BAC Information

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BAC

Clone NameB6Ng01-248M12
Chromosome11 (Build37)
Map Location 26,045,144 - 26,046,310
singlet/doubletsinglet
Overlap gene5730522E02Rik
Upstream geneLOC100042328
Downstream geneLOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248M12.b
ACCGA056772
length1,169
definitionB6Ng01-248M12.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacctaagattacctttgcattatccatgcaatgatcccatacc
taatgtatgagtatgttaatggctttgtgttcaaggtatgttctgaatac
aaccacttgctgtaatttcctcgaccactgtgtcccatgttttttttttt
tttttttttttttgcctcagctagaccacagtgtctttctttctcttggg
ctctaatccttgatctcttgttcttaaaaaagtaattcattcacaattta
gattatccatgaatttaagaagaggcagacagcaacacaggagaggatag
cgggaggagggagaatgatgtaaacagcacatataaatgcacgtcaaaat
aattaggaatataaacactcaggccatttcatttctttcctatgccatca
cagactgctaagtccttactgtggcctgcctctctctcttctgccctccc
tcatcatttctgctccctgattttctcctctctgttgttgttgaacacac
acttgctgtctcctcagaatctagacctgcaatgttctgtcttctaatgc
atgggttttgtgccttctaggttttgctcagatttgaattcacatgagag
gattttcgaacagtaacagtcttctgattgtgctgctttagattttaatg
agtagaaagttttccatctctaataattttactttaccatctctcattcc
tcttcctgtcactttctatctctgattatcaaagtagttaagaagagaaa
ttttcacttgtgtttatccaaaaggtgattgtcagttgaatgtttcatta
ctcgtccacccagcagagccacacacacaggcttaagtaaaacctgttct
aattagaagaaccaagcaattgtgacaatgggaaggaaaacattcccagt
tatagaaatgcatttttcttatatcaccttagggagggaggcaagtcatc
gtattttaaaattaaagggatattttcaacataaaagggaaattcattag
attcttaggattgcctaaaagcacacacacatacctcaggaactgtgtgt
acctcttagccatctagaatcatcaaacatatttctacagtttgtgtgta
taaggacagttaaccggaataaaatcaaaccaaccaatttcgtcatcggt
tctcccattccctttcctt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26045144_26046310
seq2: B6Ng01-248M12.b_46_1214 (reverse)

seq1  AAGGGAAGGGAA-GGGAGAACGAATGAACGAAATATTGGTTTGGTTTGGT  49
      |||| ||||||| ||||||||  ||| |||||  ||||| |||||||| |
seq2  AAGGAAAGGGAATGGGAGAACCGATG-ACGAA--ATTGG-TTGGTTTGAT  46

seq1  TTTTTTATTTCCGTTTTACTGTTCTTAT--ACACAAAATGTAGAAAATAT  97
      |||     ||||| || ||||| |||||  ||||||| ||||| ||||||
seq2  TTT----ATTCCGGTTAACTGTCCTTATACACACAAACTGTAG-AAATAT  91

seq1  GTTTGATGA-TCTAGGAATGGCT-AGAG---TACACAGTT-CTGAGTTAT  141
      ||||||||| |||||  |||||| ||||    |||||||| ||||| || 
seq2  GTTTGATGATTCTAG--ATGGCTAAGAGGTACACACAGTTCCTGAGGTA-  138

seq1  TGTTTGTTTTGTTGTGCTTTTA-GCAATTCTA--GATCTAATGA--TTTC  186
      ||| ||      |||||||||| ||||| |||   |||||||||  || |
seq2  TGTGTG------TGTGCTTTTAGGCAATCCTAAGAATCTAATGAATTTCC  182

seq1  CTTTTATGTTG--AATATCCTTTTATTTTTAAAATAACGAATGACTTG-C  233
      |||||||||||  ||||||| |||| ||||||||| ||| |||||||| |
seq2  CTTTTATGTTGAAAATATCCCTTTAATTTTAAAAT-ACG-ATGACTTGCC  230

seq1  TTCCTTCCTAAGTTGATATA--GAAAATGCATTTCTATACTTGGGAATGT  281
      | ||| |||||| |||||||   ||||||||||||||||  |||||||||
seq2  TCCCTCCCTAAGGTGATATAAGAAAAATGCATTTCTATAACTGGGAATGT  280

seq1  TTTCCTT-CCATTGTCACAATTGCTTGG-TCTTCTAATTAGAACAGGTTT  329
      ||||||| |||||||||||||||||||| |||||||||||||||||||||
seq2  TTTCCTTCCCATTGTCACAATTGCTTGGTTCTTCTAATTAGAACAGGTTT  330

seq1  TACTTAAGCCTGTGTGTGTGGCTCTGCTGGGTGGACGAGTAATGAAACAT  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAGCCTGTGTGTGTGGCTCTGCTGGGTGGACGAGTAATGAAACAT  380

seq1  TCAACTGACAATCACCTTTTGGATAAACACAAGTGAAAATTTCTC-TCTT  428
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCAACTGACAATCACCTTTTGGATAAACACAAGTGAAAATTTCTCTTCTT  430

seq1  AACTACTTTGATAATCAGAGATAGAAAGTGACAGGAAGAGGAATGAGAGA  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTTTGATAATCAGAGATAGAAAGTGACAGGAAGAGGAATGAGAGA  480

seq1  TGGTAAAGTAAAATTATTAGAGATGGAAAACTTTCTACTCATTAAAATCT  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAGTAAAATTATTAGAGATGGAAAACTTTCTACTCATTAAAATCT  530

seq1  AAAGCAGCACAATCAGAAGACTGTTACTGTTCGAAAATCCTCTCATGTGA  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCACAATCAGAAGACTGTTACTGTTCGAAAATCCTCTCATGTGA  580

seq1  ATTCAAATCTGAGCAAAACCTAGAAGGCACAAAACCCATGCATTAGAAGA  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATCTGAGCAAAACCTAGAAGGCACAAAACCCATGCATTAGAAGA  630

seq1  CAGAACATTGCAGGTCTAGATTCTGAGGAGACAGCAAGTGTGTGTTCAAC  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACATTGCAGGTCTAGATTCTGAGGAGACAGCAAGTGTGTGTTCAAC  680

seq1  AACAACAGAGAGGAGAAAATCAGGGAGCAGAAATGATGAGGGAGGGCAGA  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAGAGAGGAGAAAATCAGGGAGCAGAAATGATGAGGGAGGGCAGA  730

seq1  AGAGAGAGAGGCAGGCCACAGTAAGGACTTAGCAGTCTGTGATGGCATAG  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGGCAGGCCACAGTAAGGACTTAGCAGTCTGTGATGGCATAG  780

seq1  GAAAGAAATGAAATGGCCTGAGTGTTTATATTCCTAATTATTTTGACGTG  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAATGAAATGGCCTGAGTGTTTATATTCCTAATTATTTTGACGTG  830

seq1  CATTTATATGTGCTGTTTACATCATTCTCCCTCCTCCCGCTATCCTCTCC  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATATGTGCTGTTTACATCATTCTCCCTCCTCCCGCTATCCTCTCC  880

seq1  TGTGTTGCTGTCTGCCTCTTCTTAAATTCATGGATAATCTAAATTGTGAA  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGCTGTCTGCCTCTTCTTAAATTCATGGATAATCTAAATTGTGAA  930

seq1  TGAATTACTTTTTTAAGAACAAGAGATCAAGGATTAGAGCCCAAGAGAAA  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTACTTTTTTAAGAACAAGAGATCAAGGATTAGAGCCCAAGAGAAA  980

seq1  GAAAGACACTGTGGTCTAGCTGAGGCAAAAAAAAAAAAAAAAAAAAAAAA  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACACTGTGGTCTAGCTGAGGCAAAAAAAAAAAAAAAAAAAAAAAA  1030

seq1  CATGGGACACAGTGGTCGAGGAAATTACAGCAAGTGGTTGTATTCAGAAC  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGACACAGTGGTCGAGGAAATTACAGCAAGTGGTTGTATTCAGAAC  1080

seq1  ATACCTTGAACACAAAGCCATTAACATACTCATACATTAGGTATGGGATC  1128
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTGAACACAAAGCCATTAACATACTCATACATTAGGTATGGGATC  1130

seq1  ATTGCATGGATAATGCAAAGGTAATCTTAGGTGGAATTC  1167
      |||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATGGATAATGCAAAGGTAATCTTAGGTGGAATTC  1169