BAC Information

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BAC

Clone NameB6Ng01-239P14
Chromosome11 (Build37)
Map Location 38,868,109 - 38,869,212
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC276941
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239P14.bB6Ng01-239P14.g
ACCGA050261GA050262
length1,1011,171
definitionB6Ng01-239P14.b B6Ng01-239P14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatggaagatattcccgcatttcctctctcctattactaatga
aatgtaatagtacattctttactatagcatcctaaacaatgatgaaaata
aaaagtatattataggatttgctcaactgttcatcttatagaaataaaca
tccaagattattgaagtctactgaattccaactatttaattgcaaataat
agtgtgtaaacttagtcttaactgctatgtttatgtcgactaatggtgga
aaagcaagtgaggtatcaaaaattaaaatgacaaaattaaaagtattttc
tatatgattttatctgatatcaaacttcacttacatatctgaaagataag
cattgggtaggacagatgattcagtgtgcaagagtgcttgctgggtaaac
aagagtacatgagttcagacccacagcatccctgtgaaaagtagagtgca
tgatgtatgcatccctaccccaacattgggagtgtgatgtgttataggag
acaaggagagagttaggacttagtggccatccagtgtaggcaaaatagtc
aagatttcagggtctgttagagagtgtttttagggactataccatcatct
ccatgactgtcactcttttgtccccacatttttcacatacacatacattc
actgtgcatgcaaaaacaacaacaacaacaacaacaacaacaacaacaaa
tcaaagagaaattacaatggatagcagtatggtagataaaacaggcatgg
ataatttgaaagtgttctttcatcccttgcattatttaaccctatctatt
tatataaacaatctctcctggatgggttgagcctatccattcaatctatt
tttattatgctcatcatcaatgttgttatgctatagtttacattctactc
ttactcaggaaagtgtgggcagtcatttaatttcttgatgccatttactc
cagaccattctctccttaggaaaggagaaagagaaattatattatattat
taatattatattatagtattccaccaatcctattcctttcatcaaaacag
cgtctttttcagccctcaccttacccaccttaacaatggcgccacaaggc
t

gaattctatagtggctagaaaagtttgtactctgaggagcaatggataaa
tgccctccttgcttgatgtctttgcaagaatgagatgctgtctattttat
taatcttggtcattctgacttgtgtaagatgaaatctcaaagtagttttg
gtttacatatgaatatttttcagccaattaagttactgtttggaggattg
tctgactagacattaccctatttttaattggcttctatggatttttgatg
ttcaggtgttggagtccagctccagtagtgtgctcagtgattcaaggagg
ggatgtagggtcagcgatgacataaagcagccacacattcacacacttgg
tggatgaagtaagactcaaacagctttattttctttcttagcccctttat
accagctaaaataaaaattctctacataaggaaaggattgcctcatagcc
accagttatatattctccaaaaactaacaccatgaaaacatttcattaaa
atcattacacaaagtgaaactgcagcatgatgactggttatatatgcttc
ttggaaaacccacacctaactgaacagttcccatcttttttcctttccac
aaattcatcctaatctaaaggtaataattttttggtcattaattaacaaa
gtttaagcaagtgaaggctgttgtagctatttttcctatgctagatgatg
ttttgtgtttaccaaaaaacaaaaacaaaaacaaacaaaaaaaaacaaaa
aaacccaaatcatatatcttacatctttatttttaaaacttattgcgcta
aacttgctaatcatctattctttattcttatactcacaataacatcattt
aatatttttataactctctcttttcatggtgcacataaaaacctgtgacc
acatccttggatcacaaaaataaagaactcagacccagtccagaatgaat
gggtttatttgatattaacctgtctcaaacctatttttcatctccacaag
tacaactgtgtgtttttaatgtatgagaactcactgtgcttcttctctaa
ctatacagctctcactatctacaggatggagaacaattttggctctgatc
tttctttgttaattgttttctggaaaaacacctaacctatcttcttgtaa
tccttcttattaatccgggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_38868109_38869212
seq2: B6Ng01-239P14.b_48_1148

seq1  GAATTCACATGGAAGATATTCCCGCATTTCCTCTCTCCTATTACTAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGGAAGATATTCCCGCATTTCCTCTCTCCTATTACTAATGA  50

seq1  AATGTAATAGTACATTCTTTACTATAGCATCCTAAACAATGATGAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATAGTACATTCTTTACTATAGCATCCTAAACAATGATGAAAATA  100

seq1  AAAAGTATATTATAGGATTTGCTCAACTGTTCATCTTATAGAAATAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATATTATAGGATTTGCTCAACTGTTCATCTTATAGAAATAAACA  150

seq1  TCCAAGATTATTGAAGTCTACTGAATTCCAACTATTTAATTGCAAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGATTATTGAAGTCTACTGAATTCCAACTATTTAATTGCAAATAAT  200

seq1  AGTGTGTAAACTTAGTCTTAACTGCTATGTTTATGTCGACTAATGGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTAAACTTAGTCTTAACTGCTATGTTTATGTCGACTAATGGTGGA  250

seq1  AAAGCAAGTGAGGTATCAAAAATTAAAATGACAAAATTAAAAGTATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGTGAGGTATCAAAAATTAAAATGACAAAATTAAAAGTATTTTC  300

seq1  TATATGATTTTATCTGATATCAAACTTCACTTACATATCTGAAAGATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATTTTATCTGATATCAAACTTCACTTACATATCTGAAAGATAAG  350

seq1  CATTGGGTAGGACAGATGATTCAGTGTGCAAGAGTGCTTGCTGGGTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGTAGGACAGATGATTCAGTGTGCAAGAGTGCTTGCTGGGTAAAC  400

seq1  AAGAGTACATGAGTTCAGACCCACAGCATCCCTGTGAAAAGTAGAGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTACATGAGTTCAGACCCACAGCATCCCTGTGAAAAGTAGAGTGCA  450

seq1  TGATGTATGCATCCCTACCCCAACATTGGGAGTGTGATGTGTTATAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTATGCATCCCTACCCCAACATTGGGAGTGTGATGTGTTATAGGAG  500

seq1  ACAAGGAGAGAGTTAGGACTTAGTGGCCATCCAGTGTAGGCAAAATAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGAGAGTTAGGACTTAGTGGCCATCCAGTGTAGGCAAAATAGTC  550

seq1  AAGATTTCAGGGTCTGTTAGAGAGTGTTTTTAGGGACTATACCATCATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTCAGGGTCTGTTAGAGAGTGTTTTTAGGGACTATACCATCATCT  600

seq1  CCATGACTGTCACTCTTTTGTCCCCACATTTTTCACATACACATACATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACTGTCACTCTTTTGTCCCCACATTTTTCACATACACATACATTC  650

seq1  ACTGTGCATGCAAAAACAACAACAACAACAACAACAACAACAACAACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCATGCAAAAACAACAACAACAACAACAACAACAACAACAACAAA  700

seq1  TCAAAGAGAAATTACAATGGATAGCAGTATGGTAGATAAAACAGGCATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAGAAATTACAATGGATAGCAGTATGGTAGATAAAACAGGCATGG  750

seq1  ATAATTTGAAAGTGTTCTTTCATCCCTTGCATTATTTAACCCTATCTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTGAAAGTGTTCTTTCATCCCTTGCATTATTTAACCCTATCTATT  800

seq1  TATATAAACAATCTCTCCTGGATGGGTTGAGCCTATCCATTCAATCTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAACAATCTCTCCTGGATGGGTTGAGCCTATCCATTCAATCTATT  850

seq1  TTTATTATGCTCATCATCAATGTTGTTATGCTATAGTTTACATTCTACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATGCTCATCATCAATGTTGTTATGCTATAGTTTACATTCTACTC  900

seq1  TTACTCAGGAAAGTGT-GGCAGTCATTAAATTTCTTGATGCCA-TTACTC  948
      |||||||||||||||| |||||||||| ||||||||||||||| ||||||
seq2  TTACTCAGGAAAGTGTGGGCAGTCATTTAATTTCTTGATGCCATTTACTC  950

seq1  CAGACCATTCTCTCCTTAAGAAAAGGAGAAAGAAGAAATAATAATAATAA  998
      ||||||||||||||||| || ||||||||||| |||||| || || ||| 
seq2  CAGACCATTCTCTCCTT-AGGAAAGGAGAAAG-AGAAATTAT-ATTATAT  997

seq1  TAATAATAATAATAATAATAATAATATCCACCAATCCTA-TCCTTTCATC  1047
      || ||||| ||   || ||| ||   ||||||||||||| ||||||||||
seq2  TATTAATATTA--TATTATAGTA--TTCCACCAATCCTATTCCTTTCATC  1043

seq1  AAAACAGCGTC-TTTTCAAGCCTCACCTTACCCACCTTAAACAATGCGGC  1096
      ||||||||||| ||||||  |||||||||||||||||| |||||||  ||
seq2  AAAACAGCGTCTTTTTCAGCCCTCACCTTACCCACCTT-AACAATGGCGC  1092

seq1  CAC-AGGCT  1104
      ||| |||||
seq2  CACAAGGCT  1101


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