BAC Information

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BAC

Clone NameB6Ng01-251A13
Chromosome11 (Build37)
Map Location 91,630,750 - 91,759,089
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC638903, EG664976, Kif2b
Downstream geneLOC382545
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251A13.bB6Ng01-251A13.g
ACCGA058411GA058412
length1,1011,102
definitionB6Ng01-251A13.b B6Ng01-251A13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,630,750 - 91,631,852)(91,758,000 - 91,759,089)
sequence
gaattcacttgattttcagctaccaaggagcaaagaaagtctcctttgac
aaacctatttgctgctagtctaggtttacaaaaattatatttcaattaat
tagtattacattgtctttgcctggagaaattgatttttatccttaaagca
atagaaacagttgtaacattttattctttatccttttaaaatgattgaaa
caggaggaaattcaatgtgaaggttgggattgtatgttaaagctgacgga
ggacttaaatatagaatgcctattccttggttcagtgctcttgcaggtat
aaaattacatggagatatatattttgtagattttatatttcctttaaaag
tcctcttgctaaatttgaaggcctatgtgttaacaccctacagagaacaa
aatcaatgcaagcaatataaattacagcggctgataatagctttatgtgt
tggtgctctatcatgcttttacttaattttccctttgaggaaaataaatt
atcttgggtgttgaattatttgatcaaggctatgcttgttcttcaggctc
tgtagactctgagtcacataggctgaggctgtggctatataattgtggct
tgcaaataaaaacagaacactaaaaatgtctgaatgaaataaaatatcca
gctggtctaaaaacagtgacctatcaaactctcaaaattagtgttttctc
ttttctttcagtgactatgtctcttagccccattgaatgtgaatgagttc
ataatataagccttctattttgcctttcagtaattttactcttttgaatc
atcatctcttatgatatgaaatacagctgcctcctttaatattttccttg
ttaaaactatcaggaaagaatgtgtccatacaggagtaacacatattctt
attgtgtaaacaaagagagttacaacaatgtctaagttgtcctcaggaat
atttgggatggcatttccatggcacttggaaaacagaagaaaataaacat
aggaaagagggatgggaattggttcaattagccaacaattatgagagttg
aatgctttaaatgctactagaaaaaaaattgggttaataaataatggaag
c

gaattctctgtatttagtgggagtggtaaagtcagacacaatctattaca
tgtttatttatagacattatttttattacgactaaaatattttggaaaaa
gtagaccatatttaaattatagctataaatttcctcacgtggggttatag
atgatgtgggttataccatcagttgtcatttattttacctgcttattata
gctgtgaaaatgatattgttgtttactgaggacaagatatgtattgtgct
taagaacaaccaggatattcagtgtgacagacactacagagagccatcaa
acaatccccagccaggtgcggtggcccatgtctgtaataccaaacttttc
agcttctggctgaattgtgagttcatttgagggcagcctgagctatattg
taatactgccataaactaacaagagaaatacaaacaaaataaaacaaaac
tatttcttaattgttataagaagttgcaaacttttctgtaaaaaaatttg
caacaaaaatgcaaactcaagttgtttcttcattccaacttactccacta
aaataaaacataaataatatgtatatgtatgtgtgtgagagagaaagaaa
atgcaaaagcaagacaaatggagacagaaagacaaggacagagacacaaa
gacaaccagaaagcgatagcgaagttcgagggaagagatggttgtcatat
ttccactgagttgatttcatttaatggcaatggaaaaaaaagtaagtaga
aaagtagatacggattccaagttgatttttttaattattacttttcaaat
gatatataattaacaaatataaatatgtaaagaacccttgaattactaaa
ctcacaggcagtgggagttcaaaaccttcctagggtaattaacatgagac
tgggaattctgagaagtcaatggggagtcttcaaaataatagaaggaacg
ttataaacaggaactacatgatgtttagtaatgaaaggaagacgtaaagt
gtactgcatttcaagaatgactgtgcaagaagaattgttagaaggtccag
tggcattagaacattttgggtggatgactctaccaatgcccctttacaca
gc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_91630750_91631852
seq2: B6Ng01-251A13.b_47_1147

seq1  GAATTCACTTGATTTTCAGCTACCAAGGAGCAAAGAAAGTCTCCTTTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGATTTTCAGCTACCAAGGAGCAAAGAAAGTCTCCTTTGAC  50

seq1  AAACCTATTTGCTGCTAGTCTAGGTTTACAAAAATTATATTTCAATTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTATTTGCTGCTAGTCTAGGTTTACAAAAATTATATTTCAATTAAT  100

seq1  TAGTATTACATTGTCTTTGCCTGGAGAAATTGATTTTTATCCTTAAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTACATTGTCTTTGCCTGGAGAAATTGATTTTTATCCTTAAAGCA  150

seq1  ATAGAAACAGTTGTAACATTTTATTCTTTATCCTTTTAAAATGATTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACAGTTGTAACATTTTATTCTTTATCCTTTTAAAATGATTGAAA  200

seq1  CAGGAGGAAATTCAATGTGAAGGTTGGGATTGTATGTTAAAGCTGACGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGAAATTCAATGTGAAGGTTGGGATTGTATGTTAAAGCTGACGGA  250

seq1  GGACTTAAATATAGAATGCCTATTCCTTGGTTCAGTGCTCTTGCAGGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTAAATATAGAATGCCTATTCCTTGGTTCAGTGCTCTTGCAGGTAT  300

seq1  AAAATTACATGGAGATATATATTTTGTAGATTTTATATTTCCTTTAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACATGGAGATATATATTTTGTAGATTTTATATTTCCTTTAAAAG  350

seq1  TCCTCTTGCTAAATTTGAAGGCCTATGTGTTAACACCCTACAGAGAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGCTAAATTTGAAGGCCTATGTGTTAACACCCTACAGAGAACAA  400

seq1  AATCAATGCAAGCAATATAAATTACAGCGGCTGATAATAGCTTTATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGCAAGCAATATAAATTACAGCGGCTGATAATAGCTTTATGTGT  450

seq1  TGGTGCTCTATCATGCTTTTACTTAATTTTCCCTTTGAGGAAAATAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTCTATCATGCTTTTACTTAATTTTCCCTTTGAGGAAAATAAATT  500

seq1  ATCTTGGGTGTTGAATTATTTGATCAAGGCTATGCTTGTTCTTCAGGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGTGTTGAATTATTTGATCAAGGCTATGCTTGTTCTTCAGGCTC  550

seq1  TGTAGACTCTGAGTCACATAGGCTGAGGCTGTGGCTATATAATTGTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACTCTGAGTCACATAGGCTGAGGCTGTGGCTATATAATTGTGGCT  600

seq1  TGCAAATAAAAACAGAACACTAAAAATGTCTGAATGAAATAAAATATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATAAAAACAGAACACTAAAAATGTCTGAATGAAATAAAATATCCA  650

seq1  GCTGGTCTAAAAACAGTGACCTATCAAACTCTCAAAATTAGTGTTTTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCTAAAAACAGTGACCTATCAAACTCTCAAAATTAGTGTTTTCTC  700

seq1  TTTTCTTTCAGTGACTATGTCTCTTAGCCCCATTGAATGTGAATGAGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCAGTGACTATGTCTCTTAGCCCCATTGAATGTGAATGAGTTC  750

seq1  ATAATATAAGCCTTCTATTTTGCCTTTCAGTAATTTTACTCTTTTGAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATAAGCCTTCTATTTTGCCTTTCAGTAATTTTACTCTTTTGAATC  800

seq1  ATCATCTCTTATGATATGAAATACAGCTGCCTCCTTTAATATTTTCCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTCTTATGATATGAAATACAGCTGCCTCCTTTAATATTTTCCTTG  850

seq1  TTAAAACTATCAGGAAAGAATGTGTCCATACAGGAGTAACACATATTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACTATCAGGAAAGAATGTGTCCATACAGGAGTAACACATATTCTT  900

seq1  ATTGTGTAAACAAAGAGAGTTACAACAATGTCTAAGTTGTCCTCAGGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTAAACAAAGAGAGTTACAACAATGTCTAAGTTGTCCTCAGGAAT  950

seq1  ATTT-GGATGGCATTTCCATGGCACTTGGAAAACAGAAGAAAAATAAAAC  999
      |||| ||||||||||||||||||||||||||||||||||||||   ||||
seq2  ATTTGGGATGGCATTTCCATGGCACTTGGAAAACAGAAGAAAA--TAAAC  998

seq1  ATAGGAAAGAGGGAT-GGAATTGGTTCAATTAGCCAACAATTAATGAAGA  1048
      ||||||||||||||| |||||||||||||||||||||||||| ||| |||
seq2  ATAGGAAAGAGGGATGGGAATTGGTTCAATTAGCCAACAATT-ATG-AGA  1046

seq1  GTTGAATGCTTTAAAATGCTACTAG-AAAAAAATTGGTTTAATAAAATAA  1097
      |||||||||||| |||||||||||| ||||||||||| ||||| ||||||
seq2  GTTGAATGCTTT-AAATGCTACTAGAAAAAAAATTGGGTTAAT-AAATAA  1094

seq1  T-GAAGC  1103
      | |||||
seq2  TGGAAGC  1101


seq1: chr11_91758000_91759089
seq2: B6Ng01-251A13.g_66_1167 (reverse)

seq1  GCTGTGTAA--GGGCATTGGT-GAGTCATCCACC--AAATG-TCT-ATGC  43
      |||||||||  |||||||||| ||||||||||||  ||||| ||| ||||
seq2  GCTGTGTAAAGGGGCATTGGTAGAGTCATCCACCCAAAATGTTCTAATGC  50

seq1  AACTGGACC-TCTAACAATTCTTCTTGCACAGTCA-TCTTGAAATGCAGT  91
       |||||||| ||||||||||||||||||||||||| ||||||||||||||
seq2  CACTGGACCTTCTAACAATTCTTCTTGCACAGTCATTCTTGAAATGCAGT  100

seq1  ACACTTTACGTCTT-CTTTCATTACTAAACATCATGTAGTTCCTGTTTAT  140
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACACTTTACGTCTTCCTTTCATTACTAAACATCATGTAGTTCCTGTTTAT  150

seq1  AACGTTCCTTCTTATTATTTTGAAGACT-CCCATTGACTTCTCAGAATT-  188
      ||||||||||| |||||||||||||||| |||||||||||||||||||| 
seq2  AACGTTCCTTC-TATTATTTTGAAGACTCCCCATTGACTTCTCAGAATTC  199

seq1  CCAGTCTCATGTTAATTACCCTAGGAAGGTTTTG-ACTCCCACTGCCTGT  237
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCAGTCTCATGTTAATTACCCTAGGAAGGTTTTGAACTCCCACTGCCTGT  249

seq1  GAGTTTAGTAATTCAAGGGTTCTTTACATATTTATATTTGTTAATTATAT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTAGTAATTCAAGGGTTCTTTACATATTTATATTTGTTAATTATAT  299

seq1  ATCATTTGAAAAGTAATAATTAAAAAAATCAACTTGGAATCCGTATCTAC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTGAAAAGTAATAATTAAAAAAATCAACTTGGAATCCGTATCTAC  349

seq1  TTTTCTACTTACTTTTTTTTCCATTGCCATTAAATGAAATCAACTCAGTG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACTTACTTTTTTTTCCATTGCCATTAAATGAAATCAACTCAGTG  399

seq1  GAAATATGACAACCATCTCTTCCCTCGAACTTCGCTATCGCTTTCTGGTT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATGACAACCATCTCTTCCCTCGAACTTCGCTATCGCTTTCTGGTT  449

seq1  GTCTTTGTGTCTCTGTCCTTGTCTTTCTGTCTCCATTTGTCTTGCTTTTG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGTGTCTCTGTCCTTGTCTTTCTGTCTCCATTTGTCTTGCTTTTG  499

seq1  CATTTTCTTTCTCTCTCACACACATACATATACATATTATTTATGTTTTA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTTTCTCTCTCACACACATACATATACATATTATTTATGTTTTA  549

seq1  TTTTAGTGGAGTAAGTTGGAATGAAGAAACAACTTGAGTTTGCATTTTTG  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTGGAGTAAGTTGGAATGAAGAAACAACTTGAGTTTGCATTTTTG  599

seq1  TTGCAAATTTTTTTACAGAAAAGTTTGCAACTTCTTATAACAATTAAGAA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATTTTTTTACAGAAAAGTTTGCAACTTCTTATAACAATTAAGAA  649

seq1  ATAGTTTTGTTTTATTTTGTTTGTATTTCTCTTGTTAGTTTATGGCAGTA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTGTTTTATTTTGTTTGTATTTCTCTTGTTAGTTTATGGCAGTA  699

seq1  TTACAATATAGCTCAGGCTGCCCTCAAATGAACTCACAATTCAGCCAGAA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATATAGCTCAGGCTGCCCTCAAATGAACTCACAATTCAGCCAGAA  749

seq1  GCTGAAAAGTTTGGTATTACAGACATGGGCCACCGCACCTGGCTGGGGAT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAAGTTTGGTATTACAGACATGGGCCACCGCACCTGGCTGGGGAT  799

seq1  TGTTTGATGGCTCTCTGTAGTGTCTGTCACACTGAATATCCTGGTTGTTC  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGATGGCTCTCTGTAGTGTCTGTCACACTGAATATCCTGGTTGTTC  849

seq1  TTAAGCACAATACATATCTTGTCCTCAGTAAACAACAATATCATTTTCAC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCACAATACATATCTTGTCCTCAGTAAACAACAATATCATTTTCAC  899

seq1  AGCTATAATAAGCAGGTAAAATAAATGACAACTGATGGTATAACCCACAT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATAATAAGCAGGTAAAATAAATGACAACTGATGGTATAACCCACAT  949

seq1  CATCTATAACCCCACGTGAGGAAATTTATAGCTATAATTTAAATATGGTC  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATAACCCCACGTGAGGAAATTTATAGCTATAATTTAAATATGGTC  999

seq1  TACTTTTTCCAAAATATTTTAGTCGTAATAAAAATAATGTCTATAAATAA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTCCAAAATATTTTAGTCGTAATAAAAATAATGTCTATAAATAA  1049

seq1  ACATGTAATAGATTGTGTCTGACTTTACCACTCCCACTAAATACAGAGAA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAATAGATTGTGTCTGACTTTACCACTCCCACTAAATACAGAGAA  1099

seq1  TTC  1090
      |||
seq2  TTC  1102


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