BAC Information

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BAC

Clone NameB6Ng01-238C10
Chromosome11 (Build37)
Map Location 74,670,741 - 74,816,231
singlet/doubletdoublet
Overlap geneRutbc1, Tsr1, Srr, LOC100042478, Smg6
Upstream geneOlfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4, E130309D14Rik, 1300001I01Rik, Pafah1b1, Mett10d, Mnt
Downstream geneLOC100043429, LOC627835, Hic1, LOC668604, Ovca2, Dph1, Rtn4rl1, Rpa1, Smyd4, Serpinf1, LOC100043447, Serpinf2, Wdr81, LOC100042498, 2010305C02Rik, Prpf8, Rilp, Scarf1, Slc43a2, Pitpna, LOC654359, Pps, Myo1c, Crk, Ywhae, Doc2b, Rph3al, 1700016K19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238C10.bB6Ng01-238C10.g
ACCGA048922GA048923
length599138
definitionB6Ng01-238C10.b B6Ng01-238C10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,815,685 - 74,816,231)(74,670,741 - 74,670,878)
sequence
gaattctcaactgaggaaacttgaatggctgagaaacacctaatgaaatg
ttcaacatccttagtcatcagaaaaatgtaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatggcaaagatcaaaaactcaggtgacagc
agatgctggggaggatgtggagaaagaagaacactcctccactgttggtg
agattgcaagctggtacaaccactctggaaatcagtctggtggttcctta
gaaaattgaacatagtattacctgaggacccagcaatttttttgtttgtt
ttttagtttgttcggtttttttgttttttgttttttgtttttttctagtc
agggtttctctgtatagccctggttgtcctggaactcactttgtagacca
ggctggcctcaaactcagaagtctgcctgcctctgcctcccaagtgctgg
gattaaaggcgtgcaccaccatgcccggccagctattttttttttaatat
tctgaaaaaaattaacagtttattataatttaatttaacaatctaggaag
tttaacaaactgcagtttgcagttccaggagggggagtgggatggggga
gcaggggaatggagaagtttggtgactggggccagacaccggacagcctt
gctcaaagacactgatctcgccaggaagtcctgggacccatgggcaccct
tgatcacctcacatgctcgtcacggggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_74815685_74816231
seq2: B6Ng01-238C10.b_104_650 (reverse)

seq1  TCCCCCATCCCACTCCCCCTCCTGGAACTGCAAACTGCAGTTTGTTAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCATCCCACTCCCCCTCCTGGAACTGCAAACTGCAGTTTGTTAAAC  50

seq1  TTCCTAGATTGTTAAATTAAATTATAATAAACTGTTAATTTTTTTCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGATTGTTAAATTAAATTATAATAAACTGTTAATTTTTTTCAGAA  100

seq1  TATTAAAAAAAAAATAGCTGGCCGGGCATGGTGGTGCACGCCTTTAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAAAAAAATAGCTGGCCGGGCATGGTGGTGCACGCCTTTAATCC  150

seq1  CAGCACTTGGGAGGCAGAGGCAGGCAGACTTCTGAGTTTGAGGCCAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTGGGAGGCAGAGGCAGGCAGACTTCTGAGTTTGAGGCCAGCCT  200

seq1  GGTCTACAAAGTGAGTTCCAGGACAACCAGGGCTATACAGAGAAACCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTACAAAGTGAGTTCCAGGACAACCAGGGCTATACAGAGAAACCCTG  250

seq1  ACTAGAAAAAAACAAAAAACAAAAAACAAAAAAACCGAACAAACTAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAAAAAACAAAAAACAAAAAACAAAAAAACCGAACAAACTAAAAA  300

seq1  ACAAACAAAAAAATTGCTGGGTCCTCAGGTAATACTATGTTCAATTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAAAAATTGCTGGGTCCTCAGGTAATACTATGTTCAATTTTCT  350

seq1  AAGGAACCACCAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACCACCAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCTC  400

seq1  ACCAACAGTGGAGGAGTGTTCTTCTTTCTCCACATCCTCCCCAGCATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAGTGGAGGAGTGTTCTTCTTTCTCCACATCCTCCCCAGCATCTG  450

seq1  CTGTCACCTGAGTTTTTGATCTTTGCCATTCTGACTGGTGTGAGGTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACCTGAGTTTTTGATCTTTGCCATTCTGACTGGTGTGAGGTGGAA  500

seq1  TCTTAGGGTTGTTTTGATTTACATTTTTCTGATGACTAAGGATGTTG  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGGTTGTTTTGATTTACATTTTTCTGATGACTAAGGATGTTG  547

seq1: chr11_74670741_74670878
seq2: B6Ng01-238C10.g_73_210

seq1  GCAGGGGAATGGAGAAGTTTGGTGACTGGGGCCAGACACCGGACAGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGAATGGAGAAGTTTGGTGACTGGGGCCAGACACCGGACAGCCTT  50

seq1  GCTCAAAGACACTGATCTCGCCAGGAAGTCCTGGGACCCATGGGCACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAAGACACTGATCTCGCCAGGAAGTCCTGGGACCCATGGGCACCCT  100

seq1  TGATCACCTCACATGCTCGTCACGGGGGGGGGGGGGGG  138
      ||||||||||||||||||||||||||||||||||||||
seq2  TGATCACCTCACATGCTCGTCACGGGGGGGGGGGGGGG  138