BAC Information

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BAC

Clone NameB6Ng01-241O09
Chromosome11 (Build37)
Map Location 26,996,188 - 26,996,977
singlet/doubletsinglet
Overlap genenone
Upstream gene5730522E02Rik, LOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
Downstream geneLOC100042377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241O09.bB6Ng01-241O09.g
ACCGA051695GA051696
length7901,185
definitionB6Ng01-241O09.b B6Ng01-241O09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactggagtgggtatggcagtgatttcctattagtgtttaatacc
tctgtcagattttgagaccctttggttgtcaaggcctcagaatcattgga
ctccaaagctaggacagtccaaacctaggagtaattacctgaagaagttt
cttagttactattataacagcctctgttctggtgtttggtctctactcat
tatgagaatgtgtctacaaacaccagccaatatttacagtgaaaaccagt
aagcatgatttcagtaaaactgaagcccaactcccagtgtccctaaaccc
atttatccaagcctggatcctttatagaatcttccttccccatttgggta
ttacctgagctcatgcagcacatctaaaactggtgtctttaatcgggatt
tctaaatttggaatataatatcaggtctgaggaattcagcagtttctgtg
gctcctcagtgggtggcttagtggagattcataaccagtagcctgaaagt
atccaccattgtatccaccatccttgtttttactgtttagtcatttcttg
tttagcatagtcagcctagccttgggaaatcctttaagctgggctcagta
gggccactaagaatttgaatgccacacaggttttaggaccacttcccctg
tggtcaagtcaggtgcttgtggggaattccctttctggtgccatttctgg
tggacaccctcttggataaccagttagcttctaataagaaattagatcct
gccctgtcccttcccttcccttcccttaccttcccttccc

gaattctcacctggaataccgaatggctgaaaagcacctgaaaaaatgtt
caacatccttaatcatcagggaaatgcaaatcaaagcaaccctgagattc
cacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagcag
atgctggcaaggatatggagaaagaggaacactcctccattgttggtggg
attgcaagcttgtacaaccactctagaaatcagtctggcagttcctcaga
aaattgggcatagtactaccggaggatcccgcattacctctcctgggcat
atatccagaagatgccccaactggtaagaaggacacatgctccactatgt
ttatagcagccttatttataatagccagaagctggaaagaacccagatgt
ccctcaacagaggaatggatacagaaaatgtgatacatttacacaatgga
gtactactcagctattaagaagaatgaatttatgaaattcctaggcaaat
ggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaag
aattcacacaatgtgtactcactgataagtggatattagcccagaaactt
agaatacccaagatataagatacaatttgctaaacgcatgaaactcaaga
caaacaaagaccaaagtgtggacactttgccccttcttagaattgggaac
aaaacacccatggaaggagttacagagacatagtttggagctgagacaaa
aggatggaccatctagaaactgccatatccggagatccatcccataatca
gcttccaaacgctgacaccattgcatacactagcaagattttatcgaaag
gacccagatgtagctgtctcttgagagactatgctggggcctagcaacac
agaagtggatgctcacagtcagctaatggatggatcacaggcccccaatg
gaggcgctagaagaaaggtacccaggagctggggtggtctgcaaccggat
aggtggaacaacattatgagctacccagtaccccctcccccagaagctct
tgactctagatgcatatgtatcagaagaatggccctagtcgccaatcaat
tgaagaagaggtcattgtcttgcaccttaatcgtctcagttacaggagaa
acggagggcccaagaagtgttgagagttggtgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26996188_26996977
seq2: B6Ng01-241O09.b_49_838

seq1  GAATTCACTGGAGTGGGTATGGCAGTGATTTCCTATTAGTGTTTAATACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGAGTGGGTATGGCAGTGATTTCCTATTAGTGTTTAATACC  50

seq1  TCTGTCAGATTTTGAGACCCTTTGGTTGTCAAGGCCTCAGAATCATTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGATTTTGAGACCCTTTGGTTGTCAAGGCCTCAGAATCATTGGA  100

seq1  CTCCAAAGCTAGGACAGTCCAAACCTAGGAGTAATTACCTGAAGAAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAGCTAGGACAGTCCAAACCTAGGAGTAATTACCTGAAGAAGTTT  150

seq1  CTTAGTTACTATTATAACAGCCTCTGTTCTGGTGTTTGGTCTCTACTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTACTATTATAACAGCCTCTGTTCTGGTGTTTGGTCTCTACTCAT  200

seq1  TATGAGAATGTGTCTACAAACACCAGCCAATATTTACAGTGAAAACCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGAATGTGTCTACAAACACCAGCCAATATTTACAGTGAAAACCAGT  250

seq1  AAGCATGATTTCAGTAAAACTGAAGCCCAACTCCCAGTGTCCCTAAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGATTTCAGTAAAACTGAAGCCCAACTCCCAGTGTCCCTAAACCC  300

seq1  ATTTATCCAAGCCTGGATCCTTTATAGAATCTTCCTTCCCCATTTGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCCAAGCCTGGATCCTTTATAGAATCTTCCTTCCCCATTTGGGTA  350

seq1  TTACCTGAGCTCATGCAGCACATCTAAAACTGGTGTCTTTAATCGGGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGAGCTCATGCAGCACATCTAAAACTGGTGTCTTTAATCGGGATT  400

seq1  TCTAAATTTGGAATATAATATCAGGTCTGAGGAATTCAGCAGTTTCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATTTGGAATATAATATCAGGTCTGAGGAATTCAGCAGTTTCTGTG  450

seq1  GCTCCTCAGTGGGTGGCTTAGTGGAGATTCATAACCAGTAGCCTGAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCAGTGGGTGGCTTAGTGGAGATTCATAACCAGTAGCCTGAAAGT  500

seq1  ATCCACCATTGTATCCACCATCCTTGTTTTTACTGTTTAGTCATTTCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCATTGTATCCACCATCCTTGTTTTTACTGTTTAGTCATTTCTTG  550

seq1  TTTAGCATAGTCAGCCTAGCCTTGGGAAATCCTTTAAGCTGGGCTCAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCATAGTCAGCCTAGCCTTGGGAAATCCTTTAAGCTGGGCTCAGTA  600

seq1  GGGCCACTAAGAATTTGAATGCCACACAGGTTTTAGGACCACTTCCCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCACTAAGAATTTGAATGCCACACAGGTTTTAGGACCACTTCCCCTG  650

seq1  TGGTCAAGTCAGGTGCTTGTGGGGAATTCCCTTTCTGGTGCCATTTCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAAGTCAGGTGCTTGTGGGGAATTCCCTTTCTGGTGCCATTTCTGG  700

seq1  TGGACACCCTCTTGGATAACCAGTTAGCTTCTAATAAGAAATTAGATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACCCTCTTGGATAACCAGTTAGCTTCTAATAAGAAATTAGATCCT  750

seq1  GCCCTGTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC  790
      ||||||||||||||||||||||||||| ||||||||||||
seq2  GCCCTGTCCCTTCCCTTCCCTTCCCTTACCTTCCCTTCCC  790


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