BAC Information

Click to search

BAC

Clone NameB6Ng01-251F08
Chromosome11 (Build37)
Map Location 57,380,343 - 57,496,248
singlet/doubletdoublet
Overlap geneGalnt10
Upstream geneGria1, LOC667878, 1810073G14Rik, Mfap3
Downstream geneSap30l, Hand1, LOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325, Olfr324, 2210407C18Rik, Olfr323, Trim58, Olfr216, OTTMUSG00000005755
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251F08.bB6Ng01-251F08.g
ACCGA058619GA058620
length974205
definitionB6Ng01-251F08.b B6Ng01-251F08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,380,343 - 57,381,248)(57,496,044 - 57,496,248)
sequence
gaattcattagctaggggtataccgcaccgccaaagaagcacgtatgtgg
tgctcgcaccctggagagccctctgcacgagacaccaggtcaccttccgc
tgctgcagtcaaccagacaagtgttgcatctaccaacactttatcatgaa
tcttgccgcctgcctgacagcctctgcccctcagattagatttcaggaac
tagactgtcgttttcctctacctgggaagacagttataagcgcaggggag
actagccatcgttataggtagcctaaccagagaggcagctgcaacagaac
agctcccctccccacctccccggctgcctgcaatgaaggagcagtgggcc
acagcttggatggtgtggttattataattgttttttattatgtgtagatg
tgaatcaaagtttgtattgattaatattctgctgctgtgataaaatacca
tgaccaacgcaatttatagaaggaagaattttatgcctgagttcgaggcc
agcctggtctgcacagtgagttccaggacagacagggctacacagagaaa
ccctaccaaaataataataataataatattttaaaaggaagagtttattc
tagcttatagttgcagaggaataggagtccactctggtgaggaggcacgg
aagtggaaggtgtccagagcaggaaatagaagctgaaagctcacaccctc
aatagcaaacatgaagaaagagtgaaccaggtgtaacacgaggcttttaa
tctcaaagcccacatccactgacatacttcttccaccaaggccacacacc
tcttaaacctctcccaaacagcgccaccatctgggggactaggtattcaa
gtaccaagtcctgtggaagacgggttcttcactcagatcaccacagaagt
tagctctcagcagcctttctcaggaacatccaccctttttgagacagaat
cttccctgggcctggaacccagcc
ctgcagttagtccatgcaacagatgctgccattattctgattttacaccc
gagagtgttgatgaagtcacttgtccagagtcacagctggagggacaggc
tgggggtgtgcacacagcagagtctggggtctggctaaccttgctggtct
ctctcagtcaaagcagactcacccaagagacagtgggggggggagcgggg
ggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_57380343_57381248
seq2: B6Ng01-251F08.b_47_955

seq1  GAATTCATTAGCTAGGGGTATACCGCACCGCCAAAGAAGCACGTATGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGCTAGGGGTATACCGCACCGCCAAAGAAGCACGTATGTGG  50

seq1  TGCTCGCACCCTGGAGAGCCCTCTGCACGAGACACCAGGTCACCTTCCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCGCACCCTGGAGAGCCCTCTGCACGAGACACCAGGTCACCTTCCGC  100

seq1  TGCTGCAGTCAACCAGACAAGTGTTGCATCTACCAACACTTTATCATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAGTCAACCAGACAAGTGTTGCATCTACCAACACTTTATCATGAA  150

seq1  TCTTGCCGCCTGCCTGACAGCCTCTGCCCCTCAGATTAGATTTCAGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCGCCTGCCTGACAGCCTCTGCCCCTCAGATTAGATTTCAGGAAC  200

seq1  TAGACTGTCGTTTTCCTCTACCTGGGAAGACAGTTATAAGCGCAGGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGTCGTTTTCCTCTACCTGGGAAGACAGTTATAAGCGCAGGGGAG  250

seq1  ACTAGCCATCGTTATAGGTAGCCTAACCAGAGAGGCAGCTGCAACAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCCATCGTTATAGGTAGCCTAACCAGAGAGGCAGCTGCAACAGAAC  300

seq1  AGCTCCCCTCCCCACCTCCCCGGCTGCCTGCAATGAAGGAGCAGTGGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCCTCCCCACCTCCCCGGCTGCCTGCAATGAAGGAGCAGTGGGCC  350

seq1  ACAGCTTGGATGGTGTGGTTATTATAATTGTTTTTTATTATGTGTAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTGGATGGTGTGGTTATTATAATTGTTTTTTATTATGTGTAGATG  400

seq1  TGAATCAAAGTTTGTATTGATTAATATTCTGCTGCTGTGATAAAATACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAAAGTTTGTATTGATTAATATTCTGCTGCTGTGATAAAATACCA  450

seq1  TGACCAACGCAATTTATAGAAGGAAGAATTTTATGCCTGAGTTCGAGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAACGCAATTTATAGAAGGAAGAATTTTATGCCTGAGTTCGAGGCC  500

seq1  AGCCTGGTCTGCACAGTGAGTTCCAGGACAGACAGGGCTACACAGAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCTGCACAGTGAGTTCCAGGACAGACAGGGCTACACAGAGAAA  550

seq1  CCCTACCAAAATAATAATAATAATAATATTTTAAAAGGAAGAGTTTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCAAAATAATAATAATAATAATATTTTAAAAGGAAGAGTTTATTC  600

seq1  TAGCTTATAGTTGCAGAGGAATAGGAGTCCACTCTGGTGAGGAGGCACGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTATAGTTGCAGAGGAATAGGAGTCCACTCTGGTGAGGAGGCACGG  650

seq1  AAGTGGAAGGTGTCCAGAGCAGGAAATAGAAGCTGAAAGCTCACACCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAAGGTGTCCAGAGCAGGAAATAGAAGCTGAAAGCTCACACCCTC  700

seq1  AATAGCAAACATGAAGAAAGAGTGAACCAGGTGTAACACGAGGCTTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCAAACATGAAGAAAGAGTGAACCAGGTGTAACACGAGGCTTTTAA  750

seq1  TCTCAAAGCCCACATCCACTGACATACTTCTTCCACCAAGGCCACACACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAGCCCACATCCACTGACATACTTCTTCCACCAAGGCCACACACC  800

seq1  TCTTAAACCTCTCCCAAACAGCGCCACCATCT-GGGGACTAGGTATTCAA  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTTAAACCTCTCCCAAACAGCGCCACCATCTGGGGGACTAGGTATTCAA  850

seq1  GTACCAAGTCCTGTGGAAGAC-GGTTC-TCACTCAGATCACCACAGAAGT  897
      ||||||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  GTACCAAGTCCTGTGGAAGACGGGTTCTTCACTCAGATCACCACAGAAGT  900

seq1  TAGCTCTCA  906
      |||||||||
seq2  TAGCTCTCA  909

seq1: chr11_57496044_57496248
seq2: B6Ng01-251F08.g_72_276 (reverse)

seq1  CCCCCCCCCGCTCCCCCCCCCACTGTCTCTTGGGTGAGTCTGCTTTGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCGCTCCCCCCCCCACTGTCTCTTGGGTGAGTCTGCTTTGACT  50

seq1  GAGAGAGACCAGCAAGGTTAGCCAGACCCCAGACTCTGCTGTGTGCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGACCAGCAAGGTTAGCCAGACCCCAGACTCTGCTGTGTGCACAC  100

seq1  CCCCAGCCTGTCCCTCCAGCTGTGACTCTGGACAAGTGACTTCATCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCCTGTCCCTCCAGCTGTGACTCTGGACAAGTGACTTCATCAACA  150

seq1  CTCTCGGGTGTAAAATCAGAATAATGGCAGCATCTGTTGCATGGACTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGGGTGTAAAATCAGAATAATGGCAGCATCTGTTGCATGGACTAAC  200

seq1  TGCAG  205
      |||||
seq2  TGCAG  205