BAC Information

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BAC

Clone NameB6Ng01-247O04
Chromosome11 (Build37)
Map Location 15,474,983 - 15,476,127
singlet/doubletsinglet
Overlap genenone
Upstream gene1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673, LOC432537
Downstream geneLOC665660, Vstm2, Sec61g, Akt2-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247O04.bB6Ng01-247O04.g
ACCGA056106GA056107
length1,1421,166
definitionB6Ng01-247O04.b B6Ng01-247O04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggactgtatcttgggtatttagtacctttaaaaatttttat
tttgggtagtattcacttagtagtgagtaaatgccacgcatgtctttttg
aacctgatttagctcactcaggataatattttctagttccatccatttgc
ctgcaaacgtcaggttttccttgttcttaacagctgagtagtattctatt
gggtaaaggaagttggactcatttcaagtgctgcctgcctagattattat
ctatggaatagaaattttagcacaatatctcatcaatgattgatgcagaa
ggaacaaatgatctattagaagcttctatcctaatgtcaagtgaagaaca
gagaggtagaggggtctggaattcaaggtccaaaacaggttcagatggga
tccaatttaggtttcagtcactgatgttttcagccaaaaaccaccaagtg
gtagattatgagtcaggcaaaaattattttcttttgaaactggcttggaa
gtttgtatatgatcacagagtgtttggggtgttgattaaaaactacccac
aggtttttcagaaattgaatgttaaaattattttttaaaaatcccatatt
tttgaataaaatcactaacagatcctaactgattcatgaacatagagttt
taaattaaataaataggtgtttgcacaaaagtagtgaaaggactggtttt
tatccttttttttttattcttgtacattgtctcactgtctgataatagag
tacagtcctggctgacctcaaacttacaatccatgggcatagccctctca
aatgctaagattacaccactgtgccacaacataagatgagcccttgtttt
taaatatggtcttggtgaatcttggtgccattagggaaattttcatataa
taagtatcctatcaggtactaaacacatagatcagtttctaagcaaaaca
ttacgttttaaaatcattataaaataaattttgaatgtggccacttgaat
tagatttacttagaaatatgagtagaaagacaaaaattgaatgtacatca
ggaggatcatttggaaaggaactgttgagttcaatatacaagttattacc
aatgggacatctattttagtcctgaacatagtaagcttgaga

gaattcatcttggaaaattttacctttgataagtatgaagggacctcctt
ttttttttgtttgtttgatgaatttgggttagaagtcgattttattcaac
attagaatggctacttcagcttgtttcttgtgaccatatgcttgaaaaat
tgttttccagccttttaccctgaggtaatgtctgcctttttccctgaggt
gggtttcatttaagcagcaaaaagttgtgtcctatttatggagccattct
gtctatgtctttttatttgggaattgattccatttatattaagagatatt
aaagaaaagtaattgttgcttcctgttattttggtgttagagttgggatt
ctgttcttgtggccatcttcttttaggtttgttgaaggattactttcttg
attttcttggacatattttctgtccttgtgttggtgtttccctttattat
cctttgaagggatggagttgtggaaagatattgtgtgaatttggttttgt
catggaatactttggtttctccatctatggtaattgagagttttgcttgg
tattgtagcctagacctgcatttgtgttctcttagtgtctgtataacatc
tgtccaggctcttctggctttcatagtctctggtgaaaagtctggtgtaa
ttctaataggtctgcctttatatgttacttgaccttttccccttcctgct
tttaatattctgtcttcatttagtgcatttgttgatctgattattaattg
gtcttggtttctgttactaagtttttttcatttgcctttcaccatctagt
aatctctggtgcagatgtttctagctgactctggctggagtttgttcatc
tttgtgattctttagcctctgtcagcatttccttgggagaccaactcttc
tcctgagtcccagtgggtcagagtgcttctcttgcaggttcatctcttcc
tcttgctggaaaaggttgcccagaagtctgcaagctcagatccacctcct
tgatttctgggggtcagagccccttccctgaaagcttgacttctccttct
ggcaagaaaggtgtcttaggggttcttggatctcagttccgttcctctgg
gtaaaggatgatgtccttgaaggaaacctgttccagatttggtagtgcct
ctctaaccgtgctcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_15474983_15476127
seq2: B6Ng01-247O04.b_47_1188

seq1  GAATTCTTTGGACTGTATCTTGGGTATTTAGTACCTTTAAAAATTTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGACTGTATCTTGGGTATTTAGTACCTTTAAAAATTTTTAT  50

seq1  TTTGGGTAGTATTCACTTAGTAGTGAGTAAATGCCACGCATGTCTTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTAGTATTCACTTAGTAGTGAGTAAATGCCACGCATGTCTTTTTG  100

seq1  AACCTGATTTAGCTCACTCAGGATAATATTTTCTAGTTCCATCCATTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGATTTAGCTCACTCAGGATAATATTTTCTAGTTCCATCCATTTGC  150

seq1  CTGCAAACGTCAGGTTTTCCTTGTTCTTAACAGCTGAGTAGTATTCTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAACGTCAGGTTTTCCTTGTTCTTAACAGCTGAGTAGTATTCTATT  200

seq1  GGGTAAAGGAAGTTGGACTCATTTCAAGTGCTGCCTGCCTAGATTATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAGGAAGTTGGACTCATTTCAAGTGCTGCCTGCCTAGATTATTAT  250

seq1  CTATGGAATAGAAATTTTAGCACAATATCTCATCAATGATTGATGCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGAATAGAAATTTTAGCACAATATCTCATCAATGATTGATGCAGAA  300

seq1  GGAACAAATGATCTATTAGAAGCTTCTATCCTAATGTCAAGTGAAGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAATGATCTATTAGAAGCTTCTATCCTAATGTCAAGTGAAGAACA  350

seq1  GAGAGGTAGAGGGGTCTGGAATTCAAGGTCCAAAACAGGTTCAGATGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTAGAGGGGTCTGGAATTCAAGGTCCAAAACAGGTTCAGATGGGA  400

seq1  TCCAATTTAGGTTTCAGTCACTGATGTTTTCAGCCAAAAACCACCAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTTAGGTTTCAGTCACTGATGTTTTCAGCCAAAAACCACCAAGTG  450

seq1  GTAGATTATGAGTCAGGCAAAAATTATTTTCTTTTGAAACTGGCTTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTATGAGTCAGGCAAAAATTATTTTCTTTTGAAACTGGCTTGGAA  500

seq1  GTTTGTATATGATCACAGAGTGTTTGGGGTGTTGATTAAAAACTACCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTATATGATCACAGAGTGTTTGGGGTGTTGATTAAAAACTACCCAC  550

seq1  AGGTTTTTCAGAAATTGAATGTTAAAATTATTTTTTAAAAATCCCATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTTCAGAAATTGAATGTTAAAATTATTTTTTAAAAATCCCATATT  600

seq1  TTTGAATAAAATCACTAACAGATCCTAACTGATTCATGAACATAGAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATAAAATCACTAACAGATCCTAACTGATTCATGAACATAGAGTTT  650

seq1  TAAATTAAATAAATAGGTGTTTGCACAAAAGTAGTGAAAGGACTGGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAATAAATAGGTGTTTGCACAAAAGTAGTGAAAGGACTGGTTTT  700

seq1  TATCCTTTTTTTTTTATTCTTGTACATTGTCTCACTGTCTGATAATAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTTTTTTTTTATTCTTGTACATTGTCTCACTGTCTGATAATAGAG  750

seq1  TACAGTCCTGGCTGACCTCAAACTTACAATCCATGGGCATAGCCCTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCCTGGCTGACCTCAAACTTACAATCCATGGGCATAGCCCTCTCA  800

seq1  AATGCTAAGATTACACCACTGTGCCACAACATAAGATGAGCCCTTGTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAAGATTACACCACTGTGCCACAACATAAGATGAGCCCTTGTTTT  850

seq1  TAAATATGGTCTTGGTGAATCTTGGTGCCATTA-GGAAATTTTCATATAA  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAAATATGGTCTTGGTGAATCTTGGTGCCATTAGGGAAATTTTCATATAA  900

seq1  TAAGTATCCTATCAGGTACTAAACACATAGATCAGTTTCTAAGCAAAACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATCCTATCAGGTACTAAACACATAGATCAGTTTCTAAGCAAAACA  950

seq1  TTACGTTTTAAAATCATTATAAAATAAAATTTTGAATGTGGCCACTTGAA  999
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTACGTTTTAAAATCATTATAAAAT-AAATTTTGAATGTGGCCACTTGAA  999

seq1  TTAGATTTACTTAGAAATTATGAGTAGAAAGACAAAAA-TGAATGTAACC  1048
      ||||||||||||||||| |||||||||||||||||||| ||||||||  |
seq2  TTAGATTTACTTAGAAA-TATGAGTAGAAAGACAAAAATTGAATGTA--C  1046

seq1  ATCAGGAGGATCATTTG--AAAGAACTGTTGAAGTTTAATATACAAATTA  1096
      |||||||||||||||||  || ||||||||| |||| ||||||||| |||
seq2  ATCAGGAGGATCATTTGGAAAGGAACTGTTG-AGTTCAATATACAAGTTA  1095

seq1  TTTACCAAATGGGACATCTAATTTTAAT-CTGAGCAATAGTAAGC-TGAG  1144
       ||||| |||||||||||| |||||| | |||| | ||||||||| ||||
seq2  -TTACC-AATGGGACATCT-ATTTTAGTCCTGAAC-ATAGTAAGCTTGAG  1141

seq1  A  1145
      |
seq2  A  1142


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