BAC Information

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BAC

Clone NameB6Ng01-237O10
Chromosome11 (Build37)
Map Location 74,539,221 - 74,643,722
singlet/doubletdoublet
Overlap geneMett10d
Upstream geneOlfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4, E130309D14Rik, 1300001I01Rik, Pafah1b1
Downstream geneMnt, Rutbc1, Tsr1, Srr, LOC100042478, Smg6, LOC100043429, LOC627835, Hic1, LOC668604, Ovca2, Dph1, Rtn4rl1, Rpa1, Smyd4, Serpinf1, LOC100043447, Serpinf2, Wdr81, LOC100042498, 2010305C02Rik, Prpf8, Rilp, Scarf1, Slc43a2, Pitpna, LOC654359, Pps, Myo1c, Crk, Ywhae, Doc2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237O10.bB6Ng01-237O10.g
ACCGA048740GA048741
length1,1501,139
definitionB6Ng01-237O10.b B6Ng01-237O10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,539,221 - 74,540,377)(74,642,585 - 74,643,722)
sequence
gaattccaggacagacaactacatagagaaaccctgtctccaagaataaa
taataatggagcaaaccttgggtggaaggaagcacacatcccttattcca
gcatggaatggctgaagaatgaggatcacaagtttaagggctacctggaa
aactcaaatgtttttaaatttatcacttttaaaagggtgaagagacagct
cagtaggagagtacttgctgagagaaagaaaagaaaacattatagaattg
acatagctgtgaggctttgtgagattagatgttgcatgggttaaggcctg
aggtttgatgtgtaactcatgtaaccattactatctagtaccaaagccag
gctctttgtattgggatgggctatctttatccctagaaatttttttaaaa
aacataaaccaatgaccttaagggattagttctttttttttttttcttca
tcaacacaagaaactaaatcaaataatctttaaaaggttatgtccagagt
ttcagtttttggattctatagtcaaaactatggacagcatgagacagagg
cttgatcctatcacttatatccaaaagcagccaagaaacattcattaaat
taaattgtccctgattctccctgattctaagaattcacccacctctcata
ttttatcttttgaaatatttaatattgcctggtatcttgtttaatattta
atcagatgagtgaataagttcttttgggttttttttttttaatgaatgct
ctaaaagtcaacaaaattgcttggaagcacattgataaacaccaacttaa
tacaagtaggtagccttaactcgcataagccttgagatcacatgctttta
tgtatagaaaaaaatgtaagacctaggattgtacaattatgtcctaaaat
aagtaaagattttatttttgtagcaatccttcaaaaaagcagtaagtcct
cctttgggggaagatataacatttttctccctggattatatttttctgaa
cagatatatgcttaagttgacatgaagcagtgtgtacagtcctgtggcgt
ttcagtaggtgctacaccttgtatatccacttgacaatacttgtctaatg
aattgggagatcagactctgggtgcatcatctaagttcaatagtccttct

gaattccgcagtccatcccctgctttacattaccctcccattcaaaacca
gggcttacttcccttctcctaaattctttgtccaccggtttctgatatgg
gtggggactaaaagtgtgccactctagagggcacctcgttgttgggcccc
ggcaccagtaatcaaaaggagaagcgtccaaagcccaggccgaggaggcg
tggcctaaatcaggaacaacaacgtggagggcggaagccgcgcgctaccc
tagcggcccgctgggcgcggggcggggtcgctcactgtgttgggttggaa
ccgcgcactctcctaagctcgccagtcagtctttatcttggctgcagggc
ttaggactgtccctaggtacagtcagaaagatctttgaagtcagcttgcc
caaatcattgcactttgcaggtaagaaaactgaggcccaagtgaagggac
tactccaactgctccttgttcattgagcaactcgtagtctagtcagacct
ctctcaaccgccagctgcctcttaccacctcgggtcctcgcaaaagtgaa
gaactatcaaactgcagttcaggaagggggctgagcacttacatcttctt
gattaggacaacaaaaatatcctacatctggaactctctttggtggaaag
ccatacaatctccattcgtacagttagcattgaaaagcactagaatatta
tgggcacaacgaagccgatgcaattactctcagtgctagggatagtcagt
tacctgttaatgcttcaacctccatggtagccaatgcaagggaaatggag
acatgccagtcggtgctttcaggatcttgggctccatcgcacagcaccgg
aaacccaaccataagatcgtagagcgggccaccgtgacatccaacctatc
caacattacctgcctacttcaggagctgccaggaacacagaacaaaagag
gggtggcgggtctcccttccccttcagtttatcctagaagaaagaacacc
cggcacagctgaatggagtctttgatcttgatgttatgaactgttagcgt
gtgaactggagcatgaatacctcttatgcaaatgttccagtgtcactaag
agctaagcaaggaaaatacctagggaatacctaggtaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_74539221_74540377
seq2: B6Ng01-237O10.b_45_1194

seq1  GAATTCCAGGACAGACAACTACATAGAGAAACCCTGTCTCCAAGAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGACAACTACATAGAGAAACCCTGTCTCCAAGAATAAA  50

seq1  TAATAATGGAGCAAACCTTGGGTGGAAGGAAGCACACATCCCTTATTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGGAGCAAACCTTGGGTGGAAGGAAGCACACATCCCTTATTCCA  100

seq1  GCATGGAATGGCTGAAGAATGAGGATCACAAGTTTAAGGGCTACCTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGAATGGCTGAAGAATGAGGATCACAAGTTTAAGGGCTACCTGGAA  150

seq1  AACTCAAATGTTTTTAAATTTATCACTTTTAAAAGGGTGAAGAGACAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAATGTTTTTAAATTTATCACTTTTAAAAGGGTGAAGAGACAGCT  200

seq1  CAGTAGGAGAGTACTTGCTGAGAGAAAGAAAAGAAAACATTATAGAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGGAGAGTACTTGCTGAGAGAAAGAAAAGAAAACATTATAGAATTG  250

seq1  ACATAGCTGTGAGGCTTTGTGAGATTAGATGTTGCATGGGTTAAGGCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCTGTGAGGCTTTGTGAGATTAGATGTTGCATGGGTTAAGGCCTG  300

seq1  AGGTTTGATGTGTAACTCATGTAACCATTACTATCTAGTACCAAAGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGATGTGTAACTCATGTAACCATTACTATCTAGTACCAAAGCCAG  350

seq1  GCTCTTTGTATTGGGATGGGCTATCTTTATCCCTAGAAATTTTTTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTGTATTGGGATGGGCTATCTTTATCCCTAGAAATTTTTTTAAAA  400

seq1  AACATAAACCAATGACCTTAAGGGATTAGTTCTTTTTTTTTTTTTCTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAACCAATGACCTTAAGGGATTAGTTCTTTTTTTTTTTTTCTTCA  450

seq1  TCAACACAAGAAACTAAATCAAATAATCTTTAAAAGGTTATGTCCAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACAAGAAACTAAATCAAATAATCTTTAAAAGGTTATGTCCAGAGT  500

seq1  TTCAGTTTTTGGATTCTATAGTCAAAACTATGGACAGCATGAGACAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTTTGGATTCTATAGTCAAAACTATGGACAGCATGAGACAGAGG  550

seq1  CTTGATCCTATCACTTATATCCAAAAGCAGCCAAGAAACATTCATTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATCCTATCACTTATATCCAAAAGCAGCCAAGAAACATTCATTAAAT  600

seq1  TAAATTGTCCCTGATTCTCCCTGATTCTAAGAATTCACCCACCTCTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGTCCCTGATTCTCCCTGATTCTAAGAATTCACCCACCTCTCATA  650

seq1  TTTTATCTTTTGAAATATTTAATATTGCCTGGTATCTTGTTTAATATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTTTTGAAATATTTAATATTGCCTGGTATCTTGTTTAATATTTA  700

seq1  ATCAGATGAGTGAATAAGTTCTTTTGGGTTTTTTTTTTTTAATGAATGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATGAGTGAATAAGTTCTTTTGGGTTTTTTTTTTTTAATGAATGCT  750

seq1  CTAAAAGTCAACAAAATTGCTTGGAAGCACATTGATAAACACCAACTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGTCAACAAAATTGCTTGGAAGCACATTGATAAACACCAACTTAA  800

seq1  TACAAGTAGGTAGCCTTAACTCGCATAAGCCTTGAGATCACATGCTTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTAGGTAGCCTTAACTCGCATAAGCCTTGAGATCACATGCTTTTA  850

seq1  TGTATAGAAAAAAATGTAAGACCTA-GATTGTACAATTATGTCCTAAAAT  899
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGTATAGAAAAAAATGTAAGACCTAGGATTGTACAATTATGTCCTAAAAT  900

seq1  AAGTAAAGATTTTATTTTTGTAGCAATCCTTCAAAAAAGCAGTAAGT-CT  948
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGTAAAGATTTTATTTTTGTAGCAATCCTTCAAAAAAGCAGTAAGTCCT  950

seq1  CCTTTGGGGGAAGATATAACATTTTTCTCCCTGGATTATAATTTTTCTGA  998
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCTTTGGGGGAAGATATAACATTTTTCTCCCTGGATTAT-ATTTTTCTGA  999

seq1  ACAGATTATATGCTTAAGTTGACATGAAGCAAGTGTGTTACAGTTCTGTG  1048
      ||||| |||||||||||||||||||||||| |||||| |||||| |||||
seq2  ACAGA-TATATGCTTAAGTTGACATGAAGC-AGTGTG-TACAGTCCTGTG  1046

seq1  CGTTTTCAGTTAGTTGCTA-ACACTGTATATCCACTTTGACAAATACTTG  1097
         |||||| ||| ||||| ||  ||||||||||| ||||| ||||||||
seq2  GCGTTTCAG-TAGGTGCTACACCTTGTATATCCAC-TTGAC-AATACTTG  1093

seq1  TCTAATGAAAATGGAGAATTAAGACATCTGTG-CCATCAATCATAGTTCA  1146
      |||||||||   |||||  | |||| |||| |  |||| |||  ||||||
seq2  TCTAATGAATTGGGAGA--TCAGAC-TCTGGGTGCATC-ATCTAAGTTCA  1139

seq1  TAAGTCCTTCT  1157
        |||||||||
seq2  ATAGTCCTTCT  1150

seq1: chr11_74642585_74643722
seq2: B6Ng01-237O10.g_63_1201 (reverse)

seq1  GTTACCTA-GTATATCCCTA-GTATTTTCCTTTGCTTTAGCTTCTTAGTG  48
      |||||||| |||| |||||| ||||||||| |||| ||||| ||||||||
seq2  GTTACCTAGGTAT-TCCCTAGGTATTTTCC-TTGC-TTAGC-TCTTAGTG  46

seq1  ACACTGG-ACATTTGCATAAGAGTTATTCATGCTCAGGTTCACACGCT-A  96
      ||||||| ||||||||||||||| |||||||||||  ||||||||||| |
seq2  ACACTGGAACATTTGCATAAGAGGTATTCATGCTCCAGTTCACACGCTAA  96

seq1  CAGTTCAATACATCAAGATCAAAGACTCCATTCAGCTGTGCCGGGTG-TC  145
      |||||||  |||||||||||||||||||||||||||||||||||||| ||
seq2  CAGTTCATAACATCAAGATCAAAGACTCCATTCAGCTGTGCCGGGTGTTC  146

seq1  TTTC-TCTAGGATAAACCTGAAGGGGAAGGGAGACCCGCCA-CCCTCTTT  193
      |||| ||||||||||| |||||||||||||||||||||||| ||||||||
seq2  TTTCTTCTAGGATAAA-CTGAAGGGGAAGGGAGACCCGCCACCCCTCTTT  195

seq1  TGTTCTGTGTTCCTGGCAGCTCCTGAAGTAGGCAGGTAATGTTGGATAGG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTGTTCCTGGCAGCTCCTGAAGTAGGCAGGTAATGTTGGATAGG  245

seq1  TTGGATTGTCACGGTGGCCCGCTCTACGATCTTATGGTTGGGTTTCCGGT  293
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGA-TGTCACGGTGGCCCGCTCTACGATCTTATGGTTGGGTTTCCGGT  294

seq1  GCTGTGCGATGGAGCCCAAGATCCTGAAAGCACCGACTGGCATGTCTCCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCGATGGAGCCCAAGATCCTGAAAGCACCGACTGGCATGTCTCCA  344

seq1  TTTCCCTTGCATTGGCTACCATGGAGGTTGAAGCATTAACAGGTAACTGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTGCATTGGCTACCATGGAGGTTGAAGCATTAACAGGTAACTGA  394

seq1  CTATCCCTAGCACTGAGAGTAATTGCATCGGCTTCGTTGTGCCCATAATA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCCTAGCACTGAGAGTAATTGCATCGGCTTCGTTGTGCCCATAATA  444

seq1  TTCTAGTGCTTTTCAATGCTAACTGTACGAATGGAGATTGTATGGCTTTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTGCTTTTCAATGCTAACTGTACGAATGGAGATTGTATGGCTTTC  494

seq1  CACCAAAGAGAGTTCCAGATGTAGGATATTTTTGTTGTCCTAATCAAGAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAGAGAGTTCCAGATGTAGGATATTTTTGTTGTCCTAATCAAGAA  544

seq1  GATGTAAGTGCTCAGCCCCCTTCCTGAACTGCAGTTTGATAGTTCTTCAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAAGTGCTCAGCCCCCTTCCTGAACTGCAGTTTGATAGTTCTTCAC  594

seq1  TTTTGCGAGGACCCGAGGTGGTAAGAGGCAGCTGGCGGTTGAGAGAGGTC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCGAGGACCCGAGGTGGTAAGAGGCAGCTGGCGGTTGAGAGAGGTC  644

seq1  TGACTAGACTACGAGTTGCTCAATGAACAAGGAGCAGTTGGAGTAGTCCC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGACTACGAGTTGCTCAATGAACAAGGAGCAGTTGGAGTAGTCCC  694

seq1  TTCACTTGGGCCTCAGTTTTCTTACCTGCAAAGTGCAATGATTTGGGCAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTGGGCCTCAGTTTTCTTACCTGCAAAGTGCAATGATTTGGGCAA  744

seq1  GCTGACTTCAAAGATCTTTCTGACTGTACCTAGGGACAGTCCTAAGCCCT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTTCAAAGATCTTTCTGACTGTACCTAGGGACAGTCCTAAGCCCT  794

seq1  GCAGCCAAGATAAAGACTGACTGGCGAGCTTAGGAGAGTGCGCGGTTCCA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAAGATAAAGACTGACTGGCGAGCTTAGGAGAGTGCGCGGTTCCA  844

seq1  ACCCAACACAGTGAGCGACCCCGCCCCGCGCCCAGCGGGCCGCTAGGGTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACACAGTGAGCGACCCCGCCCCGCGCCCAGCGGGCCGCTAGGGTA  894

seq1  GCGCGCGGCTTCCGCCCTCCACGTTGTTGTTCCTGATTTAGGCCACGCCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCGCGGCTTCCGCCCTCCACGTTGTTGTTCCTGATTTAGGCCACGCCT  944

seq1  CCTCGGCCTGGGCTTTGGACGCTTCTCCTTTTGATTACTGGTGCCGGGGC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGCCTGGGCTTTGGACGCTTCTCCTTTTGATTACTGGTGCCGGGGC  994

seq1  CCAACAACGAGGTGCCCTCTAGAGTGGCACACTTTTAGTCCCCACCCATA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAACGAGGTGCCCTCTAGAGTGGCACACTTTTAGTCCCCACCCATA  1044

seq1  TCAGAAACCGGTGGACAAAGAATTTAGGAGAAGGGAAGTAAGCCCTGGTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAACCGGTGGACAAAGAATTTAGGAGAAGGGAAGTAAGCCCTGGTT  1094

seq1  TTGAATGGGAGGGTAATGTAAAGCAGGGGATGGACTGCGGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGGGAGGGTAATGTAAAGCAGGGGATGGACTGCGGAATTC  1139