BAC Information

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BAC

Clone NameB6Ng01-236G20
Chromosome11 (Build37)
Map Location 93,742,315 - 93,742,818
singlet/doubletsinglet
Overlap geneUtp18
Upstream geneLOC100039286, Car10, LOC629636
Downstream geneMbtd1, Nme2, Nme1, Spag9, LOC100039431, LOC100039440, Tob1, Wfikkn2, 3300001P08Rik, Ankrd40, Abcc3, Cacna1g, Spata20, Epn3, Mycbpap, Rsad1, BC018371, Chad, Lrrc59, Eme1, Mrpl27, Xylt2, OTTMUSG00000002038, Cdc34-ps, A430060F13Rik, Tmem92, LOC100039410, LOC544807, LOC544808, LOC665174, LOC432591, LOC100039739
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236G20.bB6Ng01-236G20.g
ACCGA047647GA047648
length1,203498
definitionB6Ng01-236G20.b B6Ng01-236G20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatagtaaaagcaatctacagcaaacca
ggagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaatgctgcccactttctccctaccttttcaacatag
tacttgaactattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatggtat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagctttggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaagtag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgcatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacctctggtggaatca
ccatgcctgatctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacgtgatctttgacaagggag
ctaaaaccatccactggaagaaagacagcattttcaacaattggtgctgg
cacaactggttgttatcatgtagaagaatgcgatcgatccatacttatct
ccttgtactaagtcaaatctaagtggatcaggacttcacataaaaccaga
gacactgaacttatagaggagaaagtggagaaaagtctttgaagattatg
gcacagggcaaaattcctgaaccgacaggcatggccttgtgcgtagatcg
aattgacaatgggaccttatgaaactccaaggtttctgtgcaaagggcat
gac
ctctgtgggaatcagaaaccatatgatcaaggaggttttctttcattttc
agtatcatgtctaagaaactagcagctgaccaattaatattaagttctgt
tgactctcataatccaccaatgtacttaccttcattgctttttctttaac
ataatgatttcattatttgtttttgtttgttttaaaaaaatgttcactcc
ttactgtgtatgagaggtcaatagacaacttcctggagtcagaaagtttt
ctctttccaccatatgggttccagggattgaatttaggtcattaggcttg
gtgacaagtactgttattacctgctggtagccagaggagtcttaccccac
cttctcccagtctctcattgcctgggctggcctcggcctcactatagagc
tgaagatgatcttgacctttgatcatcctgcctgcctgctttttccaaga
gttgggattacaggtgtatgttgggtatgtatgtatgtatgtatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_93742315_93742818
seq2: B6Ng01-236G20.g_67_570 (reverse)

seq1  ATACATACATACATACATACATACCCAACATACACCTGTAATCCCAACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACATACATACATACATACCCAACATACACCTGTAATCCCAACTC  50

seq1  TTGGAAAAAGCAGGCAGGCAGGATGATCAAAGGTCAAGATCATCTTCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAAAGCAGGCAGGCAGGATGATCAAAGGTCAAGATCATCTTCAGC  100

seq1  TCTATAGTGAGGCCGAGGCCAGCCCAGGCAATGAGAGACTGGGAGAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAGTGAGGCCGAGGCCAGCCCAGGCAATGAGAGACTGGGAGAAGGT  150

seq1  GGGGTAAGACTCCTCTGGCTACCAGCAGGTAATAACAGTACTTGTCACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAAGACTCCTCTGGCTACCAGCAGGTAATAACAGTACTTGTCACCA  200

seq1  AGCCTAATGACCTAAATTCAATCCCTGGAACCCATATGGTGGAAAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAATGACCTAAATTCAATCCCTGGAACCCATATGGTGGAAAGAGAA  250

seq1  AACTTTCTGACTCCAGGAAGTTGTCTATTGACCTCTCATACACAGTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCTGACTCCAGGAAGTTGTCTATTGACCTCTCATACACAGTAAGG  300

seq1  AGTGAACATTTTTTTAAAACAAACAAAAACAAATAATGAAATCATTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACATTTTTTTAAAACAAACAAAAACAAATAATGAAATCATTATGT  350

seq1  TAAAGAAAAAGCAATGAAGGTAAGTACATTGGTGGATTATGAGAGTCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAAAGCAATGAAGGTAAGTACATTGGTGGATTATGAGAGTCAAC  400

seq1  AGAACTTAATATTAATTGGTCAGCTGCTAGTTTCTTAGACATGATACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTAATATTAATTGGTCAGCTGCTAGTTTCTTAGACATGATACTGA  450

seq1  AAATGAAAGAAAACCTCCTTGATCATATGGTTTCTGATTCCCACAGAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAAGAAAACCTCCTTGATCATATGGTTTCTGATTCCCACAGAGGA  500

seq1  ATTC  504
      ||||
seq2  ATTC  504