BAC Information

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BAC

Clone NameB6Ng01-246N04
Chromosome11 (Build37)
Map Location 12,479,974 - 12,481,062
singlet/doubletsinglet
Overlap genenone
Upstream geneIkzf1, Fignl1, Ddc, Grb10, Cobl
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246N04.bB6Ng01-246N04.g
ACCGA055330GA055331
length1,1001,108
definitionB6Ng01-246N04.b B6Ng01-246N04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttaaattaagatcaaaaagtacacaaaggcaaaatgaatatt
cagatctatacagtttgcattttactaaaataatatacggaaaataccca
catgcattcaaaagaaaaggctattttatttatccagaattagcccctga
aaccttctaatcataagccagcacacttgctatctggcacgggtgtggac
aatattaacataggcacaaaaagaagtcacaacctaaataaaaaaaagac
tggtcaagttcatttgaaaaataagctttcaggttaaagccttccagtgc
ataaagggagacgtagaggattatgcagacactagaggaaagaaaatccc
ctgtattattattttcgttttaatattttcagataaggaatgaaagatcg
taaatcaataaatctgcaatgaatacatgaatgtaggctaaaggcatcta
ttattttgcacaacatccattcatattggccccaaagaaggaattctttc
agatctaaatgtcagcatcagtcatgcctcttatactgcagactgtgggg
tcttataatggattgcttttatcctgtaccaaaggagaagcaccagttat
atgttggaaggtgggagccacggttctgtggacaactgtcagagagaaat
aagcaggtccctgcctgttccatggtttctctctgcctatgcaaagctca
cctttttgtgtttgcttgtttgtgacagggtcttgctctatagcccagga
tggctttgaactcctgatcatctggagctagtgttgggataaccggtatg
tactagcctgcttttatcatatttattgaagaaattgttacaaacagtgc
taatgaatttctctatatgtctttctatttatgtatctatgatatacatc
ttggtgggggcacatacatagaaacaagaataataaatagaaacaggaga
gctgaggtgtacatgaagttttaagtttaagtcatactattatcttagaa
atgggccatacttagtcttaagggcatgcaaaatatcagcttctcagatg
tggggttattggtggctttgcacatgaacccttggttgagcaagcagaac


gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcgggtcctca
caaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaaatggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatgcccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggagggagttacagagacaaagtttggagctgagatga
aagggatggaccatgtagagactgccttatccagggatccaccccatgat
cagcatccaggcgctgacaccattgcatacactagcaagatcttattgaa
aggacccagatgtagctgtcttctttgtgagactagggccgggccctagc
ggacacagaaggtggatgcctcacagtcagctggtggatggatcacaggg
cttccaatggaaggagctgggagaggagtacctaggagctgaggggatct
gcatccctatagggtggatcaacattgtgaactaaccagtaccccgggag
cttcttgactcctagcctgcatatgtatcaaaaggaaagggcctatatct
gggccatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12479974_12481062
seq2: B6Ng01-246N04.b_46_1145

seq1  GAATTCACTTAAATTAAGATCAAAAAGTACACAAAGGCAAAATGAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTAAATTAAGATCAAAAAGTACACAAAGGCAAAATGAATATT  50

seq1  CAGATCTATACAGTTTGCATTTTACTAAAATAATATACGGAAAATACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTATACAGTTTGCATTTTACTAAAATAATATACGGAAAATACCCA  100

seq1  CATGCATTCAAAAGAAAAGGCTATTTTATTTATCCAGAATTAGCCCCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATTCAAAAGAAAAGGCTATTTTATTTATCCAGAATTAGCCCCTGA  150

seq1  AACCTTCTAATCATAAGCCAGCACACTTGCTATCTGGCACGGGTGTGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCTAATCATAAGCCAGCACACTTGCTATCTGGCACGGGTGTGGAC  200

seq1  AATATTAACATAGGCACAAAAAGAAGTCACAACCTAAATAAAAAAAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAACATAGGCACAAAAAGAAGTCACAACCTAAATAAAAAAAAGAC  250

seq1  TGGTCAAGTTCATTTGAAAAATAAGCTTTCAGGTTAAAGCCTTCCAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAAGTTCATTTGAAAAATAAGCTTTCAGGTTAAAGCCTTCCAGTGC  300

seq1  ATAAAGGGAGACGTAGAGGATTATGCAGACACTAGAGGAAAGAAAATCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGGAGACGTAGAGGATTATGCAGACACTAGAGGAAAGAAAATCCC  350

seq1  CTGTATTATTATTTTCGTTTTAATATTTTCAGATAAGGAATGAAAGATCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTATTATTTTCGTTTTAATATTTTCAGATAAGGAATGAAAGATCG  400

seq1  TAAATCAATAAATCTGCAATGAATACATGAATGTAGGCTAAAGGCATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAATAAATCTGCAATGAATACATGAATGTAGGCTAAAGGCATCTA  450

seq1  TTATTTTGCACAACATCCATTCATATTGGCCCCAAAGAAGGAATTCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGCACAACATCCATTCATATTGGCCCCAAAGAAGGAATTCTTTC  500

seq1  AGATCTAAATGTCAGCATCAGTCATGCCTCTTATACTGCAGACTGTGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTAAATGTCAGCATCAGTCATGCCTCTTATACTGCAGACTGTGGGG  550

seq1  TCTTATAATGGATTGCTTTTATCCTGTACCAAAGGAGAAGCACCAGTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAATGGATTGCTTTTATCCTGTACCAAAGGAGAAGCACCAGTTAT  600

seq1  ATGTTGGAAGGTGGGAGCCACGGTTCTGTGGACAACTGTCAGAGAGAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGAAGGTGGGAGCCACGGTTCTGTGGACAACTGTCAGAGAGAAAT  650

seq1  AAGCAGGTCCCTGCCTGTTCCATGGTTTCTCTCTGCCTATGCAAAGCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGTCCCTGCCTGTTCCATGGTTTCTCTCTGCCTATGCAAAGCTCA  700

seq1  CCTTTTTGTGTTTGCTTGTTTGTGACAGGGTCTTGCTCTATAGCCCAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTGTGTTTGCTTGTTTGTGACAGGGTCTTGCTCTATAGCCCAGGA  750

seq1  TGGCTTTGAACTCCTGATCATCTGGAGCTAGTGTTGGGATAACCGGTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTGAACTCCTGATCATCTGGAGCTAGTGTTGGGATAACCGGTATG  800

seq1  TACTAGCCTGCTTTTATCATATTTATTGAAGAAATTGTTACAAACAGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGCCTGCTTTTATCATATTTATTGAAGAAATTGTTACAAACAGTGC  850

seq1  TAATGAATTTCTCTATATGTCTTTCTATTTATGTATCTATGATATACATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAATTTCTCTATATGTCTTTCTATTTATGTATCTATGATATACATC  900

seq1  TTGGT-GGGGCACATACATAGAAACAAGAATAATAAATAGAAACA-GAGA  948
      ||||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTGGTGGGGGCACATACATAGAAACAAGAATAATAAATAGAAACAGGAGA  950

seq1  GCTGAGGTGTACATGAAGTTTTAAGTTT-AGTCATACTA-TATCTTAGAA  996
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  GCTGAGGTGTACATGAAGTTTTAAGTTTAAGTCATACTATTATCTTAGAA  1000

seq1  AT-GGCCATACTTAGGTCTT-AGGGCATGCAAAATATCAGCTTCTCAGAT  1044
      || ||||||||||| ||||| |||||||||||||||||||||||||||||
seq2  ATGGGCCATACTTA-GTCTTAAGGGCATGCAAAATATCAGCTTCTCAGAT  1049

seq1  GTGGG--TAT--GTGGCCTTTGCACATG-ACCCT--GGTGAGCAAGCAGA  1087
      |||||  |||  |||| ||||||||||| |||||  | ||||||||||||
seq2  GTGGGGTTATTGGTGG-CTTTGCACATGAACCCTTGGTTGAGCAAGCAGA  1098

seq1  AC  1089
      ||
seq2  AC  1100


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