BAC Information

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BAC

Clone NameB6Ng01-241M11
Chromosome11 (Build37)
Map Location 73,197,300 - 73,197,951
singlet/doubletsinglet
Overlap genenone
Upstream geneD130058I21Rik, Ggt6, Mybbp1a, 9830002I17Rik, LOC432577, Ube2g1, Ankfy1, Cyb5d2, Zzef1, LOC627119, Atp2a3, P2rx1, LOC100043309, Camkk1, 1200014J11Rik, Itgae, Gsg2, P2rx5, Tmem93, Tax1bp3, Ctns, Carkl, Trpv1, Trpv3, Aspa, Spata22, Olfr20, Olfr376
Downstream geneOlfr377-ps1, Olfr1, Olfr75-ps1, Olfr378, Olfr379-ps1, Olfr380, Olfr381, Olfr382, Olfr383-ps1, Olfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241M11.bB6Ng01-241M11.g
ACCGA051607GA051608
length871996
definitionB6Ng01-241M11.b B6Ng01-241M11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaactgcaccttatagaaattcagtgctttctggactagtttt
tgaatgccagtggaggcttgtgatctgagtgaagactcgaaataataata
aaaaagactcttttgcaaattgcagcggacttcacaatttctgggctctc
ctgggtttcccaaggactcagggcataacagatctacctgaagactcatt
aatactactcttgggaatatacccaaaagatgccccaccatgccacaggg
gcacttgttccactacgttcataacagtcttgtttgtgatagccagaagc
tggaaacaactcagatgttccaagacagaagaatggatacagaaaatgtg
gttcatttacacaatggaatactacttagatattaagaacaaggaaatca
tgaatttgcaggcaactggatgaaactagaaaatgtcatcctgagtgagg
taacacagacccaaaagcacatgcatggtatgtactcactaacatgtgga
tattagccaaaaaagtagtacagaatatcttagatgcagtccacagaact
caaaaaggtcaacaagctgaagagcccaagtggggatgcttcctttccac
ttgggagggggaagaaagcaatcacaaggggtgagagagggaggaaccag
ggagggaaaggggaagggaggagagagaagatggaacctgatctggtatt
gggtgaggaaaaaggaatgaagccctgaaggctagcagaaagaatggaaa
caggcaaactcaggaggaaggaagttggtgtgtgtgtgtgtgaccctctg
gaatgtaccagacacctgggaagtgagagatcttcagggcccaaagggag
ggaccttagatgaatgcctta
gaattctcatctgaagaataccgaatgacagagaagcacctgaaaaaatg
ttcaacatccttaaccatcagggaaatgcaaatcaaaaaaaccttgagat
tccacctcacacccagtcagaatggctaagatcaaaaactcaggtgacag
cagatgctggcgaggatgtggagaaagagaaacactcctccatttctggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcagttcttc
agaaaattggacatggtactactggaggatcccacaatacctctcctggg
catatatccagaagatgtctcaaccggtaagaaggacgcatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggta
aatggatggacctggagggcatcatcctgagtgacgtaacccaatcacaa
aggaactcatacaatatgtactcactgataagtggatattagcccagaaa
cttaggatacccaagatataagatacaatttgctaaacgcatgaaactca
agaagaacgaagaccaaaatgtggacactttgccccttcttagaattggg
aacaaaacacccattgaaggagttacagagacaaagtttgaagcagtgaa
gaaaggatggaccatctagagacaatatgaaaggggttatatgatggcta
tgaaataatactatcacagaatgatgaagaaaaaaaagagatgaatcata
cctgaaacctatctttcataaacagaaattccaattgattgcaagacact
gggattattttcctgaatgtatccaacactgatgaatctgagtcatagtt
tctgggttcatgctcctgatcacttttattttatttgcagacaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_73197300_73197951
seq2: B6Ng01-241M11.b_48_699

seq1  GAATTCCTAACTGCACCTTATAGAAATTCAGTGCTTTCTGGACTAGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACTGCACCTTATAGAAATTCAGTGCTTTCTGGACTAGTTTT  50

seq1  TGAATGCCAGTGGAGGCTTGTGATCTGAGTGAAGACTCGAAATAATAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCCAGTGGAGGCTTGTGATCTGAGTGAAGACTCGAAATAATAATA  100

seq1  AAAAAGACTCTTTTGCAAATTGCAGCGGACTTCACAATTTCTGGGCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACTCTTTTGCAAATTGCAGCGGACTTCACAATTTCTGGGCTCTC  150

seq1  CTGGGTTTCCCAAGGACTCAGGGCATAACAGATCTACCTGAAGACTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTCCCAAGGACTCAGGGCATAACAGATCTACCTGAAGACTCATT  200

seq1  AATACTACTCTTGGGAATATACCCAAAAGATGCCCCACCATGCCACAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTACTCTTGGGAATATACCCAAAAGATGCCCCACCATGCCACAGGG  250

seq1  GCACTTGTTCCACTACGTTCATAACAGTCTTGTTTGTGATAGCCAGAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGTTCCACTACGTTCATAACAGTCTTGTTTGTGATAGCCAGAAGC  300

seq1  TGGAAACAACTCAGATGTTCCAAGACAGAAGAATGGATACAGAAAATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACAACTCAGATGTTCCAAGACAGAAGAATGGATACAGAAAATGTG  350

seq1  GTTCATTTACACAATGGAATACTACTTAGATATTAAGAACAAGGAAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTACACAATGGAATACTACTTAGATATTAAGAACAAGGAAATCA  400

seq1  TGAATTTGCAGGCAACTGGATGAAACTAGAAAATGTCATCCTGAGTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGCAGGCAACTGGATGAAACTAGAAAATGTCATCCTGAGTGAGG  450

seq1  TAACACAGACCCAAAAGCACATGCATGGTATGTACTCACTAACATGTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGACCCAAAAGCACATGCATGGTATGTACTCACTAACATGTGGA  500

seq1  TATTAGCCAAAAAAGTAGTACAGAATATCTTAGATGCAGTCCACAGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCCAAAAAAGTAGTACAGAATATCTTAGATGCAGTCCACAGAACT  550

seq1  CAAAAAGGTCAACAAGCTGAAGAGCCCAAGTGGGGATGCTTCCTTTCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGGTCAACAAGCTGAAGAGCCCAAGTGGGGATGCTTCCTTTCCAC  600

seq1  TTGGGAGGGGGAAGAAAGCAATCACAAGGGGTGAGAGAGGGAGGAACCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGGGGAAGAAAGCAATCACAAGGGGTGAGAGAGGGAGGAACCAG  650

seq1  GG  652
      ||
seq2  GG  652