BAC Information

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BAC

Clone NameB6Ng01-238H14
Chromosome11 (Build37)
Map Location 10,903,096 - 10,904,116
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382483
Downstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238H14.bB6Ng01-238H14.g
ACCGA049159GA049160
length1,0111,200
definitionB6Ng01-238H14.b B6Ng01-238H14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaattgattcattctgcccaccctttctacatctacaggattct
cttctctgttcactctggatcgatgcttaattgtatagatccctgctcct
cagcttcacataggcaagttcatcttggtcaatattgggtgagagcactt
tgtaagaggcgtcagtgtctatcactatgctgtgttcccactgagagtgt
tgccaattgctctcctaccctcaaccatgagttaaagcagtaaaagtcct
tacagtgagctgaacagatgcagacatcatgttctgaaccagccatagac
agtgaccagaacattttcttagtacatcacccaatctgtgtcacctagtc
acagtgtaaaaaactagactgagataaagacctttccccaaaaggcagat
gcttcagatgtttttttcagtgcaaggctaaatgtgccactagacatcat
ggcatgtcatttccttctgatattatcccatctcccatgtctttgtccat
agaacttttatattcctcagaagagaactataaagagggtgtatggtgag
aagcagagaaatttgaagtagttgaaatatcattgatggtaaaaaaaaaa
tacccagaaattctgacaaaggccatatgcatttgttgtttcaaacatga
ctcaatgattccagtaaaatgacagaaagatgcctaagtacaattccttc
cactgagacaaccttcccattagtgtctctttgccttaattttctttctt
tcctttttattctgtatagtcagcagacaggcattcccacaggagattaa
atctgcaggctgatgctttcccattttgttcttgtagtaatgttagaaaa
aaacaatagaaggagtcatgaatactacctgataatctttcaacagtgca
gtctatcttaggcattcaggtgcttctcatctggttcctgacaaatttct
tttggttccacaaaatgagcaagagaatggacaattcctgattatgatga
accaccccagt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatgcccaagatataagttacaatttcctaaagacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctcctttagaagtggga
acaaatcacccttggaaggagttacagagacaaagtttggagctgagatt
aaagggtggaccatgtagagactgccttatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagatttttattcg
aaaggacccagatgtagctgtctcttgtgagactatgccggggcctagca
aacacagaagtggatgcccacagtcagctaatgaatggatcaccagggcc
tcccaatggagagcttagagaaagtacccaaggagctaaaggatcctgca
accctatagggtggatcacatatgactaccagtaccccggagctcttgac
tctagctgcatattaatcacaaaagattggcttagtcggcaatcactgga
agagagaggtcaaattggtaccacaaactttatatgccagaaccggaacg
tcaggttctaaataagggggtacgtgtgcctaggctagtaggtgatgatg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_10903096_10904116
seq2: B6Ng01-238H14.b_41_1051

seq1  GAATTCTAATTGATTCATTCTGCCCACCCTTTCTACATCTACAGGATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTGATTCATTCTGCCCACCCTTTCTACATCTACAGGATTCT  50

seq1  CTTCTCTGTTCACTCTGGATCGATGCTTAATTGTATAGATCCCTGCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGTTCACTCTGGATCGATGCTTAATTGTATAGATCCCTGCTCCT  100

seq1  CAGCTTCACATAGGCAAGTTCATCTTGGTCAATATTGGGTGAGAGCACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCACATAGGCAAGTTCATCTTGGTCAATATTGGGTGAGAGCACTT  150

seq1  TGTAAGAGGCGTCAGTGTCTATCACTATGCTGTGTTCCCACTGAGAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAGGCGTCAGTGTCTATCACTATGCTGTGTTCCCACTGAGAGTGT  200

seq1  TGCCAATTGCTCTCCTACCCTCAACCATGAGTTAAAGCAGTAAAAGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATTGCTCTCCTACCCTCAACCATGAGTTAAAGCAGTAAAAGTCCT  250

seq1  TACAGTGAGCTGAACAGATGCAGACATCATGTTCTGAACCAGCCATAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGAGCTGAACAGATGCAGACATCATGTTCTGAACCAGCCATAGAC  300

seq1  AGTGACCAGAACATTTTCTTAGTACATCACCCAATCTGTGTCACCTAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCAGAACATTTTCTTAGTACATCACCCAATCTGTGTCACCTAGTC  350

seq1  ACAGTGTAAAAAACTAGACTGAGATAAAGACCTTTCCCCAAAAGGCAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTAAAAAACTAGACTGAGATAAAGACCTTTCCCCAAAAGGCAGAT  400

seq1  GCTTCAGATGTTTTTTTCAGTGCAAGGCTAAATGTGCCACTAGACATCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGATGTTTTTTTCAGTGCAAGGCTAAATGTGCCACTAGACATCAT  450

seq1  GGCATGTCATTTCCTTCTGATATTATCCCATCTCCCATGTCTTTGTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTCATTTCCTTCTGATATTATCCCATCTCCCATGTCTTTGTCCAT  500

seq1  AGAACTTTTATATTCCTCAGAAGAGAACTATAAAGAGGGTGTATGGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTTTATATTCCTCAGAAGAGAACTATAAAGAGGGTGTATGGTGAG  550

seq1  AAGCAGAGAAATTTGAAGTAGTTGAAATATCATTGATGTCAAAGATAAAA  600
      ||||||||||||||||||||||||||||||||||||||  ||| | ||||
seq2  AAGCAGAGAAATTTGAAGTAGTTGAAATATCATTGATGGTAAA-AAAAAA  599

seq1  TTACCCAGAAATTCTGACAAAGGCCATATGCATTTGTTGTTTCAAACATG  650
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCAGAAATTCTGACAAAGGCCATATGCATTTGTTGTTTCAAACATG  649

seq1  ACTCAAATGATTCCAGTAAAATGACAGAAAGATGCCTAAGTACAATTCCT  700
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTC-AATGATTCCAGTAAAATGACAGAAAGATGCCTAAGTACAATTCCT  698

seq1  TCCACTGAGACAACCTTCCCATTAGTGTCTCTTTGCCTTAATTTTCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGAGACAACCTTCCCATTAGTGTCTCTTTGCCTTAATTTTCTTTC  748

seq1  TTTCCTTTTTATTCTGTATAGTCAGCAGACAGGCATTCCCACAGGAGAAT  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTCCTTTTTATTCTGTATAGTCAGCAGACAGGCATTCCCACAGGAGATT  798

seq1  AAATCTGCAGGGCTGATGCTTTCCCA-TTTGTTC-TGTAGTAATGTTAGA  848
      ||||||||| |||||||||||||||| ||||||| |||||||||||||||
seq2  AAATCTGCA-GGCTGATGCTTTCCCATTTTGTTCTTGTAGTAATGTTAGA  847

seq1  AAAAA--CATAGAAGGAAGTCCATGAATACTACCTGATAATC-TTCAACA  895
      |||||   |||||||| ||| ||||||||||||||||||||| |||||||
seq2  AAAAAACAATAGAAGG-AGT-CATGAATACTACCTGATAATCTTTCAACA  895

seq1  GTGCAGTCTATC-TAGCAATTCCAGTGCTTCTCATCTGGTTCCTGACCAC  944
      |||||||||||| |||  ||||  |||||||||||||||||||||| || 
seq2  GTGCAGTCTATCTTAGGCATTCAGGTGCTTCTCATCTGGTTCCTGA-CAA  944

seq1  ATTTCTTTTGGTTCACAAAAAATGAGCAAAGAGAATGACAAAATTTTCCC  994
      |||||||||||||| || ||||||||| |||||||||  | ||||    |
seq2  ATTTCTTTTGGTTC-CACAAAATGAGC-AAGAGAATG-GACAATT----C  987

seq1  CAGATTATGAATTGACACAACCCCAGT  1021
      | ||||||||  ||| || ||||||||
seq2  CTGATTATGA--TGA-ACCACCCCAGT  1011