BAC Information

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BAC

Clone NameB6Ng01-253I14
Chromosome11 (Build37)
Map Location 12,506,161 - 12,507,270
singlet/doubletsinglet
Overlap genenone
Upstream geneIkzf1, Fignl1, Ddc, Grb10, Cobl
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253I14.bB6Ng01-253I14.g
ACCGA060240GA060241
length1,1591,106
definitionB6Ng01-253I14.b B6Ng01-253I14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacagactatctctttttaaccttcctctacacacttctgtatc
ataacccctaactcaatcaggcatccccttctaaaccacaagccatgcct
gctaggaaaacagataggctgccagtggaccttttgctccttcttgcttc
ctcagacttagttccccagtcttatccctagttattcaacagaactctgg
cttcatctttccttcatccctgcccacatcttctgtagatcctataaagc
atctccttctaacctgcctcccccaaattgttgccttgttccagacccca
actccatcaagcacacccttctaacccaaggaccactccttccaggataa
caagtagactgcagacagactcacacctctcctactattcatgagatcca
aacaccccctactcttattcacagctctgtaataggaaatctgctgtggt
atccctttcatatctgaccctatccccaaaggatcacaattgcattctcc
tccaacctttatccttccaagttgtcctaggacctcaacctccaacacca
gtaggcatttcttctgaacacaccagcaggtcaggcctcaaaaacagaca
tcacactctccaaaaatcaagaaaggaaaccaaggaacagaatacccacc
caacaaaaaaaaaacatagaaaaattaccctaatctttaaaaaggagatg
cctacagaggtacaagaagcatacagaacaccaaaatagattgagatgga
aaagaaagcccccttaccacataatcatcaaaacactaaacttatagaac
aaaggaagaagatttaaaactccaaacagaagtgatgaacccaatgtacc
taatttacagaacatttcacccaaacataaaagaatataccttcttttca
gcacctcatggaactttgcccaatattaccacacttgcacacaaccaaat
ctcaagagacaaataaaattgaaataactctctgaccatcagaccaccat
gggtagagctgatatcatcacacagaaatagagaaagtacgactcataga
aactgaacatttttatagaatgaaaatggtcaaccgacttaacggaaaaa
acttaaacttcggaattccaatgaactgaatatacagcatactcaacctt
atgggagca
gaattcagcttgttatttcatgacaatatataaatctgtaaggcaaacat
tagtaaataattttcctaaaagataaatgagaagtagagttgtatgtaga
tgagagcaagcccggtaaggcagtatgtggcaggtatgttttccctggat
ggtaaaccagatatgggctttggcttccttaaagaccttttaatagccta
actcatatttcattgctcttagtagcatcttgattggatttgttttttat
ggtgggtaagcaaaaccttcttctgaaaggtttgattgtcttggtaattg
ttttcaaatgctatacttttaatattaccattagatgccctttgttgtgt
tgggaaatattatagcacctcttagatattatgatgttcctccttgatgt
tcagaattagtcattccaggggctattgtagccctttgttttgataagac
accaatctccagtgtcatatgttttacacagttttagcctccattttgat
ggattctgttggtcgattgaagtaattttcccctctggtccaaaatgtcc
agactgtcagagaccagaattaaagtatcaaatggggcccaaagaaggta
aattcaaagactgtttccatctgttcctcctgatgctagacatttacttc
ctgaatcattgaaagagaaaggaattatccctttcatggatttttttaat
ggatagtaaatgtcctaatagattggtcacaggggtattctaggctgcct
gtggtagcattagtatatacctggcgtctatttctgaattgtctactttt
tgcattaaagtatatagatacttttgaagatgaatgattcatcatccttt
gggaaagactaagaagatctatagtttgtgatactttggtatcagtaggt
tcctgaaccaaaaggagataattttttttagagacttctgtttcttaaaa
tcatctctagtatattatcctacctgtactatagtatactgtggtgttta
ggaggtaatgacaagaaatagtctatccatgttcagtagagaccacattt
cttcagccaaatattttaatcttcagtgatggattgggaccatgtaatat
ccatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12506161_12507270
seq2: B6Ng01-253I14.g_64_1169

seq1  GAATTCAGCTTGTTATTTCATGACAATATATAAATCTGTAAGGCAAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTGTTATTTCATGACAATATATAAATCTGTAAGGCAAACAT  50

seq1  TAGTAAATAATTTTCCTAAAAGATAAATGAGAAGTAGAGTTGTATGTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAATAATTTTCCTAAAAGATAAATGAGAAGTAGAGTTGTATGTAGA  100

seq1  TGAGAGCAAGCCCGGTAAGGCAGTATGTGGCAGGTATGTTTTCCCTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCAAGCCCGGTAAGGCAGTATGTGGCAGGTATGTTTTCCCTGGAT  150

seq1  GGTAAACCAGATATGGGCTTTGGCTTCCTTAAAGACCTTTTAATAGCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACCAGATATGGGCTTTGGCTTCCTTAAAGACCTTTTAATAGCCTA  200

seq1  ACTCATATTTCATTGCTCTTAGTAGCATCTTGATTGGATTTGTTTTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATATTTCATTGCTCTTAGTAGCATCTTGATTGGATTTGTTTTTTAT  250

seq1  GGTGGGTAAGCAAAACCTTCTTCTGAAAGGTTTGATTGTCTTGGTAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTAAGCAAAACCTTCTTCTGAAAGGTTTGATTGTCTTGGTAATTG  300

seq1  TTTTCAAATGCTATACTTTTAATATTACCATTAGATGCCCTTTGTTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAATGCTATACTTTTAATATTACCATTAGATGCCCTTTGTTGTGT  350

seq1  TGGGAAATATTATAGCACCTCTTAGATATTATGATGTTCCTCCTTGATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAATATTATAGCACCTCTTAGATATTATGATGTTCCTCCTTGATGT  400

seq1  TCAGAATTAGTCATTCCAGGGGCTATTGTAGCCCTTTGTTTTGATAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATTAGTCATTCCAGGGGCTATTGTAGCCCTTTGTTTTGATAAGAC  450

seq1  ACCAATCTCCAGTGTCATATGTTTTACACAGTTTTAGCCTCCATTTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCTCCAGTGTCATATGTTTTACACAGTTTTAGCCTCCATTTTGAT  500

seq1  GGATTCTGTTGGTCGATTGAAGTAATTTTCCCCTCTGGTCCAAAATGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTGTTGGTCGATTGAAGTAATTTTCCCCTCTGGTCCAAAATGTCC  550

seq1  AGACTGTCAGAGACCAGAATTAAAGTATCAAATGGGGCCCAAAGAAGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTCAGAGACCAGAATTAAAGTATCAAATGGGGCCCAAAGAAGGTA  600

seq1  AATTCAAAGACTGTTTCCATCTGTTCCTCCTGATGCTAGACATTTACTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAAGACTGTTTCCATCTGTTCCTCCTGATGCTAGACATTTACTTC  650

seq1  CTGAATCATTGAAAGAGAAAGGAATTATCCCTTTCATGGATTTTTTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCATTGAAAGAGAAAGGAATTATCCCTTTCATGGATTTTTTTAAT  700

seq1  GGATAGTAAATGTCCTAATAGATTGGTCACAGGGGTATTCTAGGCTGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTAAATGTCCTAATAGATTGGTCACAGGGGTATTCTAGGCTGCCT  750

seq1  GTGGTAGCATTAGTATATACCTGGCGTCTATTTCTGAATTGTCTACTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAGCATTAGTATATACCTGGCGTCTATTTCTGAATTGTCTACTTTT  800

seq1  TGCATTAAAGTATATAGATACTTTTGAAGATGAATGATTCATCATCCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAAAGTATATAGATACTTTTGAAGATGAATGATTCATCATCCTTT  850

seq1  GGGAAAGACTAAGAAGATCTATAGTTTGTGATACTTTGGTATCAGTAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGACTAAGAAGATCTATAGTTTGTGATACTTTGGTATCAGTAGGT  900

seq1  TCCTGAACCAAAAGGAGATAATTTTTTTTAGAGACTTCTGTTTCTTAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAACCAAAAGGAGATAATTTTTTTTAGAGACTTCTGTTTCTTAAAA  950

seq1  TCATCTCTAGTATATTTATCCTACCTGTACTATAGTATACTGTGGTGTTT  1000
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCATCTCTAGTATA-TTATCCTACCTGTACTATAGTATACTGTGGTGTTT  999

seq1  AGGAGGGTAATGACAAGGAAATAGTCTATCCATGTTCAGTAGAGACACAA  1050
      |||| ||||||||||| |||||||||||||||||||||||||||||   |
seq2  AGGA-GGTAATGACAA-GAAATAGTCTATCCATGTTCAGTAGAGACCACA  1047

seq1  TTTCTTCAG-CAAATATTTTAAATCTTCAGTTGATTGAATTTGGA-CATG  1098
      ||||||||| |||||||||| ||||||||| ||| || ||| ||| ||||
seq2  TTTCTTCAGCCAAATATTTT-AATCTTCAG-TGA-TGGATTGGGACCATG  1094

seq1  TAATATCCATAT  1110
      ||||||||||||
seq2  TAATATCCATAT  1106