BAC Information

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BAC

Clone NameB6Ng01-236G07
Chromosome11 (Build37)
Map Location 17,917,320 - 17,918,448
singlet/doubletsinglet
Overlap genenone
Upstream gene1500041B16Rik, LOC100042644, Ppp3r1, Pno1, AI553587, C1d, LOC382486, EG665748, Etaa1, LOC327871
Downstream geneLOC627696, LOC627716, LOC665796, Meis1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236G07.bB6Ng01-236G07.g
ACCGA047623GA047624
length1,1301,133
definitionB6Ng01-236G07.b B6Ng01-236G07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcactggacctgaaacacagcatttaagctagactgactggttg
ggaagtcctagccatccttttagctctgctgcctataggactgggcaaca
ggcatatacggccacactcatgcttttactctagtctgtaggatccaagt
tcagttcttcaagcttgtatagcaggaagctcttagccagtaagctatct
tcccagcatgcattagattcttgttcttggagattatttaaattctcata
gactctagtagtttgctatcaataaaatgaaaagctcaatggtgcctata
tggtgctatccttggaacaaatagcatattttttaaccagcaaatagtct
attgatcaatggtttctaagacacagtatttataataggtatggctacaa
atagttgccaatctctctataaagatcttggaagtactattcactatctg
atattatattggaagaaagtgccttattctgagatcttgaatcatgattt
agtgtttgtgtctttgcaaaacgtctcttagtcactcctgtcagatctga
tgcactgaaaactcagaaacagagctttgcttgatagccggatatcaaag
gggcctcgaatcaggaggaagaggctcaattttagtttacaaataatctt
gcatgtttcaaaaatctaagtcaggtgtgtgcattgtcagatctcatgga
gcaaacatatcaaccctctgatttgcaacaaatatgtcattatgttcttt
ttaacataacctgaagtttcaggacaggcacttcttctttagaccatgaa
gacttggcctatagtttcctacagcctctggttcttctgatctaagataa
atacaaacagtcggtactcaatcttctgcccttctaagccttgcacttct
ctcacagtttaagaagacagttggcattttaccaaaaacactaaccattt
gagaagtcattttgtcttttcttgatcttagtatgtctgtagaaacatgc
agctctttcttcccagaagtgattgtcttgcaaaatcatacttcagcctc
ttggtgagtatgttgcctttgcatttctctctgcacaaatatctccattg
tctgcctgcaacatgtttgtgtaaaagtta
gaattctcacgtgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacactagtcagaatggctaagatcaaaaattcatgtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtttggaggttcctca
gaaaattggacataatactaccagaggatccagcaatacctctcctggtc
atatatccagaagatgttccaaccggtaaggaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggagtggatacagaaaatgtggtacatttacacaatg
gagtactacacagctattaaaaggaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaaac
ttaggatacccaagacataaaatacaatttgttaaatgaatgaaactcaa
gaagaaagaaaaccaaagtgtggacactgtgcccttcttagaattgggaa
caaaacacccagggaaggagttacagagataaagtttggagctttgatga
aaggatggaccatctaaagactgccatatccaggtatccatcccataatc
agcttccaaacgctgacaccattgcataaactagcaagattttgctgaaa
ggacccaaatatagctgtctcttgtgagactatgccggggcctagcaaac
acaggagtgaatgctcatagtcagctatgatggatcacaggccccaatgg
aggagctagagaaagtaccagaagctaaaggatctgcaactttagtgaac
acatatgaactacagtacccagagctctggaacatagctgcatatggtca
aaagatgctaagtcggccatcatggagagcattggactgcacttagcctg
aacgtaagcaggtcatgtgattgtgtgctacga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_17917320_17918448
seq2: B6Ng01-236G07.b_44_1173

seq1  GAATTCTCACTGGACCTGAAACACAGCATTTAAGCTAGACTGACTGGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTGGACCTGAAACACAGCATTTAAGCTAGACTGACTGGTTG  50

seq1  GGAAGTCCTAGCCATCCTTTTAGCTCTGCTGCCTATAGGACTGGGCAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCCTAGCCATCCTTTTAGCTCTGCTGCCTATAGGACTGGGCAACA  100

seq1  GGCATATACGGCCACACTCATGCTTTTACTCTAGTCTGTAGGATCCAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATACGGCCACACTCATGCTTTTACTCTAGTCTGTAGGATCCAAGT  150

seq1  TCAGTTCTTCAAGCTTGTATAGCAGGAAGCTCTTAGCCAGTAAGCTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTTCAAGCTTGTATAGCAGGAAGCTCTTAGCCAGTAAGCTATCT  200

seq1  TCCCAGCATGCATTAGATTCTTGTTCTTGGAGATTATTTAAATTCTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCATGCATTAGATTCTTGTTCTTGGAGATTATTTAAATTCTCATA  250

seq1  GACTCTAGTAGTTTGCTATCAATAAAATGAAAAGCTCAATGGTGCCTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTAGTAGTTTGCTATCAATAAAATGAAAAGCTCAATGGTGCCTATA  300

seq1  TGGTGCTATCCTTGGAACAAATAGCATATTTTTTAACCAGCAAATAGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTATCCTTGGAACAAATAGCATATTTTTTAACCAGCAAATAGTCT  350

seq1  ATTGATCAATGGTTTCTAAGACACAGTATTTATAATAGGTATGGCTACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCAATGGTTTCTAAGACACAGTATTTATAATAGGTATGGCTACAA  400

seq1  ATAGTTGCCAATCTCTCTATAAAGATCTTGGAAGTACTATTCACTATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTGCCAATCTCTCTATAAAGATCTTGGAAGTACTATTCACTATCTG  450

seq1  ATATTATATTGGAAGAAAGTGCCTTATTCTGAGATCTTGAATCATGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATTGGAAGAAAGTGCCTTATTCTGAGATCTTGAATCATGATTT  500

seq1  AGTGTTTGTGTCTTTGCAAAACGTCTCTTAGTCACTCCTGTCAGATCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGTGTCTTTGCAAAACGTCTCTTAGTCACTCCTGTCAGATCTGA  550

seq1  TGCACTGAAAACTCAGAAACAGAGCTTTGCTTGATAGCCGGATATCAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGAAAACTCAGAAACAGAGCTTTGCTTGATAGCCGGATATCAAAG  600

seq1  GGGCCTCGAATCAGGAGGAAGAGGCTCAATTTTAGTTTACAAATAATCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCGAATCAGGAGGAAGAGGCTCAATTTTAGTTTACAAATAATCTT  650

seq1  GCATGTTTCAAAAATCTAAGTCAGGTGTGTGCATTGTCAGATCTCATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTTCAAAAATCTAAGTCAGGTGTGTGCATTGTCAGATCTCATGGA  700

seq1  GCAAACATATCAACCCTCTGATTTGCAACAAATATGTCATTATGTTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACATATCAACCCTCTGATTTGCAACAAATATGTCATTATGTTCTTT  750

seq1  TTAACATAACCTGAAGTTTCAGGACAGGCACTTCTTCTTTAGACCATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATAACCTGAAGTTTCAGGACAGGCACTTCTTCTTTAGACCATGAA  800

seq1  GACTTGGCCTATAGTTTCCTACAGCCTCTGGTTCTTCTGATCTAAGATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGCCTATAGTTTCCTACAGCCTCTGGTTCTTCTGATCTAAGATAA  850

seq1  ATACAAACAGTCGGTACTCAATCTTCTGCCCTTCTAAGCCTTGCACTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAACAGTCGGTACTCAATCTTCTGCCCTTCTAAGCCTTGCACTTCT  900

seq1  CTCACAGTTTAAGAAGACAGTTGGCATTTTACCAAAAACACTAACCATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGTTTAAGAAGACAGTTGGCATTTTACCAAAAACACTAACCATTT  950

seq1  GAGAAGTCATTTTGTCTTTTCTTGATCTTAGTATGTCTGTAGAAACATGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTCATTTTGTCTTTTCTTGATCTTAGTATGTCTGTAGAAACATGC  1000

seq1  AGGCTCTTTCTTCCCAGAAGTGATTGTCTTGCAAAATCATTACTTCAGCC  1050
      | ||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  A-GCTCTTTCTTCCCAGAAGTGATTGTCTTGCAAAATCA-TACTTCAGCC  1048

seq1  TCTTGGTGAGTATTGTGGCTTTGCATTTCTCTCTGCAC-AATATCT-CAT  1098
      |||||||||||||  || |||||||||||||||||||| ||||||| |||
seq2  TCTTGGTGAGTATGTTGCCTTTGCATTTCTCTCTGCACAAATATCTCCAT  1098

seq1  TGTCTGCCTGCAACATG-TTGTGTAGAAGTTA  1129
      ||||||||||||||||| ||||||| ||||||
seq2  TGTCTGCCTGCAACATGTTTGTGTAAAAGTTA  1130