BAC Information

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BAC

Clone NameB6Ng01-250G24
Chromosome11 (Build37)
Map Location 62,691,798 - 62,835,005
singlet/doubletdoublet
Overlap geneFam18b, Cdrt4
Upstream geneAkap10, D630015H07, LOC626325, LOC100041558, Specc1, Adora2b, 2410012H22Rik, Ttc19, Ncor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10
Downstream geneTekt3, Pmp22, LOC433423, LOC100042799, LOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250G24.bB6Ng01-250G24.g
ACCGA057983GA057984
length1,193526
definitionB6Ng01-250G24.b B6Ng01-250G24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,691,798 - 62,692,977)(62,834,474 - 62,835,005)
sequence
gaattcaaattgcattcatataaaaagtgagaaccaaaaaaatttttttt
ccacacaacctcacaacacagggtgggccaccaaaatctttgtccaagca
ggttaggacataggtcatttgtccagcttcacacgaagatgcgcaattac
cttgcctgctttctcttttttgggaactaggtccatgtttcttcattatt
gtaacactgggtttgacatagtcctggcaaagaaccagataaaaccccgg
gttctgtgaagagtcccttcagttaagaaaaggtgagagggacattgcat
gagcctccaacagtctgacatagttgagcaaacagaatatctctatcatt
acagttgcaaagatggctttaaactctctgaatttgtctcgaaaaaccaa
aaaaaaaaaaaaaaaaaatctctgaattttaggtctaggcatgatcatgc
catcagcaggtgacttaaaacagtaataaaagcaaatttgtgccacttta
ctaaatgctctgtaaagccatcaccgtccttcccactttacagccgagga
aggatgtacatagagattggttatataattggtacatggagggcagaggc
gcgatactggcctctcttcttgttctgaggttatgccccttacagcagta
ccctcactgcttacgctagtcttcttgtctctttcttactcggttttttt
ttttttaatttctttccaaggacacatttatttctcaattttctttaaca
tttaaatcgcttaagaaagactatactaaaatacaatacatttacaaggt
taaattataaagctccgcctctctcagggcgtccctgctggtggtaatga
ctcacagtttgtacttctttggtagcaaaaaaacattttccattcataac
ccaaagaaactttcgctttagaacccatttaagttaggccaggtttaatt
cccaagcgttttgctttttccttagaaagtgcaggccctttgccccttgc
tcacgcttgcccgacacttcaacttcagctcctacagagttctctgcgtc
aaggccccggccacacaacctcggctttcttaccgcccggcgttcggtcg
cgtggacaagcttctttcggctcggcccactatggagccgcccaaggtat
ggaaccgctatcgccttccggtctctagagtgtggccctccca
tcaccctgttccatgtggccaaaccaagattaacctccacatctttgatt
tatatcatgactgagactgtggtaaatccagggtcagggaaaggcccaaa
ctacatgtagaattctcaccctgtttcatgttgccaaaccgcagggatgt
ggtggagtaatgggaggtgagagacaccaggccttgcatgggttcaaagg
tcacacaaacagctggacctgggacagagttgctattcacagggaactgt
ctctggttagcaaatataagacgaaggtcctcaaaaggaaggtaggtttt
ggtgattaatttatttaaggtgaagggcagggtagagtatggacgatgag
cacaattcttgctggcgtctgtgtgctggcatgtgccaaaacagccctga
tgctcggccagattttctctatttaagatgcaacagagagagatgaggcc
tgggtcagacctttaaacctgtgagttccaggccagggctacagagagaa
cttgtgtgggaggagtggggggagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_62691798_62692977
seq2: B6Ng01-250G24.b_47_1239

seq1  GAATTCAAATTGCATTCATATAAAAAGTGAGAACCAAAAAAATTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTGCATTCATATAAAAAGTGAGAACCAAAAAAATTTTTTTT  50

seq1  CCACACAACCTCACAACACAGGGTGGGCCACCAAAATCTTTGTCCAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAACCTCACAACACAGGGTGGGCCACCAAAATCTTTGTCCAAGCA  100

seq1  GGTTAGGACATAGGTCATTTGTCCAGCTTCACACGAAGATGCGCAATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGGACATAGGTCATTTGTCCAGCTTCACACGAAGATGCGCAATTAC  150

seq1  CTTGCCTGCTTTCTCTTTTTTGGGAACTAGGTCCATGTTTCTTCATTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTGCTTTCTCTTTTTTGGGAACTAGGTCCATGTTTCTTCATTATT  200

seq1  GTAACACTGGGTTTGACATAGTCCTGGCAAAGAACCAGATAAAACCCCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACTGGGTTTGACATAGTCCTGGCAAAGAACCAGATAAAACCCCGG  250

seq1  GTTCTGTGAAGAGTCCCTTCAGTTAAGAAAAGGTGAGAGGGACATTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTGAAGAGTCCCTTCAGTTAAGAAAAGGTGAGAGGGACATTGCAT  300

seq1  GAGCCTCCAACAGTCTGACATAGTTGAGCAAACAGAATATCTCTATCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCCAACAGTCTGACATAGTTGAGCAAACAGAATATCTCTATCATT  350

seq1  ACAGTTGCAAAGATGGCTTTAAACTCTCTGAATTTGTCTCGAAAAACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGCAAAGATGGCTTTAAACTCTCTGAATTTGTCTCGAAAAACCAA  400

seq1  AAAAAAAAAAAAAAAAAATCTCTGAATTTTAGGTCTAGGCATGATCATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAATCTCTGAATTTTAGGTCTAGGCATGATCATGC  450

seq1  CATCAGCAGGTGACTTAAAACAGTAATAAAAGCAAATTTGTGCCACTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCAGGTGACTTAAAACAGTAATAAAAGCAAATTTGTGCCACTTTA  500

seq1  CTAAATGCTCTGTAAAGCCATCACCGTCCTTCCCACTTTACAGCCGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGCTCTGTAAAGCCATCACCGTCCTTCCCACTTTACAGCCGAGGA  550

seq1  AGGATGTACATAGAGATTGGTTATATAATTGGTACATGGAGGGCAGAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTACATAGAGATTGGTTATATAATTGGTACATGGAGGGCAGAGGC  600

seq1  GCGATACTGGCCTCTCTTCTTGTTCTGAGGTTATGCCCCTTACAGCAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATACTGGCCTCTCTTCTTGTTCTGAGGTTATGCCCCTTACAGCAGTA  650

seq1  CCCTCACTGCTTACGCTAGTCTTCTTGTCTCTTTCTTACTCGGTTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACTGCTTACGCTAGTCTTCTTGTCTCTTTCTTACTCGGTTTTTTT  700

seq1  TTTTTTAATTTCTTTCCAAGGACACATTTATTTCTCAATTTTCTTTAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATTTCTTTCCAAGGACACATTTATTTCTCAATTTTCTTTAACA  750

seq1  TTTAAATCGCTTAAGAAAGACTATACTAAAATACAATACATTTACAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATCGCTTAAGAAAGACTATACTAAAATACAATACATTTACAAGGT  800

seq1  TAAATTATAAAGCTCCGCCTCTCTCAGGGCGTCCCTGCTGGTGGTAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATAAAGCTCCGCCTCTCTCAGGGCGTCCCTGCTGGTGGTAATGA  850

seq1  CTCACAGTTTGTACTTCTTTGGTAGC-AAAAAACATTTTCCATTCATAAC  899
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTCACAGTTTGTACTTCTTTGGTAGCAAAAAAACATTTTCCATTCATAAC  900

seq1  CC-AAGAAAC-TTCGCTTTAGAACCCA-TTAAGTTA-GCCAG--TTTATT  943
      || ||||||| |||||||||||||||| |||||||| |||||  || |||
seq2  CCAAAGAAACTTTCGCTTTAGAACCCATTTAAGTTAGGCCAGGTTTAATT  950

seq1  CCCAAGCGTTTTGC-TTTTCCTTAG-AAGTGCAG--CCCTTGCCCC-TGC  988
      |||||||||||||| |||||||||| ||||||||  || ||||||| |||
seq2  CCCAAGCGTTTTGCTTTTTCCTTAGAAAGTGCAGGCCCTTTGCCCCTTGC  1000

seq1  TCACGCTTGCCCCGCCCACCTCCACCTCAGCCCCTACAGAG-TCTCTGCG  1037
      ||||||||||||    ||| || || ||||| ||||||||| ||||||||
seq2  TCACGCTTGCCC--GACACTTCAACTTCAGCTCCTACAGAGTTCTCTGCG  1048

seq1  TCAAGGCCCCGCCCACAC-ACCCCGCC--TCCTACCGCCC-GCG-TCCGT  1082
      ||||||||||| |||||| ||| || |  || |||||||| ||| || ||
seq2  TCAAGGCCCCGGCCACACAACCTCGGCTTTCTTACCGCCCGGCGTTCGGT  1098

seq1  CGCGTGGACCAGC-TCTTTCCGCCCCGCCCACTATGGAGCCCCGCCCCAA  1131
      ||||||||| ||| |||||| || | |||||||||||||||    |||||
seq2  CGCGTGGACAAGCTTCTTTCGGCTCGGCCCACTATGGAGCC---GCCCAA  1145

seq1  GGTATGGACCCGCCTATCGCCTTCCGGTCTCTGGAGTTGCGCCCTCCCA  1180
      |||||||| ||| ||||||||||||||||||| ||||   |||||||||
seq2  GGTATGGAACCG-CTATCGCCTTCCGGTCTCTAGAGTGTGGCCCTCCCA  1193

seq1: chr11_62834474_62835005
seq2: B6Ng01-250G24.g_66_597 (reverse)

seq1  AACTCCCCCCACTCCTCCCACACAAGTTCTCTCTGTAGCCCTGGCCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCCCCACTCCTCCCACACAAGTTCTCTCTGTAGCCCTGGCCTGGA  50

seq1  ACTCACAGGTTTAAAGGTCTGACCCAGGCCTCATCTCTCTCTGTTGCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAGGTTTAAAGGTCTGACCCAGGCCTCATCTCTCTCTGTTGCATC  100

seq1  TTAAATAGAGAAAATCTGGCCGAGCATCAGGGCTGTTTTGGCACATGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAGAGAAAATCTGGCCGAGCATCAGGGCTGTTTTGGCACATGCCA  150

seq1  GCACACAGACGCCAGCAAGAATTGTGCTCATCGTCCATACTCTACCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGACGCCAGCAAGAATTGTGCTCATCGTCCATACTCTACCCTGC  200

seq1  CCTTCACCTTAAATAAATTAATCACCAAAACCTACCTTCCTTTTGAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACCTTAAATAAATTAATCACCAAAACCTACCTTCCTTTTGAGGAC  250

seq1  CTTCGTCTTATATTTGCTAACCAGAGACAGTTCCCTGTGAATAGCAACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTCTTATATTTGCTAACCAGAGACAGTTCCCTGTGAATAGCAACTC  300

seq1  TGTCCCAGGTCCAGCTGTTTGTGTGACCTTTGAACCCATGCAAGGCCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCAGGTCCAGCTGTTTGTGTGACCTTTGAACCCATGCAAGGCCTGG  350

seq1  TGTCTCTCACCTCCCATTACTCCACCACATCCCTGCGGTTTGGCAACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCACCTCCCATTACTCCACCACATCCCTGCGGTTTGGCAACATG  400

seq1  AAACAGGGTGAGAATTCTACATGTAGTTTGGGCCTTTCCCTGACCCTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGGTGAGAATTCTACATGTAGTTTGGGCCTTTCCCTGACCCTGGA  450

seq1  TTTACCACAGTCTCAGTCATGATATAAATCAAAGATGTGGAGGTTAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCACAGTCTCAGTCATGATATAAATCAAAGATGTGGAGGTTAATCT  500

seq1  TGGTTTGGCCACATGGAACAGGGTGAGAATTC  532
      ||||||||||||||||||||||||||||||||
seq2  TGGTTTGGCCACATGGAACAGGGTGAGAATTC  532