BAC Information

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BAC

Clone NameB6Ng01-238N15
Chromosome11 (Build37)
Map Location 93,922,283 - 93,922,577
singlet/doubletsinglet
Overlap geneSpag9
Upstream geneLOC100039286, Car10, LOC629636, Utp18, Mbtd1, Nme2, Nme1, LOC100039431
Downstream geneLOC100039440, Tob1, Wfikkn2, 3300001P08Rik, Ankrd40, Abcc3, Cacna1g, Spata20, Epn3, Mycbpap, Rsad1, BC018371, Chad, Lrrc59, Eme1, Mrpl27, Xylt2, OTTMUSG00000002038, Cdc34-ps, A430060F13Rik, Tmem92, LOC100039410, LOC544807, LOC544808, LOC665174, LOC432591, LOC100039739, Col1a1, Sgca, Hils1, Ppp1r9b, Samd14, Pdk2, Itga3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238N15.b
ACCGA049440
length872
definitionB6Ng01-238N15.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatacgtatacaattaaagtataaacataaagatactctagatt
tcttttgaaaagccttgatcttgaagattcataatagtagatagaatagg
tagaggtattttaaggtcattaatacagagctttaacagcattgttgaaa
tctagagcttattcgttttactattatttccacaagcatcaaagcatgga
gacagcaccagtaatttaaagaaaatgttctgtgggcttaaaattaaggc
catgcattacttacctcctgtaactatttaataaggagtatctatctact
ggcaaaattctgtacaccattattttcatagcatctccaaagccactaag
attatctttaacattaaaaaaataatcttccgtgtctttaaatctattca
tatttaaaaatcaattctagatattccagaaacaactaaggaatttatat
tttatattgtgttatctcagtgtaattaagaatcagaatatagcccaaaa
cttaggatacccaagatataagatacaatttgctaaacacatgaaactca
agaaaaatgaagactgaagtgtggacactatgcccctccttagaagtggg
aacaaaacacccttggaaggagttacagagacaaagtgtggagctgagat
gaaaggatggaccatctagagactgccatatccagggatccaccccataa
tcagcatccaaacgctgacaccattgcatactctagcaagattttatcga
aaggacccagatgtagctgtctcttgtgagactatgccggggacctagca
aacacagtagtggatgctcacagtcagctatgggatggatcacgggcctc
ccaatggaagagcttgagaaag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_93922283_93922577
seq2: B6Ng01-238N15.b_622_917 (reverse)

seq1  CTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGAC  50
      ||||||| ||||| ||||||||||| || |||||||||||  ||||||||
seq2  CTTTCTCAAGCTCTTCCATTGGGAGGCCCGTGATCCATCCCATAGCTGAC  50

seq1  TGTGAGCATCCACTTCTGTGTTTGCTAGG-CCCCGGCATAGTCTCACAAG  99
      |||||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  TGTGAGCATCCACTACTGTGTTTGCTAGGTCCCCGGCATAGTCTCACAAG  100

seq1  AGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGTATATGCAAT  149
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  AGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGAGTATGCAAT  150

seq1  GGTGTCAGCGTTTGGATGCTGATTATGGGGTGGATCCCTGGATATGGCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCAGCGTTTGGATGCTGATTATGGGGTGGATCCCTGGATATGGCAG  200

seq1  TCTCTACATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTTTGTAA  249
      |||||| ||||||||||||||||||||||||||| ||||||||| |||||
seq2  TCTCTAGATGGTCCATCCTTTCATCTCAGCTCCACACTTTGTCTCTGTAA  250

seq1  CTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGGAGGGGCATAGT  295
      ||||||||| |||||||||||||||| |||||||||||||||||||
seq2  CTCCTTCCAAGGGTGTTTTGTTCCCACTTCTAAGGAGGGGCATAGT  296