BAC Information

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BAC

Clone NameB6Ng01-251K09
Chromosome11 (Build37)
Map Location 55,282,000 - 55,452,276
singlet/doubletdoublet
Overlap geneG3bp, Glra1
Upstream geneFnip1, Rapgef6, Cdc42se2, LOC677786, LOC100041463, Lyrm7, Hint1, Gpx3, Tnip1, LOC667826, Anxa6, Ccdc69, Gm2a, LOC667832, Slc36a3, Slc36a2, Slc36a1, Fat2, Sparc, Atox1
Downstream geneNmur2, LOC100040816, LOC624168
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251K09.bB6Ng01-251K09.g
ACCGA058851GA058852
length1,0901,017
definitionB6Ng01-251K09.b B6Ng01-251K09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,451,194 - 55,452,276)(55,282,000 - 55,282,978)
sequence
gaattcaatccctagaacccacatttttaaaacagaaagccagtcatggc
agtgtgaacttataattccagcaatggggaggtagggacaggagaatcta
tgaggctcctgggccagccagcctgacctatgtggtaaactccaagcttc
acagtaaagtccagagatactgtctttgaaaagaaagtagatggtgcctg
aggaacaacatctgacactgacctctggccaaatcgaccaaggcagtgtg
cacatgcacctgcacgcacatgtatccgtgcatgtactcagacagtaaaa
acaaagctattcttctaagaccttattccactcaaggggcaacctgcata
ctactatcttacttaatccctatggcacccttaaatgtggctgctatcat
cacccccatacacaaagaaactgaatctagaagtgccaaacacctcacct
gagccatgcagatagtcagtggaggagcctgcctcctccggtaggtgtag
agaaagaccctgggaagcagaaccagtttttgttcctcttccagcagctg
tttaatggtggcgatgccagaatccttgctttgaacaggggggcaatcta
gagggccagggagatttgcattgtgtgagttctcctttcctttaacttga
agataggaggtggggctggaaacatctaggtccagacctttgacagtgat
gtccatcccaaatcaatctgtctttcttggcccccagatccaactgaaac
tcaccagaaccaccttgtcattaagaattatggagactgggaagggggac
aacatttgaaatgtaaataaatgaaataaccaataataaaaagaagaccc
tgtgctcaatgttagccttaccacttggggatcccttaggctctctatgc
ctgaggctgatctgcaaagtgaggccatgctcaggtctcctccacagggg
aagactgcttcccacctccaagcaggcaatgaacaaatgttagattctaa
ccctttgcaccctgccaagatttccccccatcttccaagggttcagaagc
tcattggccagtgaactgcaaccacgattcagccaattcc
gaattctccctgcctccagggaacacagactagtctagtttgtgtttagc
atttggatcacagctcttaatataaaatgctcatggtggccagaaggctc
acaaaacccccccgagttggggtcagcagcagactgaggtactactattt
ggaccctggagcctttatgggggaaccttaggcgtgtctgcctaggagtt
gggtaaagttcccatttcagtttgaaaagcatgtgaaaatggctggtggt
gacgcatcctataactttcgccagccagagggtgatcaaagatgggatgt
tgtctctgcaatcacaagattggaaaacctgaaaacgtccaggagccacc
cgggcacgccagcttggaagccacccgggaacaagagcattcccaaacgc
cagggaggctgcctcgcggtatgctctggggtgccgaccaagccagtttc
gctgtcctcggtcgccactgcattcgtgaggagtaatgctaagggtcagc
agctcctgctcttccgaaatgcatgcaaaaaaagttttgatgcgaagaga
aaaaaaccaaaccaaaaaaacaaaacccgggaaactgtttacttagatcc
cgggtaccagagtcgcctgggaaggcgggagaccggtcctcgaggacagg
attcaacctaagaggaagagaaaggaaagggaacggaagacgcagctagt
ccatcctcttaactcgcttccagagggcacggcggccctggggctgcctt
ttggagagggccatccctccctgtcaatcagcttccatttcggttgttgc
gatttggctgggggcttctcttgctcctcccgcccgcgcctaccttccct
agtttgccatgggagtttacttcccccaaaagtacaactgggcccccacc
tttggtggattcaacccgctcctgccttggacagtgggttttccgcccca
ttaaaaagataatgtaaagccaatggaaaaccgggtgcatgccaactaat
ttggctttgtcttgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_55451194_55452276
seq2: B6Ng01-251K09.b_49_1138 (reverse)

seq1  GGAATTGGCTG-ATCGTGGTTGCAGTTCACTGGCCAATGAGC-TCTGAAC  48
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  GGAATTGGCTGAATCGTGGTTGCAGTTCACTGGCCAATGAGCTTCTGAAC  50

seq1  C--TGGAAGAT-GGGGGAAATCTTGGCAGGGTGCAAA-GGTTAGAATCTA  94
      |  |||||||| ||||||||||||||||||||||||| ||||||||||||
seq2  CCTTGGAAGATGGGGGGAAATCTTGGCAGGGTGCAAAGGGTTAGAATCTA  100

seq1  ACATTTGTTCATTGCCTGCTTGGA-GTGGGAAGCAGTCTTCCCCTGTGGA  143
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACATTTGTTCATTGCCTGCTTGGAGGTGGGAAGCAGTCTTCCCCTGTGGA  150

seq1  GGAGACCTGAGCATGGCCTCACTTTGCAGATCAGCCTCAGGCATAGAGAG  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCTGAGCATGGCCTCACTTTGCAGATCAGCCTCAGGCATAGAGAG  200

seq1  CCTAAGGGATCCCCAAGTGGTAAGGCTAACATTGAGCACAGGGTCTTCTT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGGGATCCCCAAGTGGTAAGGCTAACATTGAGCACAGGGTCTTCTT  250

seq1  TTTATTATTGGTTATTTCATTTATTTACATTTCAAATGTTGTCCCCCTTC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTGGTTATTTCATTTATTTACATTTCAAATGTTGTCCCCCTTC  300

seq1  CCAGTCTCCATAATTCTTAATGACAAGGTGGTTCTGGTGAGTTTCAGTTG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTCCATAATTCTTAATGACAAGGTGGTTCTGGTGAGTTTCAGTTG  350

seq1  GATCTGGGGGCCAAGAAAGACAGATTGATTTGGGATGGACATCACTGTCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGGGGCCAAGAAAGACAGATTGATTTGGGATGGACATCACTGTCA  400

seq1  AAGGTCTGGACCTAGATGTTTCCAGCCCCACCTCCTATCTTCAAGTTAAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTGGACCTAGATGTTTCCAGCCCCACCTCCTATCTTCAAGTTAAA  450

seq1  GGAAAGGAGAACTCACACAATGCAAATCTCCCTGGCCCTCTAGATTGCCC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGAGAACTCACACAATGCAAATCTCCCTGGCCCTCTAGATTGCCC  500

seq1  CCCTGTTCAAAGCAAGGATTCTGGCATCGCCACCATTAAACAGCTGCTGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCAAAGCAAGGATTCTGGCATCGCCACCATTAAACAGCTGCTGG  550

seq1  AAGAGGAACAAAAACTGGTTCTGCTTCCCAGGGTCTTTCTCTACACCTAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAACAAAAACTGGTTCTGCTTCCCAGGGTCTTTCTCTACACCTAC  600

seq1  CGGAGGAGGCAGGCTCCTCCACTGACTATCTGCATGGCTCAGGTGAGGTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGAGGCAGGCTCCTCCACTGACTATCTGCATGGCTCAGGTGAGGTG  650

seq1  TTTGGCACTTCTAGATTCAGTTTCTTTGTGTATGGGGGTGATGATAGCAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCACTTCTAGATTCAGTTTCTTTGTGTATGGGGGTGATGATAGCAG  700

seq1  CCACATTTAAGGGTGCCATAGGGATTAAGTAAGATAGTAGTATGCAGGTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTAAGGGTGCCATAGGGATTAAGTAAGATAGTAGTATGCAGGTT  750

seq1  GCCCCTTGAGTGGAATAAGGTCTTAGAAGAATAGCTTTGTTTTTACTGTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTGAGTGGAATAAGGTCTTAGAAGAATAGCTTTGTTTTTACTGTC  800

seq1  TGAGTACATGCACGGATACATGTGCGTGCAGGTGCATGTGCACACTGCCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACATGCACGGATACATGTGCGTGCAGGTGCATGTGCACACTGCCT  850

seq1  TGGTCGATTTGGCCAGAGGTCAGTGTCAGATGTTGTTCCTCAGGCACCAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCGATTTGGCCAGAGGTCAGTGTCAGATGTTGTTCCTCAGGCACCAT  900

seq1  CTACTTTCTTTTCAAAGACAGTATCTCTGGACTTTACTGTGAAGCTTGGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCTTTTCAAAGACAGTATCTCTGGACTTTACTGTGAAGCTTGGA  950

seq1  GTTTACCACATAGGTCAGGCTGGCTGGCCCAGGAGCCTCATAGATTCTCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCACATAGGTCAGGCTGGCTGGCCCAGGAGCCTCATAGATTCTCC  1000

seq1  TGTCCCTACCTCCCCATTGCTGGAATTATAAGTTCACACTGCCATGACTG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTACCTCCCCATTGCTGGAATTATAAGTTCACACTGCCATGACTG  1050

seq1  GCTTTCTGTTTTAAAAATGTGGGTTCTAGGGATTGAATTC  1083
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTGTTTTAAAAATGTGGGTTCTAGGGATTGAATTC  1090

seq1: chr11_55282000_55282978
seq2: B6Ng01-251K09.g_70_1086

seq1  GAATTCTCCCTGCCTCCAGGGAACACAGACTAGTCTAGTTTGTGTTTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTGCCTCCAGGGAACACAGACTAGTCTAGTTTGTGTTTAGC  50

seq1  ATTTGGATCACAGCTCTTAATATAAAATGCTCATGGTGGCCAGAAGGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGATCACAGCTCTTAATATAAAATGCTCATGGTGGCCAGAAGGCTC  100

seq1  ACAAAACCCCCCCGAGTTGGGGTCAGCAGCAGACTGAGGTACTACTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCCCCCCGAGTTGGGGTCAGCAGCAGACTGAGGTACTACTATTT  150

seq1  GGACCCTGGAGCCTTTATGGGGGAACCTTAGGCGTGTCTGCCTAGGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCTGGAGCCTTTATGGGGGAACCTTAGGCGTGTCTGCCTAGGAGTT  200

seq1  GGGTAAAGTTCCCATTTCAGTTTGAAAAGCATGTGACAATGGCTGGTGGT  250
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGGTAAAGTTCCCATTTCAGTTTGAAAAGCATGTGAAAATGGCTGGTGGT  250

seq1  GACGCATCCTATAACTTTCGCCAGCCAGAGGGTGATCAAAGATGGGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCATCCTATAACTTTCGCCAGCCAGAGGGTGATCAAAGATGGGATGT  300

seq1  TGTCTCTGCAATCACAAGATTGGAAAACCTGAAAACGTCCAGGAGCCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGCAATCACAAGATTGGAAAACCTGAAAACGTCCAGGAGCCACC  350

seq1  CGGGCACGCCAGCTTGGAAGCCACCCGGGAACAAGAGCATTCCCAAACGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCACGCCAGCTTGGAAGCCACCCGGGAACAAGAGCATTCCCAAACGC  400

seq1  CAGGGAGGCTGCCTCGCGGTATGCTCTGGGGTGCCGACCAAGCCAGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGGCTGCCTCGCGGTATGCTCTGGGGTGCCGACCAAGCCAGTTTC  450

seq1  GCTGTCCTCGGTCGCCACTGCATTCGTGCTGAGTAATGCTAAGGGTCAGC  500
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  GCTGTCCTCGGTCGCCACTGCATTCGTGAGGAGTAATGCTAAGGGTCAGC  500

seq1  AGCTCCTGCTCTTCCGAAATGCATGCAAAAAAAGTTTTGATGCGAAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTGCTCTTCCGAAATGCATGCAAAAAAAGTTTTGATGCGAAGAGA  550

seq1  AAAAAACCAAACCAAAAAAACAAAACCCGGGAAACTG-TTACTTAGATCC  599
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAAAAACCAAACCAAAAAAACAAAACCCGGGAAACTGTTTACTTAGATCC  600

seq1  CGGGTACCAGAGTCGCCTGGGAAGGCGGGAGACCGGTCCTCGAGGACAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTACCAGAGTCGCCTGGGAAGGCGGGAGACCGGTCCTCGAGGACAGG  650

seq1  ATTCAACCTAAGAGGAAGAGAAAGGAAAGGGAACGGAAGACGCAGCTAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACCTAAGAGGAAGAGAAAGGAAAGGGAACGGAAGACGCAGCTAGT  700

seq1  CCATCCTCTTAAC-CGC-TCCAGAGGGCACGGCGGCCCTGGGGCTGCC-T  746
      ||||||||||||| ||| |||||||||||||||||||||||||||||| |
seq2  CCATCCTCTTAACTCGCTTCCAGAGGGCACGGCGGCCCTGGGGCTGCCTT  750

seq1  TTGGAGAGGGCCATCCCTCCCTGTCAATCAGC-TCCA-TTCGG-TGTTGC  793
      |||||||||||||||||||||||||||||||| |||| ||||| ||||||
seq2  TTGGAGAGGGCCATCCCTCCCTGTCAATCAGCTTCCATTTCGGTTGTTGC  800

seq1  GA-TTGGCTGGGGGCTTC-CTTGCTC--CCCGCCCGCGCCTACCT--CCT  837
      || ||||||||||||||| |||||||  |||||||||||||||||  |||
seq2  GATTTGGCTGGGGGCTTCTCTTGCTCCTCCCGCCCGCGCCTACCTTCCCT  850

seq1  AGTT--GCATGGG-GTTTACTTCCCC--AAAGTACA---CGGGCCCCACC  879
      ||||   |||||| ||||||||||||  ||||||||    || |||||||
seq2  AGTTTGCCATGGGAGTTTACTTCCCCCAAAAGTACAACTGGGCCCCCACC  900

seq1  TT--GTGGA-TCAA-CCGCTCCTGCC-TGGACAGTGGG-TTTCCGCCC--  921
      ||  ||||| |||| ||||||||||| ||||||||||| |||||||||  
seq2  TTTGGTGGATTCAACCCGCTCCTGCCTTGGACAGTGGGTTTTCCGCCCCA  950

seq1  AGAAAAAGA-AATGT-AAGCCAATG--AGAACGGGTGCATG-CAACTA--  964
        ||||||| ||||| |||||||||  | | |||||||||| ||||||  
seq2  TTAAAAAGATAATGTAAAGCCAATGGAAAACCGGGTGCATGCCAACTAAT  1000

seq1  TTGGC-TTGTC-TGAGT  979
      ||||| ||||| |||||
seq2  TTGGCTTTGTCTTGAGT  1017