BAC Information

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BAC

Clone NameB6Ng01-238M01
Chromosome11 (Build37)
Map Location 104,861,937 - 104,862,769
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042645, Crhr1, 4933407P14Rik, Mapt, 1700081L11Rik, Cdc27, Myl4, LOC666721, EG629959, Itgb3, LOC666739, LOC629960, LOC666749, LOC632784
Downstream geneLOC276809, LOC100041125, 4921510J17Rik, Mettl2, LOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190, EG666807, Tanc2, LOC667737, Cyb561, Ace, EG217246
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238M01.bB6Ng01-238M01.g
ACCGA049365GA049366
length390834
definitionB6Ng01-238M01.b B6Ng01-238M01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aactctgctcattaaagtaatccactttcttctgatttaaaacagtggta
tttttctagttgacttgttttacttctgtgttctttctctctctctctct
ctctctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtgt
gtgtgcaccctcccccgctctcactcacgtacactctctgtgtgtgtgtg
tgtgtgtctctctttgtctgtgtgaataaaaatctgtgtttctttgtgtg
tgtgtgtgtatatatgagagcgcgagaggggaaggagagtgacccacaaa
gaaaaataaagatagtttgggaatatatcactctctctcatgtaaatatg
ttcttcgttttttttcttactgttatatatagagaagggt
gaattctaataataatcacactgacttataaaactgaccatacaggaaaa
cattatcttgagttatctaaaatgcttcctatttattaatgtgcttactt
aaaatttagctatttacatgtagccaagaaatatttataaatgaaaaata
tgtatccctaaagatacaggagttgtcattaagaataagtcttattctgg
atatggtggcttacatcttcagccccagcatgcagcaggcagaaacagta
ggatctctctataagtttgagactagcctgatctacatggtgaaatccag
gacagctagggctacataaagatgcttcctcattaaacaaacaaccatta
gaaaagggtaaatcttgtggattattctgaatatataagttatcaaataa
gtttgatctgacaaataattgaataaaatgactatgttgttatcaatgat
atattagggaaacatctaagatatttatttatagcatttggatatctgtg
ttggagaaactcacctgtgaactcgttcatttttggcacaatgcttttta
gatcaacctttccagtttctgcacatacaaaaaatatcacagagacaatg
aggctctttttgcttatccctgctaaaattctggcatcatccaaatttta
gttctagatgcctacagtttcagataattaacactaagtagatgaaacat
gtctcttttatttttatttctttcttctatgtagttttatacattgtggt
agctcttactggctcagatgctttaagagctggtccccaactggtggaac
tgtttgggaaggattaggaggttgtggtgttgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_104861937_104862769
seq2: B6Ng01-238M01.g_64_897 (reverse)

seq1  TCCAACACCAC-ACCTCCTAATCCTTCCCAAACAGTTCCACCAGTTGGGG  49
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCCAACACCACAACCTCCTAATCCTTCCCAAACAGTTCCACCAGTTGGGG  50

seq1  ACCAGCTCTTAAAGCATCTGAGCCAGTAAGAGCTACCACAATGTATAAAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTCTTAAAGCATCTGAGCCAGTAAGAGCTACCACAATGTATAAAA  100

seq1  CTACATAGAAGAAAGAAATAAAAATAAAAGAGACATGTTTCATCTACTTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAGAAGAAAGAAATAAAAATAAAAGAGACATGTTTCATCTACTTA  150

seq1  GTGTTAATTATCTGAAACTGTAGGCATCTAGAACTAAAATTTGGATGATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAATTATCTGAAACTGTAGGCATCTAGAACTAAAATTTGGATGATG  200

seq1  CCAGAATTTTAGCAGGGATAAGCAAAAAGAGCCTCATTGTCTCTGTGATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATTTTAGCAGGGATAAGCAAAAAGAGCCTCATTGTCTCTGTGATA  250

seq1  TTTTTTGTATGTGCAGAAACTGGAAAGGTTGATCTAAAAAGCATTGTGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTATGTGCAGAAACTGGAAAGGTTGATCTAAAAAGCATTGTGCC  300

seq1  AAAAATGAACGAGTTCACAGGTGAGTTTCTCCAACACAGATATCCAAATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAACGAGTTCACAGGTGAGTTTCTCCAACACAGATATCCAAATG  350

seq1  CTATAAATAAATATCTTAGATGTTTCCCTAATATATCATTGATAACAACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAATAAATATCTTAGATGTTTCCCTAATATATCATTGATAACAACA  400

seq1  TAGTCATTTTATTCAATTATTTGTCAGATCAAACTTATTTGATAACTTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATTTTATTCAATTATTTGTCAGATCAAACTTATTTGATAACTTAT  450

seq1  ATATTCAGAATAATCCACAAGATTTACCCTTTTCTAATGGTTGTTTGTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAGAATAATCCACAAGATTTACCCTTTTCTAATGGTTGTTTGTTT  500

seq1  AATGAGGAAGCATCTTTATGTAGCCCTAGCTGTCCTGGATTTCACCATGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGAAGCATCTTTATGTAGCCCTAGCTGTCCTGGATTTCACCATGT  550

seq1  AGATCAGGCTAGTCTCAAACTTATAGAGAGATCCTACTGTTTCTGCCTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGCTAGTCTCAAACTTATAGAGAGATCCTACTGTTTCTGCCTGC  600

seq1  TGCATGCTGGGGCTGAAGATGTAAGCCACCATATCCAGAATAAGACTTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCTGGGGCTGAAGATGTAAGCCACCATATCCAGAATAAGACTTAT  650

seq1  TCTTAATGACAACTCCTGTATCTTTAGGGATACATATTTTTCATTTATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATGACAACTCCTGTATCTTTAGGGATACATATTTTTCATTTATAA  700

seq1  ATATTTCTTGGCTACATGTAAATAGCTAAATTTTAAGTAAGCACATTAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTTGGCTACATGTAAATAGCTAAATTTTAAGTAAGCACATTAAT  750

seq1  AAATAGGAAGCATTTTAGATAACTCAAGATAATGTTTTCCTGTATGGTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGAAGCATTTTAGATAACTCAAGATAATGTTTTCCTGTATGGTCA  800

seq1  GTTTTATAAGTCAGTGTGATTATTATTAGAATTC  833
      ||||||||||||||||||||||||||||||||||
seq2  GTTTTATAAGTCAGTGTGATTATTATTAGAATTC  834