BAC Information

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BAC

Clone NameB6Ng01-250F21
Chromosome11 (Build37)
Map Location 7,070,426 - 7,071,496
singlet/doubletsinglet
Overlap geneAdcy1
Upstream geneNudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332
Downstream geneLOC100041347, Igfbp1, Igfbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250F21.bB6Ng01-250F21.g
ACCGA057933GA057934
length1,0621,204
definitionB6Ng01-250F21.b B6Ng01-250F21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcgggaggccctacagccccacttctgatctcctggcccgtaca
ttctcttccaacccctcctggctgctggcttctgactgctgcgacagtgg
gccctcctcttcctgtgccatggctgcacattcagagaggaggggtgtgt
gctgtcttctctgtggtgtcttggacgctgtaagtctaacaagaatcaag
ccttcgtttatgctaagagcgattgacccactatacccacgagtgctctc
cttgctggaagacatcctctccttggcctaaccagctctcctcttggtgg
tttcagagtcggcacagtgtgcattcctgagtctaggtgtggtgtccctg
ctccagggtgatgggaaagagtggccctgttgactgacacctgggacctc
ccacctgtgtgtcccagtaactgcaactgtgaggaaatcccgttagggta
caggattctggaggagttggtaggaagcaactggctggaaatagcgggat
gaagcctggcttttgaagatactcagtttcaatacaggaagggaggcagc
ttgaagcagggcaggtgggcataagccctgcctgatcttgtctgtggagg
cccatttcctcacggctccccaagagcttgcccccttccaagggtcctat
cttcttagaatagggcagagcaaagcctagttttccccggcagggtgcat
atgtggtgttctggattcagctctggttcaagtgtgtggctttgttggtg
cctgggtaattttccaggtcagccagcgcccgttcctgggacactcagct
gagtctagactcagttacctgtgggtaggaagaaaactttcagcaaggga
gagctggaggctgcatgccaagtctccaagtcttgaggctgcacctcagt
gccctagggcccgggtggggcagctgtgaagattgcacattctctgtggc
caggatggagcttgtgggtggtggtaagggtatcatctagcacttctgca
gaggaactctgacccatgccacctgctttgttgcttctgatgatatcagt
agccacgcctgg
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagg
agatgctggcgaggatgtggagaaaaaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatctgtctggcagttcctcg
gaaaattggacatagtactaccacaggatcccacaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctagaaagaacccagat
gctcctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttataaaattcctatgcaa
atggatgtacctggaggtcatcatcctgagtgaggtaaactattcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaaac
ttaaaatacccaggatataagatacaatttgctaaacacatgaaactcaa
gaagaatgaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaactcccatggaaggagttacagagacaaagtttggagctgagacg
aaaagatggaccatctagagactgccattcccggggatctatccaataat
cagcctccaaacgctgacaccattgcatacactagcaagattttgctgaa
aggacccagatatagctgtctattgtgagactatgcccgggcctagcaaa
tacagcagtggatgctcacagtcagctaatggatggatcacagtgccccc
aatggaggagctagagaaagtacccaaggagctgggaggatctgcaaccc
tataggtggaacaacaatatgaactaaccagtaccccggagctcatgtct
ctaagctgcatatgtattcagaaagatggcttgtttgcattcaggtgaaa
aggagaggcccaattgcttgtacaaacttatatggctcagtacagcatgc
aaggtcagattggcagattggttgatggtgtgcggcagaactgctcctgt
tcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7070426_7071496
seq2: B6Ng01-250F21.b_44_1105

seq1  GAATTCTCGGGAGGCCCTACAGCCCCACTTCTGATCTCCTGGCCCGTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGGGAGGCCCTACAGCCCCACTTCTGATCTCCTGGCCCGTACA  50

seq1  TTCTCTTCCAACCCCTCCTGGCTGCTGGCTTCTGACTGCTGCGACAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCCAACCCCTCCTGGCTGCTGGCTTCTGACTGCTGCGACAGTGG  100

seq1  GCCCTCCTCTTCCTGTGCCATGGCTGCACATTCAGAGAGGAGGGGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCTCTTCCTGTGCCATGGCTGCACATTCAGAGAGGAGGGGTGTGT  150

seq1  GCTGTCTTCTCTGTGGTGTCTTGGACGCTGTAAGTCTAACAAGAATCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTCTCTGTGGTGTCTTGGACGCTGTAAGTCTAACAAGAATCAAG  200

seq1  CCTTCGTTTATGCTAAGAGCGATTGACCCACTATACCCACGAGTGCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCGTTTATGCTAAGAGCGATTGACCCACTATACCCACGAGTGCTCTC  250

seq1  CTTGCTGGAAGACATCCTCTCCTTGGCCTAACCAGCTCTCCTCTTGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGGAAGACATCCTCTCCTTGGCCTAACCAGCTCTCCTCTTGGTGG  300

seq1  TTTCAGAGTCGGCACAGTGTGCATTCCTGAGTCTAGGTGTGGTGTCCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAGTCGGCACAGTGTGCATTCCTGAGTCTAGGTGTGGTGTCCCTG  350

seq1  CTCCAGGGTGATGGGAAAGAGTGGCCCTGTTGACTGACACCTGGGACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGGTGATGGGAAAGAGTGGCCCTGTTGACTGACACCTGGGACCTC  400

seq1  CCACCTGTGTGTCCCAGTAACTGCAACTGTGAGGAAATCCCGTTAGGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGTGTGTCCCAGTAACTGCAACTGTGAGGAAATCCCGTTAGGGTA  450

seq1  CAGGATTCTGGAGGAGTTGGTAGGAAGCAACTGGCTGGAAATAGCGGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTCTGGAGGAGTTGGTAGGAAGCAACTGGCTGGAAATAGCGGGAT  500

seq1  GAAGCCTGGCTTTTGAAGATACTCAGTTTCAATACAGGAAGGGAGGCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTGGCTTTTGAAGATACTCAGTTTCAATACAGGAAGGGAGGCAGC  550

seq1  TTGAAGCAGGGCAGGTGGGCATAAGCCCTGCCTGATCTTGTCTGTGGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCAGGGCAGGTGGGCATAAGCCCTGCCTGATCTTGTCTGTGGAGG  600

seq1  CCCATTTCCTCACGGCTCCCCAAGAGCTTGCCCCCTTCCAAGGGTCCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTCCTCACGGCTCCCCAAGAGCTTGCCCCCTTCCAAGGGTCCTAT  650

seq1  CTTCTTAGAATAGGGCAGAGCAAAGCCTAGTTTTCCCCGGCAGGGTGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAGAATAGGGCAGAGCAAAGCCTAGTTTTCCCCGGCAGGGTGCAT  700

seq1  ATGTGGTGTTCTGGATTCAGCTCTGGTTCAAGTGTGTGGCTTTGTTGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTGTTCTGGATTCAGCTCTGGTTCAAGTGTGTGGCTTTGTTGGTG  750

seq1  CCTGGGTAATTTTCCAGGTCAGCCAGCGCCCGTTCCTGGGACACTCAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTAATTTTCCAGGTCAGCCAGCGCCCGTTCCTGGGACACTCAGCT  800

seq1  GAGTCTAGACTCAGGTTACCTGTGGGTAGGAAGAAAACTTTCAGCAAGGG  850
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAGTCTAGACTCA-GTTACCTGTGGGTAGGAAGAAAACTTTCAGCAAGGG  849

seq1  AGAGCTGGAGGCTGCATGCCAAGTCTCCAAGTCTTTGAGGCTGCACCTCA  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGAGCTGGAGGCTGCATGCCAAGTCTCCAAGTC-TTGAGGCTGCACCTCA  898

seq1  GGTGCCCTAGGG-CCGGGTGGGGCAGCTGTGAAGATTGCACATTCTCTGT  949
       ||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  -GTGCCCTAGGGCCCGGGTGGGGCAGCTGTGAAGATTGCACATTCTCTGT  947

seq1  GGCCAGGGATGGAGCTTGTGGGTGGTGGTAAGGGTATCATCTAGCACCTT  999
      ||||| |||||||||||||||||||||||||||||||||||||||| |||
seq2  GGCCA-GGATGGAGCTTGTGGGTGGTGGTAAGGGTATCATCTAGCA-CTT  995

seq1  CTGCAGAGGAACTCTGACCCATGCCCACCCTGCTTTGTTGCCTTTCTGAT  1049
      |||||||||||||||||||||||||   |||||||||||||  |||||||
seq2  CTGCAGAGGAACTCTGACCCATGCC--ACCTGCTTTGTTGC--TTCTGAT  1041

seq1  GATATCAGGTAGCACGGCCTGG  1071
      ||||||| |||||   ||||||
seq2  GATATCA-GTAGCCACGCCTGG  1062