BAC Information

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BAC

Clone NameB6Ng01-244D23
Chromosome11 (Build37)
Map Location 68,233,528 - 68,403,676
singlet/doubletdoublet
Overlap genePik3r5, BB220380, BC024997
Upstream geneGas7, Rcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16, Stx8, Ntn1
Downstream geneCcdc42, Myh10, Ndel1, 9930039A11Rik, Rpl26, Odf4, Arhgef15, Slc25a35, 2400006H24Rik, Pfas, 1500010J02Rik, Aurkb, 2310047M10Rik, Tmem107, Vamp2, Per1, Hes7, Aloxe3, Alox12b, Alox8, Gucy2e, Cntrob, Trappc1, Kcnab3, A030009H04Rik, Chd3, Cyb5d1, Lsmd1, Tmem88, Jmjd3, Dnahc2, Efnb3, Wdr79, LOC100043030, Trp53
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244D23.bB6Ng01-244D23.g
ACCGA053430GA053431
length255907
definitionB6Ng01-244D23.b B6Ng01-244D23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,233,528 - 68,233,782)(68,402,765 - 68,403,676)
sequence
ctaaccagcagtcttccctcagcctctgggatggcttggctacaggcatg
catgccactgcaccaactatgtctctgcctgtcataagacttgctgtacc
tgtcactttccctcactgtgaccaaaatagtggaaataacaacttagagg
aaagattaatttggggttatgattttagagtctagtccacagtcctcagt
tttgctgtgaggagggccaacatcgtggcgttgggtgcagggggaggggg
agggt
gaattctgcacgcaggagggatgaggctcagctactgaccctgcctcttc
tttctgcagcatcaggaccagtgcaagtcaaccccttgcacttgaccagg
tgtcaccaggtgtctcttttctcctgtcatgggcccccatgattcctcat
ggatgaacaaggatagtggggacatttaggggggatggagagacgcacca
gatatgtgccctgctccaaagcaccagagaggcccggggaatcccaaatc
agtcatatatgaatcacctagaaagtttttaaacacctataggtgtctgg
tctcaacctgagacctgctagaggcagaagaaggaagaagttaccagcgt
ctgtatttgtgaagagtaccatgagattccacagcttctgacttcctgga
agtcatttggagagtccttcactctcagacttcctgtcctcttcaatact
ccatcaactttgctctggtccaggaggactgtatctcagaacactgacat
ccctgctctgcccagttgtgcatagaatgagggaccttacaagtagggtt
cctccaggagagggcagcagtgagccctccttgcaacagctcccaactcc
tcagacttctctactgctggtcctggagcattgctggccaacaagtctga
gtgaggcttttgtttgtttacattgttatttatttttgtgtatgcacgtt
ttatgcctgtgaacatgcttcagtgccccgcccagagatcagaggaaact
ccggggggagtcattctctttttttttctaacatgcaagtacgtccaggg
tctagcctcagcctctccagccattggcggtaggctcacctacgagccat
cttggcaagctctaatcattctctaagtactgtagagaagggccatcctc
tgagcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_68233528_68233782
seq2: B6Ng01-244D23.b_53_307

seq1  CTAACCAGCAGTCTTCCCTCAGCCTCTGGGATGGCTTGGCTACAGGCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCAGCAGTCTTCCCTCAGCCTCTGGGATGGCTTGGCTACAGGCATG  50

seq1  CATGCCACTGCACCAACTATGTCTCTGCCTGTCATAAGACTTGCTGTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCACTGCACCAACTATGTCTCTGCCTGTCATAAGACTTGCTGTACC  100

seq1  TGTCACTTTCCCTCACTGTGACCAAAATAGTGGAAATAACAACTTAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTTTCCCTCACTGTGACCAAAATAGTGGAAATAACAACTTAGAGG  150

seq1  AAAGATTAATTTGGGGTTATGATTTTAGAGTCTAGTCCACAGTCCTCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTAATTTGGGGTTATGATTTTAGAGTCTAGTCCACAGTCCTCAGT  200

seq1  TTTGCTGTGAGGAGGGCCAACATCGTGGCGTTGGGTGCAGGGGGAGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTGAGGAGGGCCAACATCGTGGCGTTGGGTGCAGGGGGAGGGGG  250

seq1  AGGGT  255
      |||||
seq2  AGGGT  255

seq1: chr11_68402765_68403676
seq2: B6Ng01-244D23.g_68_974 (reverse)

seq1  TGGCTCAGAGGATGGCCCTCTTCATCAGTACTTAGAGGAATGATTTGAGC  50
      |||||||||||||||||||  ||  ||||||||||| |||||||| ||||
seq2  TGGCTCAGAGGATGGCCCTTCTCTACAGTACTTAGA-GAATGATTAGAGC  49

seq1  -TGGCAAGATGGCTCCGTAGGTGAAAGCACTTACCGCCAAT-GCT-GAGA  97
       || |||||||||| |||||||||     | |||||||||| ||| ||||
seq2  TTGCCAAGATGGCT-CGTAGGTGA----GCCTACCGCCAATGGCTGGAGA  94

seq1  GCCTGA-GCTAGACCCCCTGGGACGTACTTGCATGTTAG-AAAAAAAAGA  145
      | |||| |||||||||    ||||||||||||||||||| ||||||||||
seq2  GGCTGAGGCTAGACCC---TGGACGTACTTGCATGTTAGAAAAAAAAAGA  141

seq1  GAATTGACTCCCCCCGAGTTTTCCTCTGATCTCTGGGC-GTGCACTGAAG  194
      ||| ||||||||||||   ||||||||||||||||||| | |||||||||
seq2  GAA-TGACTCCCCCCGGAGTTTCCTCTGATCTCTGGGCGGGGCACTGAAG  190

seq1  CATGTTCACAGGCAT-ACACGTGCATACACAAAAATAAATAACAATGTAA  243
      ||||||||||||||| | ||||||||||||||||||||||||||||||||
seq2  CATGTTCACAGGCATAAAACGTGCATACACAAAAATAAATAACAATGTAA  240

seq1  ACAAAACAAAAGCCTCACTCAGACTTGTTGGCCAGCAATGCTCCAGGACC  293
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AC-AAACAAAAGCCTCACTCAGACTTGTTGGCCAGCAATGCTCCAGGACC  289

seq1  AGCAGTAGAGAAGTCCTGAGGAGTTGGGAGCTGTTGCAAGGAGGGCTCAC  343
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGCAGTAGAGAAGT-CTGAGGAGTTGGGAGCTGTTGCAAGGAGGGCTCAC  338

seq1  TGCTGCCCTCTCCTGGAGGAACCCTACTTGTAAGGTCCCTCATTCTATGC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCCTCTCCTGGAGGAACCCTACTTGTAAGGTCCCTCATTCTATGC  388

seq1  ACAACTGGGCAGAGCAGGGATGTCAGTGTTCTGAGATACAGTCCTCCTGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGGGCAGAGCAGGGATGTCAGTGTTCTGAGATACAGTCCTCCTGG  438

seq1  ACCAGAGCAAAGTTGATGGAGTATTGAAGAGGACAGGAAGTCTGAGAGTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGCAAAGTTGATGGAGTATTGAAGAGGACAGGAAGTCTGAGAGTG  488

seq1  AAGGACTCTCCAAATGACTTCCAGGAAGTCAGAAGCTGTGGAATCTCATG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTCTCCAAATGACTTCCAGGAAGTCAGAAGCTGTGGAATCTCATG  538

seq1  GTACTCTTCACAAATACAGACGCTGGTAACTTCTTCCTTCTTCTGCCTCT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTTCACAAATACAGACGCTGGTAACTTCTTCCTTCTTCTGCCTCT  588

seq1  AGCAGGTCTCAGGTTGAGACCAGACACCTATAGGTGTTTAAAAACTTTCT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTCTCAGGTTGAGACCAGACACCTATAGGTGTTTAAAAACTTTCT  638

seq1  AGGTGATTCATATATGACTGATTTGGGATTCCCCGGGCCTCTCTGGTGCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATTCATATATGACTGATTTGGGATTCCCCGGGCCTCTCTGGTGCT  688

seq1  TTGGAGCAGGGCACATATCTGGTGCGTCTCTCCATCCCCCCTAAATGTCC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCAGGGCACATATCTGGTGCGTCTCTCCATCCCCCCTAAATGTCC  738

seq1  CCACTATCCTTGTTCATCCATGAGGAATCATGGGGGCCCATGACAGGAGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATCCTTGTTCATCCATGAGGAATCATGGGGGCCCATGACAGGAGA  788

seq1  AAAGAGACACCTGGTGACACCTGGTCAAGTGCAAGGGGTTGACTTGCACT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGACACCTGGTGACACCTGGTCAAGTGCAAGGGGTTGACTTGCACT  838

seq1  GGTCCTGATGCTGCAGAAAGAAGAGGCAGGGTCAGTAGCTGAGCCTCATC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGATGCTGCAGAAAGAAGAGGCAGGGTCAGTAGCTGAGCCTCATC  888

seq1  CCTCCTGCGTGCAGAATTC  912
      |||||||||||||||||||
seq2  CCTCCTGCGTGCAGAATTC  907