BAC Information

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BAC

Clone NameB6Ng01-245O18
Chromosome11 (Build37)
Map Location 13,162,156 - 13,320,267
singlet/doubletdoublet
Overlap genenone
Upstream geneCobl, LOC627244
Downstream geneLOC432535
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245O18.bB6Ng01-245O18.g
ACCGA054679GA054680
length1,1011,136
definitionB6Ng01-245O18.b B6Ng01-245O18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,319,172 - 13,320,267)(13,162,156 - 13,163,280)
sequence
gaattcatctttagctttctgaacaccatgtatggatagatgcaacacac
ttttctagcacttttctaattgctgagtagctgtttcctccaaattgata
tgttccctcctgaaagggaggagggaagtttacatgaaacacgaattaca
tgaaattcagagggttcaagaggctccttgaaaattaaagcttcacaaag
acccttgccacagttacaaaagcagttaagtatacaattgccagagagaa
aggcatcttgcactggctgatctccctgcaagctgtgggagtatctattg
agcagaggatctttgatgaggcaggatccatgctgggatggacttcctgg
tgaagcagtgctgcctctgcgtcttccatgcacctgtaactgaagcctta
ctatgtttctctaagtaactccaataaaaactcactagttaatcatacct
gatattgctgtaagagtttgtttgtttttgatctgtctttgatgctcttt
ctggggctagtaggctcttgctcatatctccccagaaagtgtcacataat
actaaacaacttgggaaaattaaatgaaaagtaaatgaacatgtgctatg
tctagaccactgtaatctgtgatcattttaattttttttcctatgggtcg
aactcacctaatttaggaaagaatccataaataccaagaaggaagctctt
caataactaagcacagaaaaacacccacaagatgaaaaataccaatgaaa
ttcccacttatgagtgcttaatggccccagaaatatttaacttcattatc
ttctattccagaaccaggaactatgagcgataccatcttcctatctgttt
caccagtaagaaatgtgagcacacaagttagctgagttaaaacttgttat
atataattaacttccaagcacaattttaaaatcaccatactcacttattc
cacgattagcccaaggaaggccggggtttcactgaaattttcaatccaaa
gagagtctaagtctagtttatgctcagcatctaggtcatttagaggaaag
aatttacggaggttatgagcctgcatatgcccaattgagtgttaagacat
g

gaattcatgggtataaagaatgaaatgaatgattgggtaattgttaatac
cagaaaatttgccagcatatacatccatagatggaaattatgctttagaa
tctcctaggtagttctagagtaactatcaagaaagcactattagcaaatc
atcagtatcttactattggacaggataacttctagaatctaattcaggca
actattaaggaataaaaattctcagaaaaaaatataaatcattctaagaa
ttgtctccagtttctggctgtgtttgaggtcagatttcatttgcaggagc
aaaatcaatggcctcacaataggctcaggtgaccggacactgtagtcagt
taactgaagaaaattggggaaattggattatgaactttgaagattttgaa
agttgaaatatggtccaagttgtatatatctctatcttcttatgtaaata
tttccgttctaaggttattgtgtagtcatcacaagagtaccttttgtgct
attcagtatactgggattttatttgaaattgctacagaaaggcttgtaga
tgagtagatgaaagagcataccatgcaatcctaggaacctgagtttgatc
ccaggatccacataaaggtgaaagaagagaaacaacaccataaaattgtg
ctctgagttacaaatatatgtacacgcacacacacacacacacacacaca
cacacacacacacacacacaagcaaataaataaaaatgtaaagggatata
ttgccatacacattgaattcggacctaataactcttatcttcactccata
gcttatttcattgccctatatttctctgcactgtttatttctgctgaagt
ctttggtccctcattttctccatgtccctgcagtgttccattaggaatgc
atgttcatgaatcttccccacgctggctccccttatgatctttcttcttg
agaaacaatatggctgatgtgtgttcctgaagagagagggctggaacaga
gattactttatcttctcaatccctttccaatagatttcttcatcttactg
aagaataataatggcttcttcttgttcttcccttatacctaaatcacaat
aatggccccaagatgatgagcagcctattccttcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_13319172_13320267
seq2: B6Ng01-245O18.b_51_1151 (reverse)

seq1  CATGTCT--ACACTCAA-TGGGCATTATGCAGGCTCCTTAACCTCTGTAA  47
      |||||||  |||||||| |||||| |||||||||| | ||||||| ||||
seq2  CATGTCTTAACACTCAATTGGGCA-TATGCAGGCT-CATAACCTCCGTAA  48

seq1  ATTCTTTCCTCTAAATGACCTAGATGCTTGAGCATTAACTAGACTTAGAC  97
      ||||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  ATTCTTTCCTCTAAATGACCTAGATGC-TGAGCATAAACTAGACTTAGAC  97

seq1  TCTCTTTGGATTGAAAA-TTCAGTGAAA-CCCGGCCTTCCTT-GGCTATT  144
      ||||||||||||||||| |||||||||| ||||||||||||| ||||| |
seq2  TCTCTTTGGATTGAAAATTTCAGTGAAACCCCGGCCTTCCTTGGGCTAAT  147

seq1  CGTGGAATAAGTGAGTAT-GTGATTTTAAAATTGTGCTTGG-AGTTAATT  192
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  CGTGGAATAAGTGAGTATGGTGATTTTAAAATTGTGCTTGGAAGTTAATT  197

seq1  ATATATAACAAGTTTTAACTCAGCTAACTTGTGTGCTCACATTTCTTACT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAACAAGTTTTAACTCAGCTAACTTGTGTGCTCACATTTCTTACT  247

seq1  GGTGAAACAGATAGGAAGATGGTATCGCTCATAGTTCCTGGTTCTGGAAT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAACAGATAGGAAGATGGTATCGCTCATAGTTCCTGGTTCTGGAAT  297

seq1  AGAAGATAATGAAGTTAAATATTTCTGGGGCCATTAAGCACTCATAAGTG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATAATGAAGTTAAATATTTCTGGGGCCATTAAGCACTCATAAGTG  347

seq1  GGAATTTCATTGGTATTTTTCATCTTGTGGGTGTTTTTCTGTGCTTAGTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTCATTGGTATTTTTCATCTTGTGGGTGTTTTTCTGTGCTTAGTT  397

seq1  ATTGAAGAGCTTCCTTCTTGGTATTTATGGATTCTTTCCTAAATTAGGTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGAGCTTCCTTCTTGGTATTTATGGATTCTTTCCTAAATTAGGTG  447

seq1  AGTTCGACCCATAGGAAAAAAAATTAAAATGATCACAGATTACAGTGGTC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGACCCATAGGAAAAAAAATTAAAATGATCACAGATTACAGTGGTC  497

seq1  TAGACATAGCACATGTTCATTTACTTTTCATTTAATTTTCCCAAGTTGTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATAGCACATGTTCATTTACTTTTCATTTAATTTTCCCAAGTTGTT  547

seq1  TAGTATTATGTGACACTTTCTGGGGAGATATGAGCAAGAGCCTACTAGCC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTATGTGACACTTTCTGGGGAGATATGAGCAAGAGCCTACTAGCC  597

seq1  CCAGAAAGAGCATCAAAGACAGATCAAAAACAAACAAACTCTTACAGCAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAGAGCATCAAAGACAGATCAAAAACAAACAAACTCTTACAGCAA  647

seq1  TATCAGGTATGATTAACTAGTGAGTTTTTATTGGAGTTACTTAGAGAAAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGTATGATTAACTAGTGAGTTTTTATTGGAGTTACTTAGAGAAAC  697

seq1  ATAGTAAGGCTTCAGTTACAGGTGCATGGAAGACGCAGAGGCAGCACTGC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAGGCTTCAGTTACAGGTGCATGGAAGACGCAGAGGCAGCACTGC  747

seq1  TTCACCAGGAAGTCCATCCCAGCATGGATCCTGCCTCATCAAAGATCCTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCAGGAAGTCCATCCCAGCATGGATCCTGCCTCATCAAAGATCCTC  797

seq1  TGCTCAATAGATACTCCCACAGCTTGCAGGGAGATCAGCCAGTGCAAGAT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAATAGATACTCCCACAGCTTGCAGGGAGATCAGCCAGTGCAAGAT  847

seq1  GCCTTTCTCTCTGGCAATTGTATACTTAACTGCTTTTGTAACTGTGGCAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCTCTCTGGCAATTGTATACTTAACTGCTTTTGTAACTGTGGCAA  897

seq1  GGGTCTTTGTGAAGCTTTAATTTTCAAGGAGCCTCTTGAACCCTCTGAAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTTGTGAAGCTTTAATTTTCAAGGAGCCTCTTGAACCCTCTGAAT  947

seq1  TTCATGTAATTCGTGTTTCATGTAAACTTCCCTCCTCCCTTTCAGGAGGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTAATTCGTGTTTCATGTAAACTTCCCTCCTCCCTTTCAGGAGGG  997

seq1  AACATATCAATTTGGAGGAAACAGCTACTCAGCAATTAGAAAAGTGCTAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATCAATTTGGAGGAAACAGCTACTCAGCAATTAGAAAAGTGCTAG  1047

seq1  AAAAGTGTGTTGCATCTATCCATACATGGTGTTCAGAAAGCTAAAGATGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGTGTTGCATCTATCCATACATGGTGTTCAGAAAGCTAAAGATGA  1097

seq1  ATTC  1096
      ||||
seq2  ATTC  1101


seq1: chr11_13162156_13163280
seq2: B6Ng01-245O18.g_67_1202

seq1  GAATTCATGGGTATAAAGAATGAAATGAATGATTGGGTAATTGTTAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGGTATAAAGAATGAAATGAATGATTGGGTAATTGTTAATAC  50

seq1  CAGAAAATTTGCCAGCATATACATCCATAGATGGAAATTATGCTTTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATTTGCCAGCATATACATCCATAGATGGAAATTATGCTTTAGAA  100

seq1  TCTCCTAGGTAGTTCTAGAGTAACTATCAAGAAAGCACTATTAGCAAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAGGTAGTTCTAGAGTAACTATCAAGAAAGCACTATTAGCAAATC  150

seq1  ATCAGTATCTTACTATTGGACAGGATAACTTCTAGAATCTAATTCAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTATCTTACTATTGGACAGGATAACTTCTAGAATCTAATTCAGGCA  200

seq1  ACTATTAAGGAATAAAAATTCTCAGAAAAAAATATAAATCATTCTAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAAGGAATAAAAATTCTCAGAAAAAAATATAAATCATTCTAAGAA  250

seq1  TTGTCTCCAGTTTCTGGCTGTGTTTGAGGTCAGATTTCATTTGCAGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCCAGTTTCTGGCTGTGTTTGAGGTCAGATTTCATTTGCAGGAGC  300

seq1  AAAATCAATGGCCTCACAATAGGCTCAGGTGACCGGACACTGTAGTCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAATGGCCTCACAATAGGCTCAGGTGACCGGACACTGTAGTCAGT  350

seq1  TAACTGAAGAAAATTGGGGAAATTGGATTATGAACTTTGAAGATTTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAAGAAAATTGGGGAAATTGGATTATGAACTTTGAAGATTTTGAA  400

seq1  AGTTGAAATATGGTCCAAGTTGTATATATCTCTATCTTCTTATGTAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAATATGGTCCAAGTTGTATATATCTCTATCTTCTTATGTAAATA  450

seq1  TTTCCGTTCTAAGGTTATTGTGTAGTCATCACAAGAGTACCTTTTGTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGTTCTAAGGTTATTGTGTAGTCATCACAAGAGTACCTTTTGTGCT  500

seq1  ATTCAGTATACTGGGATTTTATTTGAAATTGCTACAGAAAGGCTTGTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTATACTGGGATTTTATTTGAAATTGCTACAGAAAGGCTTGTAGA  550

seq1  TGAGTAGATGAAAGAGCATACCATGCAATCCTAGGAACCTGAGTTTGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAGATGAAAGAGCATACCATGCAATCCTAGGAACCTGAGTTTGATC  600

seq1  CCAGGATCCACATAAAGGTGAAAGAAGAGAAACAACACCATAAAATTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATCCACATAAAGGTGAAAGAAGAGAAACAACACCATAAAATTGTG  650

seq1  CTCTGAGTTACAAATATATGTACACGCACACACACACACACACACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTTACAAATATATGTACACGCACACACACACACACACACACACA  700

seq1  CACACACACACACACACACAAGCAAATAAATAAAAATGTAAAGGGATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACAAGCAAATAAATAAAAATGTAAAGGGATATA  750

seq1  TTGCCATACACATTGAATTCGGACCTAATAACTCTTATCTTCACTCCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATACACATTGAATTCGGACCTAATAACTCTTATCTTCACTCCATA  800

seq1  GCTTATTTCATTGCCCTATATTTCTCTGCACTGTTTATTTCTGCTGAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTTCATTGCCCTATATTTCTCTGCACTGTTTATTTCTGCTGAAGT  850

seq1  CTTTGGTCCCTCATTTTCTCCATGTCCCTGCAGTGTTCCATTAGGAATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTCCCTCATTTTCTCCATGTCCCTGCAGTGTTCCATTAGGAATGC  900

seq1  ATGTTCATGAATCTTCCCCACGCTGGCTCCCCTTATGATCTTTCTTCTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATGAATCTTCCCCACGCTGGCTCCCCTTATGATCTTTCTTCTTG  950

seq1  AGAAACAATATGGCTGATGTGTGTTCCTGAAGAGAAGAGGGCTGG-ACAG  999
      |||||||||||||||||||||||||||||||||| |||||||||| ||||
seq2  AGAAACAATATGGCTGATGTGTGTTCCTGAAGAG-AGAGGGCTGGAACAG  999

seq1  AGATTACTTTATCTCTTCAAATCCTTTCC-ATAGA-TTCTTCATCTTACT  1047
      ||||||||||||||  ||||  ||||||| ||||| ||||||||||||||
seq2  AGATTACTTTATCTTCTCAATCCCTTTCCAATAGATTTCTTCATCTTACT  1049

seq1  GAAGA--TATAATGG-TTCT--CTGTTCTTCCCTTATACCT-AATCAC-A  1090
      |||||   ||||||| ||||   |||||||||||||||||| |||||| |
seq2  GAAGAATAATAATGGCTTCTTCTTGTTCTTCCCTTATACCTAAATCACAA  1099

seq1  TAAT-GCCCCAAGATGATGAGCAGCTTATT-CTTCTA  1125
      |||| |||||||||||||||||||| |||| ||||||
seq2  TAATGGCCCCAAGATGATGAGCAGCCTATTCCTTCTA  1136


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