GeneID:93896 MGI:2136733
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucagon-like peptide 2 receptor transcript_id : NM_175681.2

name	LOC544792 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261928 GeneID:544792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : similar to hCG1653800 transcript_id : XM_618894.4

name	Dhrs7c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67625740 GeneID:68460 MGI:1915710
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dehydrogenase/reductase (SDR family) member 7C transcript_id : NM_001013013.1

name	Usp43 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123314451 GeneID:216835 MGI:2444541
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 43 transcript_id : NM_173754.4

name	Wdr16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053951 GeneID:71860 MGI:1919110
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 16 transcript_id : NM_027963.2

name	Stx8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56118241 GeneID:55943 MGI:1890156
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syntaxin 8 transcript_id : NM_018768.2

name	Ntn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112363093 GeneID:18208 MGI:105088
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : netrin 1 transcript_id : NM_008744.2

name	Pik3r5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86262160 GeneID:320207 MGI:2443588
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoinositide-3-kinase, regulatory subunit 5, p101 transcript_id : NM_177320.2

name	BB220380 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126362958 GeneID:104709 MGI:2144613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence BB220380 transcript_id : NM_001081566.1

name	BB220380 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126362962 GeneID:104709 MGI:2144613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence BB220380 transcript_id : NM_001004435.2

name	BC024997 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122466 GeneID:215723 MGI:2384904
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC024997 transcript_id : NM_146004.1

name	Ccdc42 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343047 GeneID:276920 MGI:3045254
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 42 transcript_id : NM_177779.2

name	Myh10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:105554494 GeneID:77579 MGI:1930780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin, heavy polypeptide 10, non-muscle transcript_id : NM_175260.2

name	Ndel1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963776 GeneID:83431 MGI:1932915
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear distribution gene E-like homolog 1 (A. nidulans) transcript_id : NM_023668.1

name	9930039A11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089299 GeneID:320040 MGI:2443227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9930039A11 gene transcript_id : NM_177060.3

name	Rpl26 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:130500915 GeneID:19941 MGI:106022
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L26 transcript_id : NM_009080.2

name	Odf4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21919407 GeneID:252868 MGI:2182079
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : outer dense fiber of sperm tails 4 transcript_id : NM_145746.1

name	Arhgef15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60279699 GeneID:442801 MGI:3045246
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho guanine nucleotide exchange factor (GEF) 15 transcript_id : NM_177566.3

name	Slc25a35 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354306 GeneID:71998 MGI:1919248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25, member 35 transcript_id : NM_028048.2

name	2400006H24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56961625 GeneID:57785 MGI:1889073
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2400006H24 gene transcript_id : NM_021329.2

name	Pfas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261973 GeneID:237823 MGI:2684864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 81 ESTs, 7 Proteins product : phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) transcript_id : XM_111232.8

name	1500010J02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61742799 GeneID:68964 MGI:1916214
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1500010J02 gene transcript_id : NM_026889.2

name	1500010J02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61742801 GeneID:68964 MGI:1916214
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1500010J02 gene transcript_id : NM_001013256.1

name	Aurkb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51317393 GeneID:20877 MGI:107168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aurora kinase B transcript_id : NM_011496.1

name	2310047M10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369094 GeneID:71923 MGI:1919173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310047M10 gene transcript_id : NM_028005.3

name	Tmem107 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802127 GeneID:66910 MGI:1914160
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 107 transcript_id : NM_028336.2

name	Tmem107 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21539608 GeneID:66910 MGI:1914160
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 107 transcript_id : NM_025838.1

name	Vamp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130363 GeneID:22318 MGI:1313277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vesicle-associated membrane protein 2 transcript_id : NM_009497.3

name	Per1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803296 GeneID:18626 MGI:1098283
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : period homolog 1 (Drosophila) transcript_id : NM_011065.3

name	Hes7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368444 GeneID:84653 MGI:2135679
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hairy and enhancer of split 7 (Drosophila) transcript_id : NM_033041.3

name	Aloxe3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753041 GeneID:23801 MGI:1345140
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arachidonate lipoxygenase 3 transcript_id : NM_011786.1

name	Alox12b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130321 GeneID:11686 MGI:1274782
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arachidonate 12-lipoxygenase, 12R type transcript_id : NM_009659.2

name	2310004I24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384932 GeneID:66358 MGI:1913608
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66358 protein_id : NP_079786.1

name	Sco1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90991710 GeneID:52892 MGI:106362
definition	GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : SCO cytochrome oxidase deficient homolog 1 protein_id : NP_001035115.1

name	Myh3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82934745 GeneID:17883 MGI:1339709
definition	codon_start : 1 product : muscle embryonic myosin heavy chain 3 protein_id : XP_354614.4

name	Myh2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88196776 CCDS:CCDS24854.1 GeneID:17882 MGI:1339710
definition	GO_component : GO:0005826 - contractile ring [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IMP] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA]; GO:0001778 - plasma membrane repair [Evidence IMP] codon_start : 1 note : myosin heavy chain 2A; skeletal muscle myosin heavy chain II-a product : myosin, heavy polypeptide 2, skeletal muscle, adult protein_id : NP_001034634.1

name	Myh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82524274 CCDS:CCDS24855.1 GeneID:17879 MGI:1339711
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003774 - motor activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : myosin heavy chain 2X product : myosin, heavy polypeptide 1, skeletal muscle, adult protein_id : NP_109604.1

name	Myh4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67189167 CCDS:CCDS24856.1 GeneID:17884 MGI:1339713
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 product : myosin, heavy polypeptide 4, skeletal muscle protein_id : NP_034985.2

name	Myh8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71143152 CCDS:CCDS24857.1 GeneID:17885 MGI:1339712
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016459 - myosin [Evidence IEA]; GO:0005863 - striated muscle thick filament [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA]; GO:0006941 - striated muscle contraction [Evidence IEA] codon_start : 1 product : myosin, heavy polypeptide 8, skeletal muscle, perinatal protein_id : NP_796343.2

name	Myh13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486959 GeneID:544791 MGI:1339967
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : EO Myosin; extraocular myosin product : myosin, heavy polypeptide 13, skeletal muscle protein_id : NP_001074719.1

name	Gas7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679945 GeneID:14457 MGI:1202388
definition	GO_component : GO:0005884 - actin filament [Evidence IDA]; GO:0001726 - ruffle [Evidence IDA] GO_function : GO:0051015 - actin filament binding [Evidence IDA] GO_process : GO:0051017 - actin filament bundle formation [Evidence IDA]; GO:0030041 - actin filament polymerization [Evidence IDA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IDA] codon_start : 1 exception : unclassified translation discrepancy product : growth arrest specific 7 protein_id : NP_032114.1

name	Rcvrn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677693 CCDS:CCDS24859.1 GeneID:19674 MGI:97883
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IMP] GO_process : GO:0007602 - phototransduction [Evidence IMP]; GO:0051924 - regulation of calcium ion transport [Evidence IMP]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007601 - visual perception [Evidence IMP] codon_start : 1 note : guanylate cyclase activator; cancer associated retinopathy protein product : recoverin protein_id : NP_033064.1

name	Glp2r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30023840 CCDS:CCDS24860.1 GeneID:93896 MGI:2136733
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : G protein-coupled receptor GLP2R product : glucagon-like peptide 2 receptor protein_id : NP_783612.2

name	LOC544792 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261929 GeneID:544792
definition	codon_start : 1 product : similar to hCG1653800 protein_id : XP_618894.4

name	Dhrs7c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67625741 GeneID:68460 MGI:1915710
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : dehydrogenase/reductase (SDR family) member 7C protein_id : NP_001013031.1

name	Usp43 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123314452 CCDS:CCDS24861.1 GeneID:216835 MGI:2444541
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin specific protease 43 protein_id : NP_776115.2

name	Wdr16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053952 CCDS:CCDS24862.1 GeneID:71860 MGI:1919110
definition	codon_start : 1 note : WD40-repear protein upregulated in HCC product : WD40-repeat protein upregulated in HCC protein_id : NP_082239.2

name	Stx8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055356 CCDS:CCDS24863.1 GeneID:55943 MGI:1890156
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008565 - protein transporter activity [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 note : syntaxin-like protein 3I35 product : syntaxin 8 protein_id : NP_061238.1

name	Ntn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112363094 CCDS:CCDS24864.1 GeneID:18208 MGI:105088
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007411 - axon guidance [Evidence IMP] [Evidence IDA]; GO:0007409 - axonogenesis [Evidence IDA]; GO:0040023 - establishment of nucleus localization [Evidence IDA]; GO:0030517 - negative regulation of axon extension [Evidence IDA]; GO:0001764 - neuron migration [Evidence IMP]; GO:0045773 - positive regulation of axon extension [Evidence IDA]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0030334 - regulation of cell migration [Evidence IMP] [Evidence IDA] codon_start : 1 product : netrin 1 protein_id : NP_032770.2

name	Pik3r5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86262161 CCDS:CCDS24865.1 GeneID:320207 MGI:2443588
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : phosphoinositide-3-kinase, regulatory subunit 5, p101 protein_id : NP_796294.2

name	BB220380 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126362959 GeneID:104709 MGI:2144613
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1; p87 phosphoinositide 3-kinase gamma (PI3Kg) adapter protein; phosphoinositide 3-kinase regulatory subunit 6 product : p87 phosphoinositide 3-kinase gamma adapter protein isoform 1 protein_id : NP_001075035.1

name	BB220380 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138727 CCDS:CCDS24866.1 GeneID:104709 MGI:2144613
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2; p87 phosphoinositide 3-kinase gamma (PI3Kg) adapter protein; phosphoinositide 3-kinase regulatory subunit 6 product : p87 phosphoinositide 3-kinase gamma adapter protein isoform 2 protein_id : NP_001004435.1

name	BC024997 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122467 CCDS:CCDS24867.1 GeneID:215723 MGI:2384904
definition	codon_start : 1 product : hypothetical protein LOC215723 protein_id : NP_666116.1

name	Ccdc42 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244294 CCDS:CCDS24868.1 GeneID:276920 MGI:3045254
definition	codon_start : 1 product : coiled-coil domain containing 42 protein_id : NP_808447.1

name	Myh10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33598964 CCDS:CCDS24869.1 GeneID:77579 MGI:1930780
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0001725 - stress fiber [Evidence IMP] [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006887 - exocytosis [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0001778 - plasma membrane repair [Evidence IMP]; GO:0008360 - regulation of cell shape [Evidence IEA]; GO:0006930 - substrate-bound cell migration, cell extension [Evidence IMP] codon_start : 1 note : myosin IIB; myosin heavy chain, nonmuscular, type B; nonmuscle myosin heavy chain II-B product : myosin heavy chain 10, non-muscle protein_id : NP_780469.1

name	Ndel1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963777 CCDS:CCDS24870.1 GeneID:83431 MGI:1932915
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005813 - centrosome [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence IDA] GO_function : GO:0008017 - microtubule binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0001833 - inner cell mass cell proliferation [Evidence IMP]; GO:0000226 - microtubule cytoskeleton organization and biogenesis [Evidence IGI]; GO:0007399 - nervous system development [Evidence IEA]; GO:0001764 - neuron migration [Evidence IGI]; GO:0008090 - retrograde axon cargo transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA]; GO:0047496 - vesicle transport along microtubule [Evidence IGI] codon_start : 1 exception : mismatches in translation note : nuclear disribution gene E like; nuclear distribution gene E-like product : NudeL protein protein_id : NP_076157.1

name	9930039A11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089300 CCDS:CCDS24871.1 GeneID:320040 MGI:2443227
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC320040 protein_id : NP_796034.2

name	Rpl26 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677777 GeneID:19941 MGI:106022
definition	GO_component : GO:0005830 - cytosolic ribosome (sensu Eukaryota) [Evidence IEA]; GO:0015934 - large ribosomal subunit [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 product : ribosomal protein L26 protein_id : NP_033106.1

name	Odf4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21919408 CCDS:CCDS24872.1 GeneID:252868 MGI:2182079
definition	GO_component : GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA]; GO:0001520 - outer dense fiber [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : oppo 1; Oppo1-pending (oppo 1) product : outer dense fiber of sperm tails 4 protein_id : NP_665689.1

name	Arhgef15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60279700 CCDS:CCDS24873.1 GeneID:442801 MGI:3045246
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0006334 - nucleosome assembly [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 product : Rho guanine nucleotide exchange factor (GEF) 15 protein_id : NP_808234.2

name	Slc25a35 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312550 CCDS:CCDS24874.1 GeneID:71998 MGI:1919248
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] codon_start : 1 product : solute carrier family 25, member 35 protein_id : NP_082324.1

name	2400006H24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946640 CCDS:CCDS24875.1 GeneID:57785 MGI:1889073
definition	GO_component : GO:0005654 - nucleoplasm [Evidence IDA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IDA]; GO:0008536 - Ran GTPase binding [Evidence IDA] GO_process : GO:0006913 - nucleocytoplasmic transport [Evidence TAS] codon_start : 1 product : RAN guanine nucleotide release factor protein_id : NP_067304.1

name	Pfas (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63622229 GeneID:237823 MGI:2684864
definition	codon_start : 1 product : phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) protein_id : XP_111232.4

name	1500010J02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61742800 GeneID:68964 MGI:1916214
definition	codon_start : 1 note : isoform a is encoded by transcript variant 1 product : hypothetical protein LOC68964 isoform a protein_id : NP_081165.2

name	1500010J02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61742802 GeneID:68964 MGI:1916214
definition	codon_start : 1 note : isoform b is encoded by transcript variant 2 product : hypothetical protein LOC68964 isoform b protein_id : NP_001013274.1

name	Aurkb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51317394 CCDS:CCDS24877.1 GeneID:20877 MGI:107168
definition	EC_number : 2.7.11.1 GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : aurora-related kinase 2; serine/threonine kinase 5; serine/threonine kinase 12 product : aurora kinase B protein_id : NP_035626.1

name	2310047M10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120952555 GeneID:71923 MGI:1919173
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC71923 protein_id : NP_082281.2

name	Tmem107 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21539609 CCDS:CCDS24879.1 GeneID:66910 MGI:1914160
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC66910 isoform 1 protein_id : NP_080114.1

name	Tmem107 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21539635 CCDS:CCDS24880.1 GeneID:66910 MGI:1914160
definition	codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC66910 isoform 2 protein_id : NP_082612.1

name	Vamp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678551 CCDS:CCDS24881.1 GeneID:22318 MGI:1313277
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0030141 - secretory granule [Evidence IDA]; GO:0045202 - synapse [Evidence IEA]; GO:0008021 - synaptic vesicle [Evidence IDA]; GO:0030672 - synaptic vesicle membrane [Evidence IDA]; GO:0019717 - synaptosome [Evidence IEA]; GO:0042589 - zymogen granule membrane [Evidence IDA] GO_function : GO:0005516 - calmodulin binding [Evidence IDA]; GO:0005543 - phospholipid binding [Evidence IDA]; GO:0000149 - SNARE binding [Evidence IDA] GO_process : GO:0017156 - calcium ion-dependent exocytosis [Evidence IDA] [Evidence IMP]; GO:0006944 - membrane fusion [Evidence IMP]; GO:0017157 - regulation of exocytosis [Evidence IDA]; GO:0016079 - synaptic vesicle exocytosis [Evidence IMP]; GO:0016192 - vesicle-mediated transport [Evidence IEA] codon_start : 1 note : synaptobrevin II; vesicle-associated membrane 2 product : vesicle-associated membrane protein 2 protein_id : NP_033523.1

name	Per1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755032 CCDS:CCDS24882.1 GeneID:18626 MGI:1098283
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0007623 - circadian rhythm [Evidence TAS]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0048511 - rhythmic process [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : mismatches in translation product : period homolog 1 protein_id : NP_035195.1

name	Hes7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098129 CCDS:CCDS24883.1 GeneID:84653 MGI:2135679
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0007219 - Notch signaling pathway [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0048511 - rhythmic process [Evidence IMP] [Evidence IDA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0001756 - somitogenesis [Evidence IMP]; GO:0035121 - tail morphogenesis [Evidence IMP] codon_start : 1 note : bHLH factor Hes7 product : hairy and enhancer of split 7 protein_id : NP_149030.2

name	Aloxe3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753042 CCDS:CCDS24884.1 GeneID:23801 MGI:1345140
definition	GO_function : GO:0003824 - catalytic activity [Evidence ISS]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016165 - lipoxygenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0019370 - leukotriene biosynthesis [Evidence IEA]; GO:0006691 - leukotriene metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : arachidonate lipoxygenase 3 protein_id : NP_035916.1

name	Alox12b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753040 CCDS:CCDS24885.1 GeneID:11686 MGI:1274782
definition	GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016165 - lipoxygenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0019370 - leukotriene biosynthesis [Evidence IEA]; GO:0006691 - leukotriene metabolism [Evidence IEA] codon_start : 1 product : arachidonate 12-lipoxygenase, 12R type protein_id : NP_033789.1

name	LOC100041899 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041899
definition	number : 1 pseudo : _no_value

name	LOC100041899 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041899
definition	number : 2 pseudo : _no_value

name	LOC100041899 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041899
definition	number : 3 pseudo : _no_value

clone name	MSMg01-383E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323I11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-323H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210M14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-235L05.b	B6Ng01-235L05.g
ACC	GA047110	GA047111
length	1,141	1,128
definition	B6Ng01-235L05.b	B6Ng01-235L05.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(67,853,817 - 67,854,959)	(67,992,819 - 67,993,931)
sequence	gaattcttgtctctgtctcctgattgcaggcaggatgcttacactcaccc agcatttatatgggtgctagagatctcatctcaggtccatatgtttgcat ggcaaatgttttacccactgggccatctccccagcttcaagcattagaca gaattacttcatcaatacttattgtaaatgtgacaagacagtgccccccc cgtctctgtctctgtctctgtctctgtctctctctctctctctctctctc tctctctctctgttcttttgtaaaagggtctcatgtagttcaggctggcc tggaactcaattatgcagtcgtggatgaccttaaacttctaatcttcctg tctctgcctttcaaatgctaggataaaagttatgtactgctttctcttca atgtaataattctacttaagagacattggaaagcaaatataattgcatgt ttgtctacctttaccctataaaaggatgggagtaacagcaacacctagga actagtagggcttgctatggttaatatgaagggaacacataataaaagca caataggcagtactaaagtatcaaagcttttttttttttaaagtgtattc tatagcataggcacctcctttatcattcccaaggatgtactacaactatg aaatgaagatactgccatgggcttcatggaatggctgtccgtgtgtcctt cactaagctgtcggttgtcagtcagcttcatgtacagccttcccagcatc ccctggagatgctgaagcaggagtctgccttgtctgttttgttaagccat gcttgcaggaactacgctagagcagtggttttcaacctgtgcattcagac ctgtggggtggagggcggtgtcaaacaacccttttcataggggtagccta aggaccatggaaaacacagattgttatgttaacttatttcataacaggta gcaaaattacagttaggaaatagtaacaaaaatgcttttatggctgaagt caccacaacttggggaactgcataaaagtcacagcagtacggagtgagaa ctgttgctttaaagatgctggtggtcctgaaacggagtgttgctgcttcc ccttgttcctggggcttctgtctgcatcaactctgcaatgc	gaattctttctttaaaagcatataaagctattcttgaatttaaacagccc agacagatgaaaaatatgtgtttaaaaagccgggttgggcatcgaacccc ggacctgacccgtgcgaggctgaagcctgactgtttgcactcccagctgc tgagaagtactttgttgtgatttttcagacatggccccactatgtggcca tggctggcctggaagtcactgtctagtctcaaactcacagagatgatcca cctctgcatccctgagctgagatggcatgtgccatcacatccagctagaa aacgactctctgcaatagttgtcgaggagaaaataaatgaagaatcttct catcaaaagaataatggctggctccagacctacactttaacataccagaa tgaggaagctttgagagctggagaggtgcaggtaagcagggaaaaagaac atcaaactatttctcatttgactttgtaggacataaaaagtcagccttct cagcctcgccccaccccctttaattagcaactccgtctttcatggttatg ggttaggcttggtttccagcagtgggtttggccttagaatcttgcatttt ctaggttctgttcaccagcttcccaggcccctggcttagagcatcctctt cgttggtccaggatgcggcccaggaatttttagcaggaacaccatgtgct ttatcatcagggaaagttttagactacctggataataccgggtgttgact agttttatgtcaacttgatacaagcaagacttatctaaaggagaaaacct caattgagaaaatgtctccttaagatccagctgtagagtattttattaat tagtgattgatggggaaagggcccagcccattgtgggtgggacccatgcc tgggctggtggtcttggatcctataaataagcaggctgagcaaagccggt catgagcaagccagtaagcaggaccctccatgggcctccacatcaagttc ctgccttccaggttccctgctctgtttggagttcctgtccctgacttttc ttcaatgatggaccacaaggtggtagtagaaagcccgaaataaagcactt ttccccaaagtggcttcactgttagcaa
quality values	Open. Hide. 58 34 46 41 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 59 44 62 62 51 43 45 49 17 26 54 48 43 40 62 62 59 62 62 59 62 62 49 42 59 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 50 62 59 59 59 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 59 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 54 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 50 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 51 59 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 56 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 54 54 62 52 48 62 52 54 53 54 58 58 58 58 58 58 58 58 58 54 54 54 58 43 48 45 54 54 58 58 52 38 38 41 41 27 54 52 58 58 52 47 52 46 54 54 54 44 41 52 54 54 50 52 48 37 39 45 52 47 52 47 52 47 54 54 39 58 58 52 41 40 52 52 46 52 58 58 41 51 49 45 53 51 41 47 58 58 35 32 21 35 42 50 49 50 49 25 49 58 58 50 54 54 58 53 32 50 58 47 43 47 34 58 46 41 58 58 46 48 54 47 49 58 49 53 39 50 47 49 52 50 31 29 34 31 58 23 51 51 58 40 51 32 26 16 35 54 50 50 39 40 47 50 50 29 50 51 31 28 41 31 44 33 35 50 31 38 37 50 37 39 25 43 41 37 32 53 39 45 32 54 51 51 32 21 25 51 31 35 22 39 41 38 27 40 54 21 45 33 38 49 38 19 39 34 42 42 38 39 32 53 37 37 42 45 38 21 54 54 36 25 25 40 22 33 24 53 33 25 37 40 33 28 54 31 27 37 30 41 31 9 12 29 31 34 26 53 42 40 37 52 17 31 32 30 28 47 45 29 47 53 53 15 13 32 46 31 28 32 31 32 30 27 41 31 36 32 10 52 11 25 19 34 33 42 51 51 51 11 30 29 22 7 47 19 21 16 40 13 31 31 31 25 51 30 28 14 14 7 41 29 21 51 51 24 21 14 9 19 7 46 46 25 25 20 21 25 42 9 9 20 11 9 27 12 32 32 23 26 9 27 46 48 33 32 25 33 18 18 22 15 25 5 24 17 23 15 28 32 32 23 20 12 8 7 15 26 31 7 9 17 29 23 23 32 11 11 6 18 21 10 21 20 35 41 28 25 25 18 32 28 36 33 26 26 44 11 33 37 27 16 7 12 11 8 17 31 32 44 44 29 24 32 32 21 19 44 36 30 18 14 19 30 23 21 18 20 7 30 9 21 10 11 34 11 18 13 14 24 18 20 32 37 31 11 14 12 15 25 31 22 15 15 7 43 48 11 24 22 10 5 12 17 19 32 22 7 7 4 4 14 16 5 8 5 3 7 10 32 15 20 4 19 7 10 17 23 14 29 16 20 29 29 12 28 11 8 10 15 9 7 4 5 10 7 21 20 7 6 3 5 5 3 3 6 12 4 5 18 16 17 9 30 8 13 18 16 18 11 25 26 18 12 18 18 8 4 4 18 5 6 19 24 25 8 16 14 22 5 15 20 8 4 7 8 6 9 4 5 11 13 10 6 13 8 5 11 8 6 10 6	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr11_67853817_67854959
seq2: B6Ng01-235L05.b_46_1186

seq1  GAATTCTTGTCTCTGTCTCCTGATTGCAGGCAGGATGCTTACACTCACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCTCTGTCTCCTGATTGCAGGCAGGATGCTTACACTCACCC  50

seq1  AGCATTTATATGGGTGCTAGAGATCTCATCTCAGGTCCATATGTTTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTATATGGGTGCTAGAGATCTCATCTCAGGTCCATATGTTTGCAT  100

seq1  GGCAAATGTTTTACCCACTGGGCCATCTCCCCAGCTTCAAGCATTAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATGTTTTACCCACTGGGCCATCTCCCCAGCTTCAAGCATTAGACA  150

seq1  GAATTACTTCATCAATACTTATTGTAAATGTGACAAGACAGTGCCCCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACTTCATCAATACTTATTGTAAATGTGACAAGACAGTGCCCCCCC  200

seq1  CGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTC  250

seq1  TCTCTCTCTCTGTTCTTTTGTAAAAGGGTCTCATGTAGTTCAGGCTGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTGTTCTTTTGTAAAAGGGTCTCATGTAGTTCAGGCTGGCC  300

seq1  TGGAACTCAATTATGCAGTCGTGGATGACCTTAAACTTCTAATCTTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCAATTATGCAGTCGTGGATGACCTTAAACTTCTAATCTTCCTG  350

seq1  TCTCTGCCTTTCAAATGCTAGGATAAAAGTTATGTACTGCTTTCTCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCTTTCAAATGCTAGGATAAAAGTTATGTACTGCTTTCTCTTCA  400

seq1  ATGTAATAATTCTACTTAAGAGACATTGGAAAGCAAATATAATTGCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATAATTCTACTTAAGAGACATTGGAAAGCAAATATAATTGCATGT  450

seq1  TTGTCTACCTTTACCCTATAAAAGGATGGGAGTAACAGCAACACCTAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTACCTTTACCCTATAAAAGGATGGGAGTAACAGCAACACCTAGGA  500

seq1  ACTAGTAGGGCTTGCTATGGTTAATATGAAGGGAACACATAATAAAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTAGGGCTTGCTATGGTTAATATGAAGGGAACACATAATAAAAGCA  550

seq1  CAATAGGCAGTACTAAAGTATCAAAGCTTTTTTTTTTTTAAAGTGTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGGCAGTACTAAAGTATCAAAGCTTTTTTTTTTTTAAAGTGTATTC  600

seq1  TATAGCATAGGCACCTCCTTTATCATTCCCAAGGATGTACTACAACTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCATAGGCACCTCCTTTATCATTCCCAAGGATGTACTACAACTATG  650

seq1  AAATGAAGATACTGCCATGGGCTTCATGGAATGGCTGTCCGTGTGTCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGATACTGCCATGGGCTTCATGGAATGGCTGTCCGTGTGTCCTT  700

seq1  CACTAAGCTGTCGGTTGTCAGTCAGCTTCATGTACAGCCTTCCCAGCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGCTGTCGGTTGTCAGTCAGCTTCATGTACAGCCTTCCCAGCATC  750

seq1  CCCTGGAGATGCTGAAGCAGGAGTCTGCCTTGTCTGTTTTGTTAAGCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAGATGCTGAAGCAGGAGTCTGCCTTGTCTGTTTTGTTAAGCCAT  800

seq1  GCTTGCAGGAACTACGCTAGAGCAGTGGTTTTCAACCTGTGCATTCAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCAGGAACTACGCTAGAGCAGTGGTTTTCAACCTGTGCATTCAGAC  850

seq1  CTGTGGGGTGGAGGGCGGTGTCAAACAACCC-TTTCATAGGGGTAGCCTA  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTGTGGGGTGGAGGGCGGTGTCAAACAACCCTTTTCATAGGGGTAGCCTA  900

seq1  A-GACCATGGAAAACACAGATTTTTATGTTAACT--ATTCATAACA-GTA  945
      | |||||||||||||||||||| |||||||||||   ||||||||| |||
seq2  AGGACCATGGAAAACACAGATTGTTATGTTAACTTATTTCATAACAGGTA  950

seq1  GCAAAATTACAGTTAGGAAATAGTAACAAAAATGCTTTTATGGCTGAGGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCAAAATTACAGTTAGGAAATAGTAACAAAAATGCTTTTATGGCTGAAGT  1000

seq1  CACCACAACTTGGGGAACTGCATTAAAAGGTCACAGCAGTAGGGAGGTTG  1045
      |||||||||||||||||||||||  ||| |||||||||||| ||||  ||
seq2  CACCACAACTTGGGGAACTGCAT--AAAAGTCACAGCAGTACGGAG--TG  1046

seq1  AGAACCGGTGCTTTAAAGATGCT-GTGGTCCTGGAAGACAGGAGTGTTGC  1094
      ||||| | ||||||||||||||| ||||||||| ||    ||||||||| 
seq2  AGAACTGTTGCTTTAAAGATGCTGGTGGTCCTGAAA---CGGAGTGTTG-  1092

seq1  CTGCTTCCCCTTGCTCCCTGGGCTTCCTGTCTGCATC-ACTCTGCAATGC  1143
      ||||||||||||| |||  |||||| ||||||||||| ||||||||||||
seq2  CTGCTTCCCCTTGTTCCTGGGGCTT-CTGTCTGCATCAACTCTGCAATGC  1141

seq1: chr11_67992819_67993931
seq2: B6Ng01-235L05.g_63_1190 (reverse)

seq1  TTGCT-ACAGTGAAGCAACTTGGGGAAAAAGTG-TTTATTT--GGC-TTC  45
      ||||| |||||||||| |||| ||| ||||||| |||||||  ||| |||
seq2  TTGCTAACAGTGAAGCCACTTTGGGGAAAAGTGCTTTATTTCGGGCTTTC  50

seq1  TACTTCCACACTGTGGTCCATCACTGAAG-AAAGTCA-GGACAGGAACT-  92
      |||| ||||  |||||||||||| ||||| ||||||| ||||||||||| 
seq2  TACTACCACCTTGTGGTCCATCATTGAAGAAAAGTCAGGGACAGGAACTC  100

seq1  CAAACAGAGCA-GGAAACTGG-AGGCAGGAAC-TGATGTGGAGG-CCATG  138
      ||||||||||| |||| |||| |||||||||| ||||||||||| |||||
seq2  CAAACAGAGCAGGGAACCTGGAAGGCAGGAACTTGATGTGGAGGCCCATG  150

seq1  GAGGGTCCTGCTTACTGGCTTGCTCATGA-CGGC-TTGCTCAGCCTGCTT  186
      ||||||||||||||||||||||||||||| |||| |||||||||||||||
seq2  GAGGGTCCTGCTTACTGGCTTGCTCATGACCGGCTTTGCTCAGCCTGCTT  200

seq1  ATTTATAGGATCCAAGACCACCAGCCCAGGCATGGGTCCCACCCACAATG  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGGATCCAAGACCACCAGCCCAGGCATGGGTCCCACCCACAATG  250

seq1  GGCTGGGCCC-TTCCCCATCAATCACTAATTAATAAAATACTCTACAGCT  285
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGCCCTTTCCCCATCAATCACTAATTAATAAAATACTCTACAGCT  300

seq1  GGATCTTAAGGAGACATTTTCTCAATTGAGGTTTTCTCCTTTAGATAAGT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTAAGGAGACATTTTCTCAATTGAGGTTTTCTCCTTTAGATAAGT  350

seq1  CTTGCTTGTATCAAGTTGACATAAAACTAGTCAACACCCGGTATTATCCA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTGTATCAAGTTGACATAAAACTAGTCAACACCCGGTATTATCCA  400

seq1  GGTAGTCTAAAACTTTCCCTGATGATAAAGCACATGGTGTTCCTGCTAAA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTCTAAAACTTTCCCTGATGATAAAGCACATGGTGTTCCTGCTAAA  450

seq1  AATTCCTGGGCCGCATCCTGGACCAACGAAGAGGATGCTCTAAGCCAGGG  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGGGCCGCATCCTGGACCAACGAAGAGGATGCTCTAAGCCAGGG  500

seq1  GCCTGGGAAGCTGGTGAACAGAACCTAGAAAATGCAAGATTCTAAGGCCA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGAAGCTGGTGAACAGAACCTAGAAAATGCAAGATTCTAAGGCCA  550

seq1  AACCCACTGCTGGAAACCAAGCCTAACCCATAACCATGAAAGACGGAGTT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACTGCTGGAAACCAAGCCTAACCCATAACCATGAAAGACGGAGTT  600

seq1  GCTAATTAAAGGGGGTGGGGCGAGGCTGAGAAGGCTGACTTTTTATGTCC  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTAAAGGGGGTGGGGCGAGGCTGAGAAGGCTGACTTTTTATGTCC  650

seq1  TACAAAGTCAAATGAGAAATAGTTTGATGTTCTTTTTCCCTGCTTACCTG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTCAAATGAGAAATAGTTTGATGTTCTTTTTCCCTGCTTACCTG  700

seq1  CACCTCTCCAGCTCTCAAAGCTTCCTCATTCTGGTATGTTAAAGTGTAGG  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTCCAGCTCTCAAAGCTTCCTCATTCTGGTATGTTAAAGTGTAGG  750

seq1  TCTGGAGCCAGCCATTATTCTTTTGATGAGAAGATTCTTCATTTATTTTC  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGCCAGCCATTATTCTTTTGATGAGAAGATTCTTCATTTATTTTC  800

seq1  TCCTCGACAACTATTGCAGAGAGTCGTTTTCTAGCTGGATGTGATGGCAC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGACAACTATTGCAGAGAGTCGTTTTCTAGCTGGATGTGATGGCAC  850

seq1  ATGCCATCTCAGCTCAGGGATGCAGAGGTGGATCATCTCTGTGAGTTTGA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATCTCAGCTCAGGGATGCAGAGGTGGATCATCTCTGTGAGTTTGA  900

seq1  GACTAGACAGTGACTTCCAGGCCAGCCATGGCCACATAGTGGGGCCATGT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGACAGTGACTTCCAGGCCAGCCATGGCCACATAGTGGGGCCATGT  950

seq1  CTGAAAAATCACAACAAAGTACTTCTCAGCAGCTGGGAGTGCAAACAGTC  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAATCACAACAAAGTACTTCTCAGCAGCTGGGAGTGCAAACAGTC  1000

seq1  AGGCTTCAGCCTCGCACGGGTCAGGTCCGGGGTTCGATGCCCAACCCGGC  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCAGCCTCGCACGGGTCAGGTCCGGGGTTCGATGCCCAACCCGGC  1050

seq1  TTTTTAAACACATATTTTTCATCTGTCTGGGCTGTTTAAATTCAAGAATA  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAACACATATTTTTCATCTGTCTGGGCTGTTTAAATTCAAGAATA  1100

seq1  GCTTTATATGCTTTTAAAGAAAGAATTC  1113
      ||||||||||||||||||||||||||||
seq2  GCTTTATATGCTTTTAAAGAAAGAATTC  1128

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information